Wall clock time and date at job start Wed Apr 14 2021 09:39:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34770 * 1 3 3 O 1.21581 * 120.00154 * 2 1 4 4 N 1.34777 * 119.99889 * 180.02562 * 2 1 3 5 5 C 1.46498 * 120.00220 * 179.97438 * 4 2 1 6 6 C 1.53781 * 113.61483 * 107.49811 * 5 4 2 7 7 C 1.53786 * 87.07897 * 89.12202 * 6 5 4 8 8 C 1.53778 * 87.08111 * 25.43113 * 7 6 5 9 9 N 1.46494 * 113.61638 * 139.98185 * 7 6 5 10 10 C 1.46500 * 120.00177 * 125.42718 * 9 7 6 11 11 C 1.50700 * 109.47003 * 86.35350 * 10 9 7 12 12 C 1.38211 * 120.00407 * 275.12840 * 11 10 9 13 13 C 1.38256 * 120.00218 * 179.97438 * 12 11 10 14 14 C 1.38206 * 120.00094 * 359.97438 * 13 12 11 15 15 C 1.38260 * 120.00206 * 359.97156 * 14 13 12 16 16 C 1.38215 * 119.99756 * 359.81981 * 15 14 13 17 Xx 1.81004 * 119.99856 * 179.97438 * 13 12 11 18 17 F 8.34600 * 82.14768 * 191.77342 * 2 1 3 19 18 F 1.60998 * 89.99931 * 135.00184 * 17 13 12 20 19 F 1.60998 * 90.00069 * 315.00184 * 17 13 12 21 20 F 1.61004 * 89.99897 * 225.00244 * 17 13 12 22 21 F 1.60999 * 89.99806 * 45.00327 * 17 13 12 23 22 C 1.34778 * 120.00271 * 305.42992 * 9 7 6 24 23 O 1.21282 * 119.99423 * 4.31109 * 23 9 7 25 24 C 1.50695 * 120.00332 * 184.31631 * 23 9 7 26 25 C 1.53002 * 109.47290 * 183.63537 * 25 23 9 27 26 Si 1.86298 * 109.47041 * 180.02562 * 26 25 23 28 27 H 1.48505 * 109.47088 * 299.99430 * 27 26 25 29 28 H 1.48500 * 109.47744 * 59.99926 * 27 26 25 30 29 H 1.48503 * 109.46843 * 179.97438 * 27 26 25 31 30 H 0.96998 * 120.00294 * 359.97438 * 1 2 3 32 31 H 0.97004 * 120.00434 * 179.72714 * 1 2 3 33 32 H 0.97003 * 120.00137 * 359.97438 * 4 2 1 34 33 H 1.08999 * 112.84679 * 336.19706 * 5 4 2 35 34 H 1.09001 * 113.61371 * 203.66342 * 6 5 4 36 35 H 1.08998 * 113.61523 * 334.57351 * 6 5 4 37 36 H 1.09002 * 113.61480 * 270.88750 * 7 6 5 38 37 H 1.08997 * 113.61744 * 220.01711 * 8 7 6 39 38 H 1.09002 * 113.61656 * 89.12212 * 8 7 6 40 39 H 1.09004 * 109.47400 * 206.35425 * 10 9 7 41 40 H 1.09000 * 109.47441 * 326.35555 * 10 9 7 42 41 H 1.08004 * 119.99869 * 359.97438 * 12 11 10 43 42 H 1.08005 * 120.00278 * 179.97438 * 14 13 12 44 43 H 1.07997 * 120.00290 * 179.97438 * 15 14 13 45 44 H 1.07996 * 120.00188 * 180.02562 * 16 15 14 46 45 H 1.09002 * 109.47446 * 303.63453 * 25 23 9 47 46 H 1.09005 * 109.47276 * 63.63545 * 25 23 9 48 47 H 1.09000 * 109.47164 * 299.99919 * 26 25 23 49 48 H 1.08992 * 109.47021 * 59.99576 * 26 25 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3477 0.0000 0.0000 3 8 1.9556 1.0529 0.0000 4 7 2.0216 -1.1672 -0.0005 5 6 3.4865 -1.1673 -0.0011 6 6 4.1031 -1.5913 1.3424 7 6 4.0498 -3.0370 0.8209 8 6 4.1023 -2.4442 -0.5971 9 7 5.2310 -3.8305 1.1693 10 6 5.0750 -5.1069 1.8713 11 6 4.8462 -6.2074 0.8675 12 6 3.5715 -6.4593 0.3965 13 6 3.3617 -7.4687 -0.5247 14 6 4.4268 -8.2255 -0.9751 15 6 5.7022 -7.9729 -0.5049 16 6 5.9126 -6.9610 0.4128 17 9 0.2075 -8.0938 -1.6870 18 9 2.2659 -7.8986 -2.6419 19 9 1.1184 -7.6991 0.3600 20 9 1.9320 -9.3787 -0.9442 21 9 1.4523 -6.2191 -1.3376 22 6 6.4612 -3.3863 0.8442 23 8 6.5962 -2.2944 0.3337 24 6 7.6688 -4.2461 1.1149 25 6 8.9370 -3.4772 0.7391 26 14 10.4298 -4.5405 1.0730 27 1 10.4738 -4.8932 2.5149 28 1 10.3450 -5.7817 0.2622 29 1 11.6607 -3.7944 0.7077 30 1 -0.4850 0.8400 0.0004 31 1 -0.4851 -0.8400 -0.0040 32 1 1.5366 -2.0073 -0.0005 33 1 3.9096 -0.2482 -0.4064 34 1 5.1162 -1.2192 1.4947 35 1 3.4519 -1.4114 2.1978 36 1 3.1138 -3.5482 1.0459 37 1 3.4506 -2.9528 -1.3074 38 1 5.1152 -2.3052 -0.9750 39 1 5.9778 -5.3194 2.4440 40 1 4.2216 -5.0482 2.5468 41 1 2.7392 -5.8676 0.7482 42 1 4.2629 -9.0143 -1.6945 43 1 6.5345 -8.5645 -0.8565 44 1 6.9088 -6.7634 0.7799 45 1 7.7009 -4.5047 2.1733 46 1 7.6067 -5.1574 0.5200 47 1 8.9050 -3.2186 -0.3193 48 1 8.9991 -2.5660 1.3339 RHF calculation, no. of doubly occupied orbitals= 74 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. SCF OSCILLATION -- NSTAR INDEX INCREASED BY ONE SCF OSCILLATION -- NSTAR INDEX INCREASED BY ONE SCF OSCILLATION -- NSTAR INDEX INCREASED BY ONE CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_275550_18174744_18164856_13179792.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Wed Apr 14 2021 09:39:46 Heat of formation + Delta-G solvation = 366.314339 kcal Electronic energy + Delta-G solvation = -40080.025560 eV Core-core repulsion = 34113.553555 eV Total energy + Delta-G solvation = -5966.472005 eV No. of doubly occupied orbitals = 74 Molecular weight (most abundant/longest-lived isotopes) = 399.149 amu Computer time = 58.93 seconds Orbital eigenvalues (eV) -44.58559 -44.30375 -43.86946 -43.73840 -43.52250 -42.15985 -41.13593 -40.57118 -38.76792 -36.60544 -35.00649 -33.88004 -33.26145 -32.42181 -32.25590 -27.63704 -26.77725 -26.67430 -24.25337 -23.80876 -22.94529 -22.66116 -21.08110 -19.78479 -19.38751 -18.48313 -18.07266 -17.78540 -17.46794 -16.94927 -16.82548 -16.22181 -16.16048 -15.89810 -15.55543 -15.49552 -15.33694 -15.22428 -15.17136 -14.92643 -14.83815 -14.71751 -14.65475 -14.54298 -14.29866 -14.22536 -14.03993 -13.96073 -13.75227 -13.59136 -13.48352 -13.35771 -13.31626 -13.27098 -13.15079 -13.07776 -12.86447 -12.74809 -12.50280 -12.15776 -12.06495 -11.91342 -11.82561 -11.62204 -11.52047 -11.46163 -11.28518 -11.09221 -10.79922 -10.70640 -10.64312 -10.36131 -10.03931 -9.74832 -5.26132 -4.82270 -2.94649 -0.64618 -0.45681 1.58259 1.67153 1.72436 1.79982 1.81927 1.84211 2.06908 2.14811 2.36158 2.73957 2.99602 3.40105 3.42920 3.50939 3.54403 3.58622 3.63326 3.73299 3.87411 3.95379 4.01856 4.14003 4.21836 4.32044 4.42298 4.45751 4.57645 4.65430 4.72572 4.75738 4.82052 4.84482 4.89179 4.95786 5.00481 5.02226 5.10869 5.16286 5.42799 5.55094 5.70432 5.81478 5.96332 6.39092 7.00655 7.26077 7.57635 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.850 5.850 2 C 0.699 3.301 3 O -0.648 6.648 4 N -0.715 5.715 5 C 0.134 3.866 6 C -0.150 4.150 7 C 0.135 3.865 8 C -0.151 4.151 9 N -0.600 5.600 10 C 0.137 3.863 11 C -0.046 4.046 12 C -0.108 4.108 13 C 0.343 3.657 14 C -0.121 4.121 15 C -0.035 4.035 16 C -0.079 4.079 17 F -0.081 7.081 18 F -0.259 7.259 19 F -0.211 7.211 20 F -0.120 7.120 21 F -0.207 7.207 22 C 0.511 3.489 23 O -0.559 6.559 24 C -0.144 4.144 25 C -0.337 4.337 26 Si 1.003 2.997 27 H -0.262 1.262 28 H -0.249 1.249 29 H -0.307 1.307 30 H 0.420 0.580 31 H 0.414 0.586 32 H 0.412 0.588 33 H 0.070 0.930 34 H 0.090 0.910 35 H 0.071 0.929 36 H 0.133 0.867 37 H 0.073 0.927 38 H 0.106 0.894 39 H 0.157 0.843 40 H 0.124 0.876 41 H 0.176 0.824 42 H 0.177 0.823 43 H 0.221 0.779 44 H 0.212 0.788 45 H 0.137 0.863 46 H 0.129 0.871 47 H 0.079 0.921 48 H 0.077 0.923 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 9.829 -8.024 7.953 14.975 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.418 5.418 2 C 0.397 3.603 3 O -0.530 6.530 4 N -0.371 5.371 5 C 0.027 3.973 6 C -0.190 4.190 7 C 0.031 3.969 8 C -0.190 4.190 9 N -0.331 5.331 10 C 0.015 3.985 11 C -0.048 4.048 12 C -0.126 4.126 13 C 0.339 3.661 14 C -0.138 4.138 15 C -0.052 4.052 16 C -0.096 4.096 17 F -0.081 7.081 18 F -0.258 7.258 19 F -0.209 7.209 20 F -0.119 7.119 21 F -0.206 7.206 22 C 0.302 3.698 23 O -0.437 6.437 24 C -0.183 4.183 25 C -0.430 4.430 26 Si 0.831 3.169 27 H -0.186 1.186 28 H -0.173 1.173 29 H -0.234 1.234 30 H 0.253 0.747 31 H 0.245 0.755 32 H 0.248 0.752 33 H 0.088 0.912 34 H 0.109 0.891 35 H 0.090 0.910 36 H 0.150 0.850 37 H 0.091 0.909 38 H 0.124 0.876 39 H 0.174 0.826 40 H 0.142 0.858 41 H 0.193 0.807 42 H 0.194 0.806 43 H 0.237 0.763 44 H 0.229 0.771 45 H 0.155 0.845 46 H 0.146 0.854 47 H 0.098 0.902 48 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges 11.301 -7.186 7.883 15.540 hybrid contribution -2.994 0.122 -1.166 3.215 sum 8.307 -7.063 6.717 12.807 Atomic orbital electron populations 1.42847 1.04113 1.13907 1.80968 1.16228 0.82975 0.83993 0.77082 1.90955 1.69158 1.32511 1.60370 1.44636 1.06265 1.07088 1.79106 1.21398 0.78536 0.99161 0.98177 1.23731 1.01941 0.96399 0.96889 1.22664 0.89465 0.90492 0.94290 1.23756 1.02900 0.94832 0.97551 1.48043 1.05497 1.20919 1.58667 1.21183 1.09041 0.77553 0.90677 1.20807 0.86467 0.98685 0.98837 1.21894 0.99859 0.95609 0.95250 1.27545 0.40080 1.01936 0.96532 1.22339 0.86812 1.01822 1.02862 1.22091 0.90806 0.97646 0.94677 1.22467 1.01777 0.91883 0.93516 1.99966 1.48890 1.61637 1.97635 1.99929 1.86057 1.70602 1.69202 1.99932 1.93288 1.48833 1.78890 1.99950 1.87698 1.96718 1.27529 1.99912 1.69285 1.53028 1.98391 1.21454 0.84684 0.86983 0.76646 1.90701 1.86040 1.23280 1.43641 1.21893 0.90117 0.99531 1.06757 1.25046 1.05307 1.06614 1.06000 0.84534 0.74814 0.77785 0.79728 1.18595 1.17251 1.23355 0.74746 0.75532 0.75155 0.91168 0.89133 0.90994 0.84959 0.90868 0.87589 0.82554 0.85773 0.80700 0.80630 0.76270 0.77144 0.84502 0.85350 0.90238 0.90409 Number of geometries 1 Number of calculations of the screened coulomb radii 10 The total number of SCF iterations 743. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.85 1.25 8.88 -184.76 -1.64 -0.39 16 2 C 0.70 4.96 8.84 179.06 1.58 6.54 16 3 O -0.65 -12.05 16.78 -3.97 -0.07 -12.12 16 4 N -0.71 -0.51 5.27 -455.31 -2.40 -2.91 16 5 C 0.13 0.41 4.32 45.52 0.20 0.61 16 6 C -0.15 0.15 7.24 31.12 0.23 0.38 16 7 C 0.13 -1.08 4.28 45.52 0.20 -0.88 16 8 C -0.15 0.25 7.11 31.12 0.22 0.47 16 9 N -0.60 7.89 2.71 -799.22 -2.16 5.73 16 10 C 0.14 -2.99 5.37 85.63 0.46 -2.53 16 11 C -0.05 0.91 5.46 -19.86 -0.11 0.80 16 12 C -0.11 1.24 8.30 22.27 0.18 1.43 16 13 C 0.34 -1.51 4.82 22.27 0.11 -1.40 16 14 C -0.12 1.41 8.62 22.27 0.19 1.60 16 15 C -0.04 0.78 10.05 22.27 0.22 1.00 16 16 C -0.08 1.93 8.92 22.27 0.20 2.13 16 17 F -0.08 -1.64 16.65 44.97 0.75 -0.89 16 18 F -0.26 -3.80 15.31 44.97 0.69 -3.11 16 19 F -0.21 -2.37 15.31 44.97 0.69 -1.68 16 20 F -0.12 -1.33 15.31 44.97 0.69 -0.64 16 21 F -0.21 -2.55 15.31 44.97 0.69 -1.86 16 22 C 0.51 -4.57 7.10 87.66 0.62 -3.95 16 23 O -0.56 -0.86 11.67 -3.04 -0.04 -0.90 16 24 C -0.14 2.46 3.71 29.85 0.11 2.57 16 25 C -0.34 3.64 3.75 71.98 0.27 3.91 16 26 Si 1.00 -10.76 29.30 68.60 2.01 -8.75 16 27 H -0.26 2.69 7.11 99.48 0.71 3.40 16 28 H -0.25 3.11 7.11 99.48 0.71 3.82 16 29 H -0.31 0.74 7.11 99.48 0.71 1.45 16 30 H 0.42 -0.93 8.93 -92.71 -0.83 -1.76 16 31 H 0.41 -3.37 8.84 -92.70 -0.82 -4.19 16 32 H 0.41 -2.40 8.72 -92.71 -0.81 -3.21 16 33 H 0.07 0.79 7.46 -2.39 -0.02 0.77 16 34 H 0.09 0.31 6.30 -2.39 -0.02 0.30 16 35 H 0.07 -0.08 8.14 -2.39 -0.02 -0.10 16 36 H 0.13 -1.68 7.95 -2.39 -0.02 -1.70 16 37 H 0.07 -0.14 8.14 -2.39 -0.02 -0.16 16 38 H 0.11 0.28 5.63 -2.39 -0.01 0.26 16 39 H 0.16 -4.58 6.14 -2.38 -0.01 -4.59 16 40 H 0.12 -2.96 8.08 -2.39 -0.02 -2.98 16 41 H 0.18 -1.95 7.28 -2.91 -0.02 -1.97 16 42 H 0.18 -1.81 7.40 -2.91 -0.02 -1.83 16 43 H 0.22 -6.46 8.06 -2.91 -0.02 -6.49 16 44 H 0.21 -6.90 6.11 -2.91 -0.02 -6.92 16 45 H 0.14 -3.32 6.89 -2.39 -0.02 -3.33 16 46 H 0.13 -3.12 5.14 -2.38 -0.01 -3.13 16 47 H 0.08 -0.61 7.88 -2.39 -0.02 -0.63 16 48 H 0.08 -0.58 7.95 -2.39 -0.02 -0.60 16 Total: 0.00 -51.69 412.74 3.27 -48.42 By element: Atomic # 1 Polarization: -32.95 SS G_CDS: -0.62 Total: -33.57 kcal Atomic # 6 Polarization: 7.98 SS G_CDS: 4.68 Total: 12.66 kcal Atomic # 7 Polarization: 8.64 SS G_CDS: -6.20 Total: 2.43 kcal Atomic # 8 Polarization: -12.91 SS G_CDS: -0.10 Total: -13.01 kcal Atomic # 9 Polarization: -11.69 SS G_CDS: 3.50 Total: -8.18 kcal Atomic # 14 Polarization: -10.76 SS G_CDS: 2.01 Total: -8.75 kcal Total: -51.69 3.27 -48.42 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_275550_18174744_18164856_13179792.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 414.735 kcal (2) G-P(sol) polarization free energy of solvation -51.687 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 363.047 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 3.267 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -48.420 kcal (6) G-S(sol) free energy of system = (1) + (5) 366.314 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 58.93 seconds