Wall clock time and date at job start Thu Apr 8 2021 14:25:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13604 * 1 3 3 C 1.47192 * 179.97438 * 2 1 4 4 C 1.53001 * 109.47276 * 288.34191 * 3 2 1 5 5 N 1.46499 * 109.46793 * 65.42802 * 4 3 2 6 6 C 1.46503 * 119.99958 * 237.79790 * 5 4 3 7 7 C 1.50703 * 109.47170 * 263.71048 * 6 5 4 8 8 C 1.38434 * 119.85107 * 84.96395 * 7 6 5 9 9 Br 1.89098 * 119.93460 * 0.02635 * 8 7 6 10 10 C 1.38057 * 120.12668 * 179.97438 * 8 7 6 11 11 C 1.39601 * 119.84156 * 0.02562 * 10 8 7 12 12 C 1.43190 * 120.14793 * 180.02562 * 11 10 8 13 13 N 9.57080 * 110.94891 * 119.18173 * 3 1 2 14 14 C 1.39656 * 119.70474 * 359.97438 * 11 10 8 15 15 C 1.37939 * 119.86819 * 359.72278 * 14 11 10 16 16 C 1.34776 * 120.00345 * 57.79866 * 5 4 3 17 17 O 1.21276 * 120.00178 * 184.69234 * 16 5 4 18 18 C 1.50702 * 119.99680 * 4.69765 * 16 5 4 19 19 C 1.53001 * 109.46718 * 233.93214 * 18 16 5 20 20 Si 1.86299 * 109.46850 * 180.02562 * 19 18 16 21 21 H 1.48493 * 109.47205 * 60.00007 * 20 19 18 22 22 H 1.48506 * 109.47101 * 180.02562 * 20 19 18 23 23 H 1.48500 * 109.47038 * 299.99820 * 20 19 18 24 24 C 1.52993 * 109.47317 * 185.42535 * 4 3 2 25 25 F 1.39897 * 109.47455 * 0.90508 * 24 4 3 26 26 F 1.39908 * 109.47045 * 120.90312 * 24 4 3 27 27 F 1.39901 * 109.47512 * 240.90324 * 24 4 3 28 28 H 1.08998 * 109.47095 * 168.34627 * 3 2 1 29 29 H 1.09001 * 109.47251 * 48.34316 * 3 2 1 30 30 H 1.09004 * 109.47054 * 305.43141 * 4 3 2 31 31 H 1.09006 * 109.47025 * 23.71047 * 6 5 4 32 32 H 1.09003 * 109.47515 * 143.71109 * 6 5 4 33 33 H 1.08003 * 120.07985 * 179.97438 * 10 8 7 34 34 H 1.07997 * 120.06670 * 180.02562 * 14 11 10 35 35 H 1.07999 * 119.92064 * 180.27131 * 15 14 11 36 36 H 1.09003 * 109.46871 * 353.93059 * 18 16 5 37 37 H 1.08992 * 109.47063 * 113.93360 * 18 16 5 38 38 H 1.09002 * 109.47264 * 300.00119 * 19 18 16 39 39 H 1.09000 * 109.47006 * 60.00012 * 19 18 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 6 3.1182 -0.4530 1.3692 5 7 2.7401 -1.8507 1.5926 6 6 1.9312 -2.2132 2.7590 7 6 2.8342 -2.6846 3.8697 8 6 3.4157 -1.7627 4.7231 9 35 3.0744 0.0829 4.4927 10 6 4.2434 -2.1883 5.7428 11 6 4.4936 -3.5513 5.9114 12 6 5.3506 -4.0000 6.9671 13 7 6.0288 4.3596 -7.8037 14 6 3.9034 -4.4754 5.0465 15 6 3.0733 -4.0373 4.0356 16 6 3.1363 -2.8030 0.7251 17 8 2.7533 -3.9455 0.8622 18 6 4.0554 -2.4480 -0.4153 19 6 3.4318 -2.9073 -1.7347 20 14 4.5683 -2.4693 -3.1444 21 1 5.8767 -3.1450 -2.9536 22 1 3.9627 -2.9144 -4.4252 23 1 4.7710 -0.9985 -3.1781 24 6 4.6420 -0.3236 1.4142 25 9 5.1026 0.1896 0.1970 26 9 5.0061 0.5407 2.4523 27 9 5.2107 -1.5826 1.6345 28 1 2.9708 1.0073 -0.2076 29 1 2.9716 -0.6822 -0.7678 30 1 2.6773 0.1713 2.1464 31 1 1.3666 -1.3431 3.0943 32 1 1.2408 -3.0121 2.4884 33 1 4.6970 -1.4683 6.4079 34 1 4.0925 -5.5312 5.1718 35 1 2.6130 -4.7515 3.3690 36 1 4.2038 -1.3684 -0.4398 37 1 5.0160 -2.9437 -0.2754 38 1 3.2833 -3.9869 -1.7102 39 1 2.4711 -2.4116 -1.8745 RHF calculation, no. of doubly occupied orbitals= 64 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_275550_18168296_18168442_13179792.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Apr 8 2021 14:25:41 Heat of formation + Delta-G solvation = 349.147730 kcal Electronic energy + Delta-G solvation = -33098.686148 eV Core-core repulsion = 28158.487798 eV Total energy + Delta-G solvation = -4940.198350 eV No. of doubly occupied orbitals = 64 Molecular weight (most abundant/longest-lived isotopes) = 417.017 amu Computer time = 3.09 seconds Orbital eigenvalues (eV) -51.39809 -48.78027 -48.73347 -41.59529 -39.48848 -38.44147 -37.00388 -34.91012 -33.30763 -32.97324 -31.85409 -30.03065 -28.65697 -28.56189 -27.99137 -25.38034 -24.06360 -23.19361 -23.02789 -20.92424 -20.33593 -19.71074 -19.52132 -19.13679 -18.44580 -17.70977 -17.37586 -16.87469 -16.25434 -16.01747 -15.87228 -15.64364 -15.40204 -15.27675 -15.24907 -15.06976 -15.02504 -14.94568 -14.80553 -14.68003 -14.57467 -14.44811 -14.13685 -14.05436 -13.69773 -13.53509 -13.34417 -13.07210 -12.93816 -12.79561 -12.68109 -12.11133 -11.99447 -11.80080 -11.76055 -11.69005 -11.51638 -11.12454 -10.82336 -10.30205 -10.04871 -9.99511 -9.56622 -6.43248 -5.06963 -5.06931 0.49297 0.57814 0.86520 0.91370 1.17105 1.36459 1.42405 1.62782 1.66308 1.68550 1.80075 1.82969 2.18951 2.41176 2.80470 2.92968 2.95725 3.09485 3.40240 3.56079 3.66646 3.73380 3.95743 4.02992 4.13230 4.20555 4.22775 4.32574 4.43179 4.45371 4.54046 4.75551 4.82282 5.00774 5.10194 5.30555 5.41797 5.54043 5.73158 5.81322 5.98328 6.12840 6.42427 6.48430 6.98001 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.462 5.462 2 C 0.231 3.769 3 C -0.054 4.054 4 C 0.080 3.920 5 N -0.601 5.601 6 C 0.192 3.808 7 C -0.296 4.296 8 C 0.018 3.982 9 Br -0.055 7.055 10 C -0.264 4.264 11 C -0.185 4.185 12 C -0.227 4.227 13 N 1.000 4.000 14 C -0.297 4.297 15 C -0.012 4.012 16 C 0.518 3.482 17 O -0.562 6.562 18 C -0.156 4.156 19 C -0.369 4.369 20 Si 1.013 2.987 21 H -0.286 1.286 22 H -0.264 1.264 23 H -0.212 1.212 24 C 0.440 3.560 25 F -0.152 7.152 26 F -0.170 7.170 27 F -0.183 7.183 28 H 0.196 0.804 29 H 0.152 0.848 30 H 0.148 0.852 31 H 0.088 0.912 32 H 0.069 0.931 33 H 0.089 0.911 34 H 0.075 0.925 35 H 0.100 0.900 36 H 0.112 0.888 37 H 0.106 0.894 38 H 0.079 0.921 39 H 0.098 0.902 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 11.916 41.616 -65.757 78.726 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.139 5.139 2 C -0.087 4.087 3 C -0.093 4.093 4 C -0.028 4.028 5 N -0.333 5.333 6 C 0.071 3.929 7 C -0.299 4.299 8 C -0.061 4.061 9 Br 0.031 6.969 10 C -0.284 4.284 11 C -0.186 4.186 12 C -0.228 4.228 13 N 1.000 4.000 14 C -0.316 4.316 15 C -0.031 4.031 16 C 0.309 3.691 17 O -0.440 6.440 18 C -0.195 4.195 19 C -0.457 4.457 20 Si 0.835 3.165 21 H -0.212 1.212 22 H -0.188 1.188 23 H -0.133 1.133 24 C 0.384 3.616 25 F -0.133 7.133 26 F -0.151 7.151 27 F -0.165 7.165 28 H 0.213 0.787 29 H 0.169 0.831 30 H 0.166 0.834 31 H 0.107 0.893 32 H 0.087 0.913 33 H 0.107 0.893 34 H 0.094 0.906 35 H 0.118 0.882 36 H 0.130 0.870 37 H 0.124 0.876 38 H 0.098 0.902 39 H 0.117 0.883 Dipole moment (debyes) X Y Z Total from point charges 10.357 41.952 -66.525 79.328 hybrid contribution -0.299 -1.106 0.618 1.302 sum 10.057 40.846 -65.907 78.188 Atomic orbital electron populations 1.81330 1.14119 1.10023 1.08397 1.28733 0.94702 0.92219 0.92999 1.20584 0.82228 1.10755 0.95780 1.22901 0.89511 0.86883 1.03542 1.48372 1.53732 1.05841 1.25399 1.19912 0.90538 1.00190 0.82250 1.18763 1.14329 0.91852 1.04950 1.21133 0.99187 0.88144 0.97637 1.96292 1.95076 1.09036 1.96523 1.19550 1.11137 0.92848 1.04873 1.21133 1.01406 0.95281 1.00746 1.81855 1.19488 0.15436 1.05990 2.00000 0.63334 0.73339 0.63328 1.19775 1.11586 0.96101 1.04092 1.20403 0.93883 0.94962 0.93892 1.21447 0.80203 0.84428 0.83067 1.90676 1.56930 1.21367 1.74985 1.22335 0.99368 1.04876 0.92900 1.25615 1.09701 1.06620 1.03786 0.84499 0.75680 0.82091 0.74253 1.21158 1.18784 1.13303 1.20772 0.92178 0.74102 0.74543 1.93117 1.90630 1.86642 1.42956 1.93299 1.93183 1.69968 1.58686 1.93264 1.86847 1.41758 1.94599 0.78685 0.83078 0.83441 0.89348 0.91283 0.89305 0.90647 0.88155 0.87025 0.87565 0.90219 0.88335 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 48. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.46 -4.88 18.54 20.00 0.37 -4.51 16 2 C 0.23 0.73 15.15 89.44 1.36 2.08 16 3 C -0.05 0.23 4.06 28.79 0.12 0.35 16 4 C 0.08 0.56 1.86 44.99 0.08 0.65 16 5 N -0.60 -9.99 1.78 -802.13 -1.43 -11.42 16 6 C 0.19 4.67 5.05 85.63 0.43 5.10 16 7 C -0.30 -10.11 5.41 -19.79 -0.11 -10.22 16 8 C 0.02 0.63 6.21 22.27 0.14 0.77 16 9 Br -0.06 -1.20 26.36 -20.37 -0.54 -1.74 16 10 C -0.26 -11.39 9.49 22.56 0.21 -11.17 16 11 C -0.18 -8.95 5.73 -21.36 -0.12 -9.07 16 12 C -0.23 -10.91 25.13 69.06 1.74 -9.17 16 13 N 1.00 -76.36 30.19 37.02 1.12 -75.24 16 14 C -0.30 -13.86 9.76 22.54 0.22 -13.64 16 15 C -0.01 -0.49 9.52 22.23 0.21 -0.27 16 16 C 0.52 9.20 5.75 87.66 0.50 9.71 16 17 O -0.56 -15.52 15.93 -3.02 -0.05 -15.57 16 18 C -0.16 -0.98 2.34 29.85 0.07 -0.91 16 19 C -0.37 -0.18 3.87 71.98 0.28 0.10 16 20 Si 1.01 -6.96 29.30 68.60 2.01 -4.95 16 21 H -0.29 0.41 7.11 99.48 0.71 1.11 16 22 H -0.26 1.62 7.11 99.48 0.71 2.33 16 23 H -0.21 3.03 7.11 99.48 0.71 3.74 16 24 C 0.44 3.47 2.77 71.98 0.20 3.67 16 25 F -0.15 0.44 13.93 44.97 0.63 1.07 16 26 F -0.17 -1.97 14.86 44.97 0.67 -1.30 16 27 F -0.18 -3.17 13.30 44.97 0.60 -2.57 16 28 H 0.20 -3.12 7.65 -2.39 -0.02 -3.13 16 29 H 0.15 -1.13 3.70 -2.39 -0.01 -1.14 16 30 H 0.15 1.14 4.84 -2.38 -0.01 1.13 16 31 H 0.09 1.84 6.52 -2.38 -0.02 1.82 16 32 H 0.07 1.87 7.46 -2.39 -0.02 1.85 16 33 H 0.09 3.77 8.06 -2.91 -0.02 3.74 16 34 H 0.08 3.51 8.06 -2.91 -0.02 3.49 16 35 H 0.10 3.92 7.71 -2.91 -0.02 3.90 16 36 H 0.11 -0.06 1.72 -2.39 0.00 -0.07 16 37 H 0.11 0.82 7.58 -2.39 -0.02 0.81 16 38 H 0.08 0.43 7.82 -2.39 -0.02 0.41 16 39 H 0.10 -0.30 7.43 -2.39 -0.02 -0.32 16 Total: 0.00 -139.22 376.19 10.63 -128.59 By element: Atomic # 1 Polarization: 17.75 SS G_CDS: 1.92 Total: 19.67 kcal Atomic # 6 Polarization: -37.35 SS G_CDS: 5.33 Total: -32.02 kcal Atomic # 7 Polarization: -91.23 SS G_CDS: 0.06 Total: -91.17 kcal Atomic # 8 Polarization: -15.52 SS G_CDS: -0.05 Total: -15.57 kcal Atomic # 9 Polarization: -4.70 SS G_CDS: 1.89 Total: -2.80 kcal Atomic # 14 Polarization: -6.96 SS G_CDS: 2.01 Total: -4.95 kcal Atomic # 35 Polarization: -1.20 SS G_CDS: -0.54 Total: -1.74 kcal Total: -139.22 10.63 -128.59 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_275550_18168296_18168442_13179792.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 477.735 kcal (2) G-P(sol) polarization free energy of solvation -139.220 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 338.515 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 10.633 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -128.587 kcal (6) G-S(sol) free energy of system = (1) + (5) 349.148 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 3.09 seconds