Wall clock time and date at job start Thu Apr 8 2021 11:26:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.21283 * 1 3 3 C 1.50700 * 119.99803 * 2 1 4 Xx 1.80997 * 109.47151 * 359.97438 * 3 2 1 5 4 F 4.17178 * 69.38129 * 0.02562 * 2 1 3 6 5 F 1.60998 * 90.00425 * 224.99882 * 4 3 2 7 6 F 1.61006 * 90.00080 * 45.00098 * 4 3 2 8 7 F 1.60999 * 89.99917 * 315.00002 * 4 3 2 9 8 F 1.61006 * 90.00087 * 134.99751 * 4 3 2 10 9 N 1.34777 * 120.00463 * 179.72122 * 2 1 3 11 10 C 1.46497 * 119.99525 * 0.02562 * 10 2 1 12 11 C 1.52999 * 109.46992 * 179.97438 * 11 10 2 13 12 C 1.52998 * 109.47306 * 180.02562 * 12 11 10 14 13 C 1.52568 * 108.51404 * 170.23562 * 13 12 11 15 14 C 1.50887 * 109.35675 * 206.26864 * 14 13 12 16 15 C 1.53949 * 110.09700 * 268.10952 * 15 14 13 17 16 N 1.47604 * 112.13720 * 40.56171 * 16 15 14 18 17 C 1.34778 * 118.64174 * 222.15224 * 17 16 15 19 18 O 1.21280 * 119.99878 * 180.02562 * 18 17 16 20 19 C 1.50699 * 119.99928 * 0.02562 * 18 17 16 21 20 C 1.52996 * 109.46717 * 180.02562 * 20 18 17 22 21 Si 1.86303 * 109.47019 * 180.02562 * 21 20 18 23 22 H 1.48505 * 109.47159 * 179.97438 * 22 21 20 24 23 H 1.48502 * 109.46862 * 299.99580 * 22 21 20 25 24 H 1.48497 * 109.47102 * 59.99762 * 22 21 20 26 25 C 1.44580 * 122.71206 * 42.13571 * 17 16 15 27 26 C 1.47097 * 108.51456 * 294.99940 * 13 12 11 28 27 H 1.09009 * 109.47352 * 119.99681 * 3 2 1 29 28 H 1.08998 * 109.47585 * 239.99969 * 3 2 1 30 29 H 0.97000 * 119.99894 * 179.97438 * 10 2 1 31 30 H 1.08995 * 109.47421 * 299.99467 * 11 10 2 32 31 H 1.09001 * 109.47621 * 60.00103 * 11 10 2 33 32 H 1.09009 * 109.47378 * 299.99899 * 12 11 10 34 33 H 1.08993 * 109.47209 * 59.99808 * 12 11 10 35 34 H 1.09000 * 108.45005 * 52.69214 * 13 12 11 36 35 H 1.08997 * 109.49299 * 326.23391 * 14 13 12 37 36 H 1.09000 * 109.49230 * 86.30570 * 14 13 12 38 37 H 1.09006 * 109.36513 * 28.30424 * 15 14 13 39 38 H 1.09005 * 109.36358 * 147.91298 * 15 14 13 40 39 H 1.08991 * 108.94591 * 161.24778 * 16 15 14 41 40 H 1.09002 * 108.94389 * 279.87910 * 16 15 14 42 41 H 1.09000 * 109.47446 * 299.99894 * 20 18 17 43 42 H 1.09002 * 109.46923 * 60.00072 * 20 18 17 44 43 H 1.09009 * 109.47515 * 299.99727 * 21 20 18 45 44 H 1.08994 * 109.47611 * 60.00384 * 21 20 18 46 45 H 1.09003 * 109.44883 * 29.30801 * 26 17 16 47 46 H 1.08999 * 109.44775 * 149.22761 * 26 17 16 48 47 H 1.08995 * 109.32439 * 296.20722 * 27 13 12 49 48 H 1.08997 * 109.32605 * 55.68069 * 27 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.2128 0.0000 0.0000 3 6 1.9663 1.3051 0.0000 4 9 -0.2562 3.9046 0.0017 5 9 1.6557 3.4205 -1.1390 6 9 -0.0757 1.9413 1.1376 7 9 -0.0747 1.9407 -1.1394 8 9 1.6549 3.4209 1.1379 9 7 1.8868 -1.1671 0.0057 10 6 1.1543 -2.4358 0.0113 11 6 2.1486 -3.5987 0.0164 12 6 1.3837 -4.9237 0.0216 13 6 2.3763 -6.0571 -0.2187 14 6 1.6582 -7.2261 -0.8467 15 6 1.1607 -8.1901 0.2456 16 7 0.6173 -7.4724 1.4154 17 6 0.9258 -7.9202 2.6486 18 8 0.4924 -7.3495 3.6270 19 6 1.8093 -9.1301 2.8117 20 6 2.0008 -9.4247 4.3008 21 14 3.0936 -10.9199 4.5026 22 1 3.2800 -11.2055 5.9480 23 1 2.4584 -12.0897 3.8443 24 1 4.4140 -10.6561 3.8764 25 6 -0.2319 -6.3087 1.2929 26 6 0.6392 -5.0283 1.2860 27 1 2.5930 1.3630 0.8901 28 1 2.5930 1.3630 -0.8899 29 1 2.8568 -1.1670 0.0053 30 1 0.5274 -2.4895 0.9013 31 1 0.5280 -2.4978 -0.8787 32 1 2.7753 -3.5449 -0.8739 33 1 2.7752 -3.5370 0.9061 34 1 0.6687 -4.9126 -0.8011 35 1 3.1657 -5.7136 -0.8872 36 1 2.8126 -6.3661 0.7312 37 1 0.8071 -6.8610 -1.4217 38 1 2.3411 -7.7548 -1.5118 39 1 0.3811 -8.8267 -0.1726 40 1 1.9915 -8.8170 0.5695 41 1 1.3425 -9.9887 2.3290 42 1 2.7784 -8.9370 2.3516 43 1 2.4674 -8.5662 4.7840 44 1 1.0316 -9.6179 4.7605 45 1 -0.7971 -6.3682 0.3628 46 1 -0.9226 -6.2732 2.1353 47 1 1.3433 -5.0665 2.1171 48 1 -0.0026 -4.1547 1.4001 RHF calculation, no. of doubly occupied orbitals= 69 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. SCF OSCILLATION -- NSTAR INDEX INCREASED BY ONE CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_275592_15865388_15845322_18081600.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Apr 8 2021 11:26:22 Heat of formation + Delta-G solvation = 273.177432 kcal Electronic energy + Delta-G solvation = -34124.812415 eV Core-core repulsion = 28577.094545 eV Total energy + Delta-G solvation = -5547.717870 eV No. of doubly occupied orbitals = 69 Molecular weight (most abundant/longest-lived isotopes) = 364.170 amu Computer time = 23.77 seconds Orbital eigenvalues (eV) -44.30140 -44.13892 -43.93871 -43.84799 -43.24067 -41.54220 -41.18784 -39.20891 -36.97018 -35.45274 -33.99722 -33.33016 -31.98705 -29.91455 -27.71942 -26.27140 -24.92026 -23.31941 -22.25334 -22.23077 -20.99974 -19.59148 -18.88149 -18.19076 -17.58641 -17.55213 -17.18830 -16.93657 -15.96290 -15.73406 -15.68854 -15.59831 -15.13583 -15.07125 -14.91844 -14.85348 -14.63299 -14.55227 -14.46284 -14.15874 -14.10963 -14.02308 -14.00295 -13.79058 -13.65010 -13.64061 -13.54720 -13.38436 -13.35054 -13.22289 -13.19093 -12.72100 -12.39065 -12.34627 -12.28274 -12.13638 -12.03249 -11.82424 -11.68896 -11.66481 -11.62756 -11.49912 -11.44415 -11.31987 -11.28267 -11.07639 -10.63181 -10.47628 -9.58251 -5.05413 -4.58444 -2.83374 0.83118 1.12881 1.49649 1.64656 1.67265 1.69152 2.03011 2.26390 2.83808 3.05700 3.14987 3.57594 3.66261 3.81895 3.87655 4.01161 4.04476 4.17003 4.19693 4.23278 4.29476 4.41007 4.49910 4.57949 4.60663 4.70127 4.76653 4.77594 4.88079 4.94784 4.98421 5.01841 5.08578 5.14223 5.19385 5.29582 5.35686 5.38979 5.42466 5.53583 5.76907 5.90789 6.40879 6.61722 7.25867 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.515 6.515 2 C 0.459 3.541 3 C 0.376 3.624 4 F -0.243 7.243 5 F -0.186 7.186 6 F -0.135 7.135 7 F -0.130 7.130 8 F -0.191 7.191 9 N -0.681 5.681 10 C 0.115 3.885 11 C -0.120 4.120 12 C -0.080 4.080 13 C -0.108 4.108 14 C -0.131 4.131 15 C 0.095 3.905 16 N -0.604 5.604 17 C 0.501 3.499 18 O -0.587 6.587 19 C -0.136 4.136 20 C -0.337 4.337 21 Si 1.014 2.986 22 H -0.291 1.291 23 H -0.269 1.269 24 H -0.262 1.262 25 C 0.112 3.888 26 C -0.125 4.125 27 H 0.247 0.753 28 H 0.250 0.750 29 H 0.434 0.566 30 H 0.063 0.937 31 H 0.071 0.929 32 H 0.099 0.901 33 H 0.080 0.920 34 H 0.076 0.924 35 H 0.084 0.916 36 H 0.056 0.944 37 H 0.069 0.931 38 H 0.095 0.905 39 H 0.073 0.927 40 H 0.103 0.897 41 H 0.117 0.883 42 H 0.123 0.877 43 H 0.079 0.921 44 H 0.076 0.924 45 H 0.089 0.911 46 H 0.053 0.947 47 H 0.050 0.950 48 H 0.071 0.929 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 13.512 -12.271 -5.942 19.195 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.392 6.392 2 C 0.243 3.757 3 C 0.333 3.667 4 F -0.243 7.243 5 F -0.184 7.184 6 F -0.134 7.134 7 F -0.129 7.129 8 F -0.190 7.190 9 N -0.337 5.337 10 C -0.007 4.007 11 C -0.157 4.157 12 C -0.099 4.099 13 C -0.145 4.145 14 C -0.169 4.169 15 C -0.026 4.026 16 N -0.336 5.336 17 C 0.291 3.709 18 O -0.467 6.467 19 C -0.175 4.175 20 C -0.429 4.429 21 Si 0.843 3.157 22 H -0.216 1.216 23 H -0.194 1.194 24 H -0.187 1.187 25 C -0.012 4.012 26 C -0.164 4.164 27 H 0.263 0.737 28 H 0.266 0.734 29 H 0.275 0.725 30 H 0.082 0.918 31 H 0.089 0.911 32 H 0.117 0.883 33 H 0.099 0.901 34 H 0.094 0.906 35 H 0.102 0.898 36 H 0.074 0.926 37 H 0.087 0.913 38 H 0.114 0.886 39 H 0.092 0.908 40 H 0.121 0.879 41 H 0.135 0.865 42 H 0.141 0.859 43 H 0.098 0.902 44 H 0.094 0.906 45 H 0.107 0.893 46 H 0.072 0.928 47 H 0.068 0.932 48 H 0.090 0.910 Dipole moment (debyes) X Y Z Total from point charges 12.971 -12.793 -5.388 18.998 hybrid contribution -1.079 1.180 0.385 1.645 sum 11.892 -11.613 -5.002 17.358 Atomic orbital electron populations 1.91080 1.15127 1.85704 1.47253 1.20757 0.89432 0.86154 0.79370 1.32575 0.61829 0.54447 1.17803 1.99999 1.63379 1.60917 1.99995 1.99919 1.39737 1.83223 1.95561 1.99920 1.76851 1.39185 1.97432 1.99920 1.76223 1.39161 1.97546 1.99918 1.39872 1.83705 1.95472 1.45599 1.12182 1.02718 1.73215 1.21771 0.95595 0.80583 1.02747 1.21963 0.97509 0.91455 1.04790 1.20043 0.97572 0.94759 0.97557 1.21117 0.97749 0.94471 1.01200 1.21781 1.01205 0.96795 0.97139 1.22338 0.99898 0.94665 0.85697 1.47895 1.49561 1.29683 1.06453 1.21405 0.80927 0.86032 0.82507 1.90689 1.55429 1.60710 1.39907 1.21602 1.01262 0.96350 0.98268 1.25088 1.08764 1.11270 0.97814 0.84366 0.77508 0.75485 0.78385 1.21640 1.19359 1.18660 1.21390 0.92703 0.84941 1.02164 1.21256 0.99227 0.97456 0.98428 0.73673 0.73353 0.72517 0.91838 0.91067 0.88274 0.90087 0.90583 0.89750 0.92558 0.91269 0.88609 0.90821 0.87929 0.86499 0.85937 0.90179 0.90551 0.89315 0.92832 0.93165 0.91031 Number of geometries 1 Number of calculations of the screened coulomb radii 3 The total number of SCF iterations 378. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 -2.55 12.46 -3.04 -0.04 -2.59 16 2 C 0.46 -4.64 7.15 87.66 0.63 -4.01 16 3 C 0.38 -6.18 5.47 71.24 0.39 -5.79 16 4 F -0.24 -6.17 16.66 44.97 0.75 -5.42 16 5 F -0.19 -1.57 15.88 44.97 0.71 -0.85 16 6 F -0.14 -1.92 13.70 44.97 0.62 -1.30 16 7 F -0.13 -1.75 13.72 44.97 0.62 -1.13 16 8 F -0.19 -1.72 15.87 44.97 0.71 -1.01 16 9 N -0.68 12.28 5.56 -463.07 -2.57 9.71 16 10 C 0.12 -1.45 5.38 86.38 0.46 -0.99 16 11 C -0.12 1.97 4.66 30.59 0.14 2.11 16 12 C -0.08 0.98 1.67 -12.77 -0.02 0.95 16 13 C -0.11 1.43 4.93 29.76 0.15 1.58 16 14 C -0.13 1.80 5.71 30.23 0.17 1.97 16 15 C 0.10 -1.07 5.95 86.49 0.51 -0.56 16 16 N -0.60 2.54 2.24 -818.19 -1.83 0.70 16 17 C 0.50 0.46 7.62 87.66 0.67 1.13 16 18 O -0.59 -6.39 15.42 -3.03 -0.05 -6.44 16 19 C -0.14 0.81 3.40 29.85 0.10 0.91 16 20 C -0.34 0.92 3.74 71.98 0.27 1.19 16 21 Si 1.01 -3.91 29.30 68.60 2.01 -1.90 16 22 H -0.29 -0.36 7.11 99.48 0.71 0.35 16 23 H -0.27 0.70 7.11 99.48 0.71 1.41 16 24 H -0.26 0.99 7.11 99.48 0.71 1.69 16 25 C 0.11 -0.31 5.38 87.37 0.47 0.16 16 26 C -0.13 0.75 4.82 29.39 0.14 0.89 16 27 H 0.25 -7.05 7.65 -2.38 -0.02 -7.06 16 28 H 0.25 -7.31 7.65 -2.39 -0.02 -7.33 16 29 H 0.43 -12.27 8.47 -92.71 -0.79 -13.05 16 30 H 0.06 -0.49 6.39 -2.39 -0.02 -0.50 16 31 H 0.07 -0.69 8.14 -2.39 -0.02 -0.71 16 32 H 0.10 -2.00 7.82 -2.38 -0.02 -2.02 16 33 H 0.08 -1.36 8.13 -2.39 -0.02 -1.38 16 34 H 0.08 -0.91 7.33 -2.39 -0.02 -0.93 16 35 H 0.08 -1.34 7.64 -2.39 -0.02 -1.36 16 36 H 0.06 -0.58 7.48 -2.39 -0.02 -0.59 16 37 H 0.07 -0.89 7.31 -2.38 -0.02 -0.91 16 38 H 0.10 -1.54 8.14 -2.38 -0.02 -1.56 16 39 H 0.07 -0.87 8.14 -2.39 -0.02 -0.89 16 40 H 0.10 -1.51 5.82 -2.39 -0.01 -1.52 16 41 H 0.12 -1.20 7.85 -2.39 -0.02 -1.22 16 42 H 0.12 -1.42 7.24 -2.39 -0.02 -1.44 16 43 H 0.08 -0.07 7.92 -2.38 -0.02 -0.09 16 44 H 0.08 0.01 7.92 -2.39 -0.02 -0.01 16 45 H 0.09 -0.53 8.06 -2.39 -0.02 -0.55 16 46 H 0.05 0.20 7.30 -2.39 -0.02 0.18 16 47 H 0.05 -0.09 8.14 -2.39 -0.02 -0.11 16 48 H 0.07 -0.37 6.13 -2.39 -0.01 -0.38 16 Total: 0.00 -56.64 394.68 5.97 -50.66 By element: Atomic # 1 Polarization: -40.94 SS G_CDS: 0.96 Total: -39.98 kcal Atomic # 6 Polarization: -4.53 SS G_CDS: 4.09 Total: -0.45 kcal Atomic # 7 Polarization: 14.82 SS G_CDS: -4.40 Total: 10.41 kcal Atomic # 8 Polarization: -8.94 SS G_CDS: -0.08 Total: -9.02 kcal Atomic # 9 Polarization: -13.13 SS G_CDS: 3.41 Total: -9.72 kcal Atomic # 14 Polarization: -3.91 SS G_CDS: 2.01 Total: -1.90 kcal Total: -56.64 5.97 -50.66 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_275592_15865388_15845322_18081600.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 323.838 kcal (2) G-P(sol) polarization free energy of solvation -56.636 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 267.203 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 5.975 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -50.661 kcal (6) G-S(sol) free energy of system = (1) + (5) 273.177 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 23.77 seconds