Wall clock time and date at job start Wed Apr 14 2021 13:38:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53006 * 1 3 3 C 1.50697 * 109.46998 * 2 1 4 4 N 1.31071 * 126.65911 * 77.96518 * 3 2 1 5 5 N 1.28842 * 107.99020 * 179.97438 * 4 3 2 6 6 N 1.28737 * 109.39583 * 0.02562 * 5 4 3 7 7 N 1.29017 * 108.80883 * 359.74450 * 6 5 4 8 8 C 1.46506 * 126.43550 * 180.02562 * 7 6 5 9 9 N 1.46504 * 109.46626 * 119.99889 * 2 1 3 10 10 C 1.46502 * 120.00138 * 306.15626 * 9 2 1 11 11 C 1.50693 * 109.47249 * 96.59198 * 10 9 2 12 12 C 1.38210 * 120.00137 * 263.70330 * 11 10 9 13 13 C 1.38257 * 120.00211 * 179.97438 * 12 11 10 14 14 C 1.38215 * 119.99744 * 359.97438 * 13 12 11 15 15 C 1.38251 * 120.00250 * 359.97004 * 14 13 12 16 Xx 1.81001 * 120.00396 * 179.97438 * 15 14 13 17 16 F 8.33656 * 81.32615 * 138.92581 * 2 1 3 18 17 F 1.61000 * 89.99884 * 315.00559 * 16 15 14 19 18 F 1.60997 * 90.00296 * 135.00096 * 16 15 14 20 19 F 1.61008 * 89.99719 * 45.00312 * 16 15 14 21 20 F 1.60995 * 90.00461 * 225.00391 * 16 15 14 22 21 C 1.38213 * 120.00069 * 359.81889 * 15 14 13 23 22 C 1.34775 * 119.99812 * 126.15809 * 9 2 1 24 23 O 1.21283 * 120.00138 * 185.75419 * 23 9 2 25 24 C 1.50698 * 119.99970 * 5.76033 * 23 9 2 26 25 C 1.53001 * 109.47168 * 183.99358 * 25 23 9 27 26 Si 1.86293 * 109.47330 * 179.97438 * 26 25 23 28 27 H 1.48501 * 109.47542 * 59.99398 * 27 26 25 29 28 H 1.48505 * 109.47271 * 179.97438 * 27 26 25 30 29 H 1.48499 * 109.47307 * 299.99379 * 27 26 25 31 30 H 1.09004 * 109.46906 * 187.82052 * 1 2 3 32 31 H 1.08995 * 109.47184 * 307.82401 * 1 2 3 33 32 H 1.09000 * 109.46947 * 67.82210 * 1 2 3 34 33 H 1.08993 * 109.47269 * 239.99483 * 2 1 3 35 34 H 1.09002 * 109.46830 * 89.97622 * 8 7 6 36 35 H 1.09000 * 109.46473 * 209.97007 * 8 7 6 37 36 H 1.08994 * 109.47391 * 329.97200 * 8 7 6 38 37 H 1.08994 * 109.46779 * 216.59732 * 10 9 2 39 38 H 1.09005 * 109.46687 * 336.59107 * 10 9 2 40 39 H 1.07997 * 120.00047 * 359.97438 * 12 11 10 41 40 H 1.07999 * 120.00187 * 179.97438 * 13 12 11 42 41 H 1.08003 * 120.00144 * 179.97438 * 14 13 12 43 42 H 1.08002 * 120.00290 * 179.97438 * 22 15 14 44 43 H 1.09007 * 109.46914 * 303.98275 * 25 23 9 45 44 H 1.08999 * 109.47557 * 63.98609 * 25 23 9 46 45 H 1.09008 * 109.46907 * 299.99756 * 26 25 23 47 46 H 1.08999 * 109.47493 * 59.99212 * 26 25 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 6 2.0324 1.4208 0.0000 4 7 2.0865 2.2317 1.0283 5 7 2.5749 3.3537 0.6251 6 7 2.8332 3.2797 -0.6339 7 7 2.5172 2.1018 -1.0549 8 6 2.6527 1.6022 -2.4254 9 7 2.0183 -0.6906 1.1963 10 6 1.5567 -0.2735 2.5226 11 6 0.4164 -1.1571 2.9585 12 6 -0.8890 -0.7460 2.7660 13 6 -1.9352 -1.5569 3.1654 14 6 -1.6755 -2.7789 3.7567 15 6 -0.3697 -3.1906 3.9482 16 9 0.2728 -6.2127 5.4148 17 9 -1.1412 -4.4828 5.8464 18 9 1.0819 -5.0985 3.5999 19 9 -1.1544 -5.4775 3.7984 20 9 1.0951 -4.1037 5.6479 21 6 0.6761 -2.3820 3.5450 22 6 2.8922 -1.7097 1.0765 23 8 3.2161 -2.3489 2.0550 24 6 3.4668 -2.0548 -0.2731 25 6 4.3456 -3.3012 -0.1497 26 14 5.0554 -3.7284 -1.8183 27 1 5.8739 -2.5926 -2.3137 28 1 5.9089 -4.9377 -1.6983 29 1 3.9498 -3.9952 -2.7730 30 1 -0.3633 -1.0182 0.1398 31 1 -0.3633 0.6302 0.8117 32 1 -0.3633 0.3879 -0.9516 33 1 1.8934 -0.5139 -0.8899 34 1 3.6353 1.1473 -2.5508 35 1 1.8804 0.8576 -2.6186 36 1 2.5432 2.4296 -3.1263 37 1 2.3762 -0.3594 3.2360 38 1 1.2185 0.7619 2.4805 39 1 -1.0919 0.2087 2.3036 40 1 -2.9553 -1.2355 3.0154 41 1 -2.4927 -3.4122 4.0691 42 1 1.6962 -2.7034 3.6949 43 1 2.6554 -2.2506 -0.9742 44 1 4.0676 -1.2211 -0.6363 45 1 5.1571 -3.1055 0.5515 46 1 3.7448 -4.1350 0.2135 RHF calculation, no. of doubly occupied orbitals= 73 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. SCF OSCILLATION -- NSTAR INDEX INCREASED BY ONE SCF OSCILLATION -- NSTAR INDEX INCREASED BY ONE SCF OSCILLATION -- NSTAR INDEX INCREASED BY ONE CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_275550_18179352_18164856_13179792.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Wed Apr 14 2021 13:38:10 Heat of formation + Delta-G solvation = 496.268790 kcal Electronic energy + Delta-G solvation = -39993.096785 eV Core-core repulsion = 34091.864258 eV Total energy + Delta-G solvation = -5901.232527 eV No. of doubly occupied orbitals = 73 Molecular weight (most abundant/longest-lived isotopes) = 397.140 amu Computer time = 56.15 seconds Orbital eigenvalues (eV) -45.23985 -44.38913 -44.23904 -44.19244 -44.09072 -43.52132 -41.86832 -40.58297 -37.96700 -36.64400 -34.64595 -33.78607 -32.80949 -32.48969 -31.32942 -29.22529 -28.22609 -25.73220 -24.98595 -24.34422 -23.90872 -22.94432 -22.55705 -20.13126 -18.69433 -18.46574 -18.30290 -18.22477 -17.39131 -17.14521 -16.92697 -16.06119 -15.83305 -15.69426 -15.32277 -15.26945 -15.24664 -15.02387 -14.97213 -14.77671 -14.65409 -14.54159 -14.39559 -14.23583 -14.17301 -14.11219 -14.01102 -13.91714 -13.89431 -13.68374 -13.66643 -13.62014 -13.56407 -13.48117 -13.17015 -13.04801 -12.96302 -12.69128 -12.43121 -12.31059 -12.26431 -12.12433 -11.98774 -11.93053 -11.81716 -11.62659 -11.54560 -11.40131 -11.19744 -10.95513 -10.74296 -10.51872 -10.21726 -5.25618 -4.80035 -3.05033 -0.70378 -0.49874 0.18912 1.02231 1.14415 1.43902 1.48302 1.60626 1.67959 1.71209 2.05434 2.20478 2.67162 2.78683 2.99520 3.21121 3.33850 3.48376 3.58374 3.60716 3.70773 3.83793 3.93972 3.97070 4.15863 4.20536 4.21982 4.30875 4.33483 4.43602 4.54999 4.62544 4.64262 4.65613 4.70299 4.81328 4.84413 4.85836 4.92303 4.95360 5.11614 5.13277 5.21278 5.34569 5.39724 6.08265 6.99361 7.54069 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.175 4.175 2 C 0.218 3.782 3 C 0.170 3.830 4 N -0.315 5.315 5 N -0.113 5.113 6 N -0.110 5.110 7 N -0.289 5.289 8 C 0.048 3.952 9 N -0.600 5.600 10 C 0.152 3.848 11 C -0.042 4.042 12 C -0.069 4.069 13 C -0.027 4.027 14 C -0.109 4.109 15 C 0.318 3.682 16 F -0.224 7.224 17 F -0.162 7.162 18 F -0.153 7.153 19 F -0.157 7.157 20 F -0.173 7.173 21 C -0.108 4.108 22 C 0.512 3.488 23 O -0.559 6.559 24 C -0.142 4.142 25 C -0.343 4.343 26 Si 1.007 2.993 27 H -0.261 1.261 28 H -0.302 1.302 29 H -0.248 1.248 30 H 0.099 0.901 31 H 0.078 0.922 32 H 0.105 0.895 33 H 0.161 0.839 34 H 0.120 0.880 35 H 0.151 0.849 36 H 0.116 0.884 37 H 0.080 0.920 38 H 0.143 0.857 39 H 0.211 0.789 40 H 0.232 0.768 41 H 0.184 0.816 42 H 0.158 0.842 43 H 0.143 0.857 44 H 0.123 0.877 45 H 0.074 0.926 46 H 0.078 0.922 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.676 10.913 -16.720 21.391 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.234 4.234 2 C 0.111 3.889 3 C -0.110 4.110 4 N -0.165 5.165 5 N -0.107 5.107 6 N -0.097 5.097 7 N -0.091 5.091 8 C -0.091 4.091 9 N -0.332 5.332 10 C 0.029 3.971 11 C -0.043 4.043 12 C -0.086 4.086 13 C -0.044 4.044 14 C -0.127 4.127 15 C 0.314 3.686 16 F -0.224 7.224 17 F -0.160 7.160 18 F -0.151 7.151 19 F -0.156 7.156 20 F -0.171 7.171 21 C -0.126 4.126 22 C 0.303 3.697 23 O -0.436 6.436 24 C -0.181 4.181 25 C -0.434 4.434 26 Si 0.835 3.165 27 H -0.185 1.185 28 H -0.229 1.229 29 H -0.171 1.171 30 H 0.118 0.882 31 H 0.097 0.903 32 H 0.124 0.876 33 H 0.178 0.822 34 H 0.138 0.862 35 H 0.169 0.831 36 H 0.134 0.866 37 H 0.098 0.902 38 H 0.160 0.840 39 H 0.227 0.773 40 H 0.248 0.752 41 H 0.201 0.799 42 H 0.176 0.824 43 H 0.161 0.839 44 H 0.141 0.859 45 H 0.092 0.908 46 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges -6.813 11.653 -16.448 21.278 hybrid contribution 0.932 -2.346 1.323 2.850 sum -5.881 9.307 -15.125 18.707 Atomic orbital electron populations 1.22618 0.88994 1.05649 1.06090 1.20154 0.97708 0.80599 0.90451 1.26877 1.00318 1.00087 0.83670 1.74746 1.18105 0.98188 1.25501 1.78708 1.13814 1.16086 1.02070 1.78922 1.18747 1.03481 1.08516 1.48809 1.38647 1.07983 1.13683 1.23205 1.08271 1.03867 0.73718 1.48092 1.45083 1.33583 1.06476 1.20635 0.93978 0.97995 0.84450 1.20553 0.98150 0.88763 0.96861 1.22425 0.89287 1.02269 0.94648 1.22152 1.04034 0.85477 0.92731 1.22365 0.92840 0.97816 0.99661 1.27864 0.94451 0.48273 0.97995 2.00000 1.28031 1.95604 1.98724 1.99918 1.23541 1.97686 1.94896 1.99924 1.37160 1.91814 1.86243 1.99918 1.22304 1.97362 1.96019 1.99922 1.38731 1.79737 1.98759 1.21929 1.01392 0.91247 0.98052 1.21556 0.77144 0.78475 0.92534 1.90751 1.60007 1.51110 1.41759 1.21759 1.02173 1.00144 0.93995 1.25104 1.04510 1.00771 1.13045 0.84476 0.78918 0.78436 0.74712 1.18535 1.22879 1.17130 0.88183 0.90276 0.87587 0.82201 0.86222 0.83072 0.86554 0.90172 0.83967 0.77265 0.75202 0.79890 0.82445 0.83910 0.85929 0.90756 0.90352 Number of geometries 1 Number of calculations of the screened coulomb radii 10 The total number of SCF iterations 740. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 4.14 7.71 71.98 0.55 4.70 16 2 C 0.22 -4.06 2.75 44.25 0.12 -3.94 16 3 C 0.17 -1.89 6.89 138.13 0.95 -0.94 16 4 N -0.32 0.79 10.24 -50.46 -0.52 0.28 16 5 N -0.11 -0.44 13.43 37.01 0.50 0.06 16 6 N -0.11 0.05 13.29 37.02 0.49 0.54 16 7 N -0.29 3.13 3.75 -359.64 -1.35 1.78 16 8 C 0.05 -1.07 11.05 127.77 1.41 0.34 16 9 N -0.60 6.78 2.36 -806.32 -1.91 4.87 16 10 C 0.15 -1.40 4.56 85.63 0.39 -1.01 16 11 C -0.04 0.44 5.13 -19.87 -0.10 0.34 16 12 C -0.07 1.34 7.88 22.27 0.18 1.51 16 13 C -0.03 0.53 10.05 22.27 0.22 0.76 16 14 C -0.11 0.92 8.62 22.27 0.19 1.11 16 15 C 0.32 0.74 4.82 22.27 0.11 0.85 16 16 F -0.22 -6.72 16.66 44.97 0.75 -5.97 16 17 F -0.16 -2.95 15.31 44.97 0.69 -2.26 16 18 F -0.15 -3.22 15.31 44.97 0.69 -2.53 16 19 F -0.16 -2.70 15.32 44.97 0.69 -2.01 16 20 F -0.17 -3.82 15.31 44.97 0.69 -3.14 16 21 C -0.11 0.07 7.74 22.27 0.17 0.24 16 22 C 0.51 -2.85 7.58 87.66 0.66 -2.18 16 23 O -0.56 -2.95 13.53 -3.04 -0.04 -2.99 16 24 C -0.14 1.78 3.57 29.85 0.11 1.88 16 25 C -0.34 1.97 3.75 71.98 0.27 2.24 16 26 Si 1.01 -6.70 29.30 68.60 2.01 -4.69 16 27 H -0.26 1.76 7.11 99.48 0.71 2.46 16 28 H -0.30 -0.35 7.11 99.48 0.71 0.36 16 29 H -0.25 2.06 7.11 99.48 0.71 2.76 16 30 H 0.10 -2.49 7.69 -2.39 -0.02 -2.51 16 31 H 0.08 -1.85 5.16 -2.39 -0.01 -1.86 16 32 H 0.11 -2.86 8.14 -2.39 -0.02 -2.88 16 33 H 0.16 -4.23 4.89 -2.39 -0.01 -4.24 16 34 H 0.12 -2.97 8.14 -2.39 -0.02 -2.99 16 35 H 0.15 -4.70 7.45 -2.39 -0.02 -4.71 16 36 H 0.12 -2.54 8.14 -2.39 -0.02 -2.56 16 37 H 0.08 -0.26 7.70 -2.39 -0.02 -0.28 16 38 H 0.14 -1.68 5.79 -2.38 -0.01 -1.69 16 39 H 0.21 -5.63 5.95 -2.91 -0.02 -5.65 16 40 H 0.23 -6.65 8.06 -2.91 -0.02 -6.67 16 41 H 0.18 -1.59 7.40 -2.91 -0.02 -1.61 16 42 H 0.16 1.10 5.75 -2.91 -0.02 1.09 16 43 H 0.14 -3.07 7.02 -2.38 -0.02 -3.08 16 44 H 0.12 -2.15 7.97 -2.39 -0.02 -2.17 16 45 H 0.07 -0.13 7.88 -2.38 -0.02 -0.15 16 46 H 0.08 -0.19 7.95 -2.39 -0.02 -0.21 16 Total: 0.00 -56.52 398.32 9.75 -46.77 By element: Atomic # 1 Polarization: -38.42 SS G_CDS: 1.82 Total: -36.60 kcal Atomic # 6 Polarization: 0.65 SS G_CDS: 5.24 Total: 5.89 kcal Atomic # 7 Polarization: 10.30 SS G_CDS: -2.78 Total: 7.52 kcal Atomic # 8 Polarization: -2.95 SS G_CDS: -0.04 Total: -2.99 kcal Atomic # 9 Polarization: -19.41 SS G_CDS: 3.50 Total: -15.90 kcal Atomic # 14 Polarization: -6.70 SS G_CDS: 2.01 Total: -4.69 kcal Total: -56.52 9.75 -46.77 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_275550_18179352_18164856_13179792.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 543.043 kcal (2) G-P(sol) polarization free energy of solvation -56.522 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 486.520 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 9.748 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -46.774 kcal (6) G-S(sol) free energy of system = (1) + (5) 496.269 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 56.15 seconds