Wall clock time and date at job start Wed Apr 14 2021 11:23:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 S 1.81399 * 1 3 3 C 1.81394 * 107.16573 * 2 1 4 4 O 1.42102 * 113.53931 * 126.19747 * 2 1 3 5 5 N 1.49350 * 107.52111 * 244.65918 * 2 1 3 6 6 C 1.32420 * 120.00181 * 295.10086 * 5 2 1 7 7 O 1.21545 * 119.99950 * 0.02562 * 6 5 2 8 8 C 1.50696 * 120.00446 * 180.02562 * 6 5 2 9 9 N 1.46499 * 109.47394 * 180.02562 * 8 6 5 10 10 C 1.46492 * 119.99824 * 90.00396 * 9 8 6 11 11 C 1.50694 * 109.47356 * 90.00040 * 10 9 8 12 12 C 1.38211 * 119.99942 * 270.26735 * 11 10 9 13 13 C 1.38255 * 120.00036 * 179.97438 * 12 11 10 14 14 C 1.38216 * 120.00390 * 359.97438 * 13 12 11 15 15 C 1.38259 * 119.99425 * 359.97438 * 14 13 12 16 Xx 1.80998 * 119.99675 * 179.97438 * 15 14 13 17 16 F 9.65685 * 140.75325 * 182.28418 * 6 1 2 18 17 F 1.60996 * 90.00155 * 314.99943 * 16 15 14 19 18 F 1.60996 * 89.99845 * 134.99943 * 16 15 14 20 19 F 1.61006 * 90.00200 * 45.00089 * 16 15 14 21 20 F 1.60998 * 90.00207 * 224.99960 * 16 15 14 22 21 C 1.38208 * 120.00091 * 359.81683 * 15 14 13 23 22 C 1.34774 * 119.99452 * 269.99734 * 9 8 6 24 23 O 1.21289 * 119.99574 * 180.02562 * 23 9 8 25 24 C 1.50694 * 120.00507 * 0.02562 * 23 9 8 26 25 C 1.53002 * 109.47171 * 179.97438 * 25 23 9 27 26 Si 1.86300 * 109.47186 * 179.97438 * 26 25 23 28 27 H 1.48503 * 109.47034 * 179.97438 * 27 26 25 29 28 H 1.48506 * 109.47068 * 299.99436 * 27 26 25 30 29 H 1.48502 * 109.47268 * 59.99557 * 27 26 25 31 30 H 1.09001 * 109.47190 * 53.80129 * 1 2 3 32 31 H 1.09004 * 109.47089 * 173.80262 * 1 2 3 33 32 H 1.09004 * 109.47568 * 293.80273 * 1 2 3 34 33 H 1.08997 * 109.47332 * 64.66317 * 3 2 1 35 34 H 1.09000 * 109.47215 * 184.66271 * 3 2 1 36 35 H 1.08998 * 109.47292 * 304.66045 * 3 2 1 37 36 H 1.09003 * 109.46984 * 300.00408 * 8 6 5 38 37 H 1.09007 * 109.46595 * 60.00042 * 8 6 5 39 38 H 1.09001 * 109.46802 * 209.99763 * 10 9 8 40 39 H 1.09000 * 109.47526 * 329.99644 * 10 9 8 41 40 H 1.07999 * 120.00301 * 359.97438 * 12 11 10 42 41 H 1.08004 * 119.99818 * 179.97438 * 13 12 11 43 42 H 1.07997 * 120.00201 * 179.97438 * 14 13 12 44 43 H 1.08004 * 119.99724 * 180.02562 * 22 15 14 45 44 H 1.09000 * 109.46804 * 299.98974 * 25 23 9 46 45 H 1.08991 * 109.47293 * 59.99369 * 25 23 9 47 46 H 1.09008 * 109.46983 * 299.99565 * 26 25 23 48 47 H 1.09000 * 109.47584 * 59.99405 * 26 25 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 16 1.8140 0.0000 0.0000 3 6 2.3494 1.7331 0.0000 4 8 2.3815 -0.7694 1.0513 5 7 2.2636 -0.6096 -1.2872 6 6 1.9991 -1.8810 -1.5457 7 8 1.3899 -2.5519 -0.7357 8 6 2.4532 -2.4963 -2.8442 9 7 2.0409 -3.9013 -2.8895 10 6 0.7397 -4.2649 -3.4558 11 6 0.8891 -4.5230 -4.9329 12 6 0.7383 -3.4863 -5.8344 13 6 0.8759 -3.7230 -7.1895 14 6 1.1648 -4.9963 -7.6429 15 6 1.3166 -6.0332 -6.7411 16 9 2.0268 -9.1850 -7.8628 17 9 0.5736 -7.5468 -8.4804 18 9 2.8149 -7.8549 -6.1891 19 9 2.8004 -7.0943 -8.3352 20 9 0.5882 -8.3075 -6.3344 21 6 1.1833 -5.7957 -5.3861 22 6 2.8587 -4.8593 -2.4102 23 8 2.5176 -6.0226 -2.4481 24 6 4.1971 -4.4853 -1.8273 25 6 4.9208 -5.7494 -1.3593 26 14 6.5757 -5.2871 -0.6394 27 1 7.2779 -6.5140 -0.1846 28 1 7.3924 -4.6037 -1.6745 29 1 6.3758 -4.3749 0.5153 30 1 -0.3633 0.6069 -0.8293 31 1 -0.3633 -1.0217 -0.1109 32 1 -0.3634 0.4148 0.9403 33 1 2.0364 2.2101 0.9288 34 1 3.4352 1.7780 -0.0835 35 1 1.8982 2.2528 -0.8453 36 1 2.0024 -1.9586 -3.6783 37 1 3.5391 -2.4334 -2.9158 38 1 0.3687 -5.1649 -2.9654 39 1 0.0343 -3.4488 -3.2991 40 1 0.5130 -2.4912 -5.4802 41 1 0.7577 -2.9129 -7.8940 42 1 1.2719 -5.1813 -8.7015 43 1 1.3024 -6.6056 -4.6816 44 1 4.7965 -3.9831 -2.5867 45 1 4.0499 -3.8163 -0.9795 46 1 4.3212 -6.2513 -0.5998 47 1 5.0680 -6.4188 -2.2069 RHF calculation, no. of doubly occupied orbitals= 75 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. SCF OSCILLATION -- NSTAR INDEX INCREASED BY ONE SCF OSCILLATION -- NSTAR INDEX INCREASED BY ONE SCF OSCILLATION -- NSTAR INDEX INCREASED BY ONE CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_275550_18179478_18164856_13179792.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Wed Apr 14 2021 11:23:49 Heat of formation + Delta-G solvation = 356.264662 kcal Electronic energy + Delta-G solvation = -40345.640253 eV Core-core repulsion = 34214.628427 eV Total energy + Delta-G solvation = -6131.011826 eV No. of doubly occupied orbitals = 75 Molecular weight (most abundant/longest-lived isotopes) = 420.110 amu Computer time = 44.16 seconds Orbital eigenvalues (eV) -43.68455 -43.54258 -43.45378 -43.36120 -43.13714 -41.97656 -41.03988 -40.20760 -37.67039 -36.86008 -34.57678 -34.33010 -33.14451 -32.66712 -31.48715 -30.61097 -29.67289 -27.97477 -24.91185 -24.27005 -23.10621 -22.84098 -20.17296 -19.49584 -18.65761 -18.45690 -18.36330 -17.72846 -17.44158 -17.26297 -17.02834 -16.92252 -16.22682 -15.86612 -15.77487 -15.58376 -15.35051 -15.11604 -15.03836 -14.84105 -14.80282 -14.69006 -14.59384 -14.46712 -14.41776 -14.21922 -14.05755 -13.84005 -13.74872 -13.58236 -13.56371 -13.45487 -13.42925 -13.39048 -13.29142 -13.15818 -13.10194 -12.96701 -12.89980 -12.88507 -12.48745 -12.41126 -11.89869 -11.70020 -11.62269 -11.57391 -11.45849 -11.20664 -11.15391 -11.09312 -11.04521 -10.95726 -10.69144 -10.58381 -10.01875 -4.61749 -4.11653 -3.17708 -2.05098 -0.91343 -0.76064 0.86336 1.28091 1.44226 1.54256 1.55548 1.67584 1.70896 1.74135 1.97791 2.21308 2.55818 2.58179 2.76474 3.04370 3.13905 3.21752 3.24609 3.25194 3.37237 3.46062 3.50598 3.65625 3.70747 3.79787 3.92939 4.02274 4.04040 4.06453 4.07756 4.21894 4.30509 4.34848 4.40111 4.42225 4.54037 4.60154 4.74722 4.97351 5.06802 5.25494 5.43034 6.05234 6.77265 7.08582 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.624 4.624 2 S 2.295 3.705 3 C -0.535 4.535 4 O -0.919 6.919 5 N -1.128 6.128 6 C 0.526 3.474 7 O -0.558 6.558 8 C 0.114 3.886 9 N -0.604 5.604 10 C 0.158 3.842 11 C -0.055 4.055 12 C -0.092 4.092 13 C -0.064 4.064 14 C -0.108 4.108 15 C 0.376 3.624 16 F -0.128 7.128 17 F -0.177 7.177 18 F -0.155 7.155 19 F -0.180 7.180 20 F -0.166 7.166 21 C -0.093 4.093 22 C 0.526 3.474 23 O -0.518 6.518 24 C -0.136 4.136 25 C -0.335 4.335 26 Si 0.961 3.039 27 H -0.258 1.258 28 H -0.260 1.260 29 H -0.260 1.260 30 H 0.133 0.867 31 H 0.144 0.856 32 H 0.128 0.872 33 H 0.141 0.859 34 H 0.151 0.849 35 H 0.147 0.853 36 H 0.117 0.883 37 H 0.120 0.880 38 H 0.111 0.889 39 H 0.108 0.892 40 H 0.165 0.835 41 H 0.179 0.821 42 H 0.184 0.816 43 H 0.189 0.811 44 H 0.098 0.902 45 H 0.098 0.902 46 H 0.092 0.908 47 H 0.091 0.909 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.822 22.640 2.842 23.135 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.779 4.779 2 S 2.492 3.508 3 C -0.693 4.693 4 O -0.905 6.905 5 N -1.038 6.038 6 C 0.310 3.690 7 O -0.437 6.437 8 C -0.015 4.015 9 N -0.338 5.338 10 C 0.035 3.965 11 C -0.057 4.057 12 C -0.110 4.110 13 C -0.082 4.082 14 C -0.125 4.125 15 C 0.371 3.629 16 F -0.128 7.128 17 F -0.176 7.176 18 F -0.154 7.154 19 F -0.179 7.179 20 F -0.164 7.164 21 C -0.111 4.111 22 C 0.315 3.685 23 O -0.392 6.392 24 C -0.175 4.175 25 C -0.427 4.427 26 Si 0.787 3.213 27 H -0.181 1.181 28 H -0.184 1.184 29 H -0.184 1.184 30 H 0.152 0.848 31 H 0.162 0.838 32 H 0.147 0.853 33 H 0.159 0.841 34 H 0.170 0.830 35 H 0.166 0.834 36 H 0.135 0.865 37 H 0.138 0.862 38 H 0.130 0.870 39 H 0.126 0.874 40 H 0.182 0.818 41 H 0.196 0.804 42 H 0.201 0.799 43 H 0.206 0.794 44 H 0.116 0.884 45 H 0.116 0.884 46 H 0.110 0.890 47 H 0.110 0.890 Dipole moment (debyes) X Y Z Total from point charges -2.827 21.642 3.909 22.173 hybrid contribution -0.774 -1.236 -0.624 1.586 sum -3.601 20.407 3.285 20.981 Atomic orbital electron populations 1.30054 1.23014 1.13314 1.11507 1.12691 0.80248 0.81561 0.76297 1.29002 1.14227 1.13308 1.12751 1.93605 1.73127 1.62953 1.60765 1.70573 1.59878 1.27280 1.46034 1.20322 0.77429 0.82100 0.89144 1.90944 1.41187 1.64237 1.47293 1.21275 1.03486 0.80965 0.95763 1.47765 1.18224 1.06353 1.61420 1.20420 0.85747 1.04791 0.85551 1.20568 0.99076 0.87739 0.98291 1.21748 0.96196 1.00426 0.92594 1.21436 0.98096 0.92024 0.96614 1.21983 0.99347 0.86863 1.04336 1.26706 1.05704 0.42284 0.88247 2.00000 1.14699 1.98307 1.99777 1.99919 1.27405 1.97454 1.92796 1.99923 1.36455 1.92062 1.86916 1.99921 1.39547 1.81921 1.96468 1.99921 1.26415 1.96648 1.93423 1.21972 0.97843 0.99178 0.92136 1.20879 0.86269 0.85068 0.76243 1.90733 1.75170 1.18409 1.54910 1.21497 0.93366 1.00378 1.02286 1.25038 1.10482 0.99886 1.07336 0.85143 0.75912 0.80492 0.79792 1.18132 1.18401 1.18382 0.84813 0.83772 0.85338 0.84073 0.83031 0.83428 0.86485 0.86249 0.87049 0.87434 0.81770 0.80364 0.79915 0.79398 0.88372 0.88374 0.88955 0.88990 Number of geometries 1 Number of calculations of the screened coulomb radii 10 The total number of SCF iterations 731. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.62 4.56 10.55 101.05 1.07 5.62 16 2 S 2.29 -12.26 4.53 -107.50 -0.49 -12.74 16 3 C -0.53 5.57 10.89 101.05 1.10 6.67 16 4 O -0.92 -1.30 17.28 -51.79 -0.89 -2.19 16 5 N -1.13 4.14 10.20 30.50 0.31 4.45 16 6 C 0.53 -0.72 7.33 -12.03 -0.09 -0.81 16 7 O -0.56 -1.27 14.44 -11.23 -0.16 -1.43 16 8 C 0.11 -0.49 5.76 -5.20 -0.03 -0.52 16 9 N -0.60 1.17 1.94 -176.44 -0.34 0.83 16 10 C 0.16 -0.57 5.53 -5.20 -0.03 -0.60 16 11 C -0.05 0.23 5.46 -104.63 -0.57 -0.34 16 12 C -0.09 0.69 9.70 -39.58 -0.38 0.31 16 13 C -0.06 0.47 10.05 -39.58 -0.40 0.07 16 14 C -0.11 0.33 8.62 -39.58 -0.34 -0.01 16 15 C 0.38 0.42 4.82 -39.58 -0.19 0.23 16 16 F -0.13 -1.63 16.66 2.25 0.04 -1.59 16 17 F -0.18 -1.46 15.31 2.25 0.03 -1.43 16 18 F -0.16 -1.46 15.31 2.25 0.03 -1.42 16 19 F -0.18 -1.50 15.32 2.25 0.03 -1.46 16 20 F -0.17 -1.51 15.31 2.25 0.03 -1.48 16 21 C -0.09 0.04 8.28 -39.58 -0.33 -0.28 16 22 C 0.53 0.70 7.67 -10.99 -0.08 0.62 16 23 O -0.52 -2.44 15.10 5.55 0.08 -2.36 16 24 C -0.14 0.02 3.63 -27.88 -0.10 -0.08 16 25 C -0.34 -0.28 3.74 37.16 0.14 -0.14 16 26 Si 0.96 0.61 29.30 -169.99 -4.98 -4.37 16 27 H -0.26 -0.57 7.11 56.52 0.40 -0.17 16 28 H -0.26 -0.22 7.11 56.52 0.40 0.18 16 29 H -0.26 -0.49 7.11 56.52 0.40 -0.09 16 30 H 0.13 -1.38 8.14 -51.92 -0.42 -1.80 16 31 H 0.14 -0.66 7.07 -51.92 -0.37 -1.03 16 32 H 0.13 -1.14 8.14 -51.92 -0.42 -1.56 16 33 H 0.14 -1.73 8.14 -51.93 -0.42 -2.15 16 34 H 0.15 -1.55 8.14 -51.92 -0.42 -1.97 16 35 H 0.15 -1.91 8.14 -51.92 -0.42 -2.33 16 36 H 0.12 -0.96 8.06 -51.93 -0.42 -1.38 16 37 H 0.12 -0.66 6.44 -51.92 -0.33 -0.99 16 38 H 0.11 -0.18 7.37 -51.93 -0.38 -0.56 16 39 H 0.11 -0.70 8.02 -51.93 -0.42 -1.11 16 40 H 0.16 -1.84 8.05 -52.49 -0.42 -2.26 16 41 H 0.18 -1.90 8.06 -52.48 -0.42 -2.33 16 42 H 0.18 -0.60 7.40 -52.49 -0.39 -0.99 16 43 H 0.19 0.34 6.93 -52.48 -0.36 -0.02 16 44 H 0.10 -0.30 7.22 -51.93 -0.38 -0.68 16 45 H 0.10 0.00 7.82 -51.93 -0.41 -0.41 16 46 H 0.09 0.16 7.92 -51.92 -0.41 -0.25 16 47 H 0.09 0.11 7.92 -51.93 -0.41 -0.30 16 LS Contribution 433.03 15.07 6.53 6.53 Total: 0.00 -24.11 433.03 -6.04 -30.15 By element: Atomic # 1 Polarization: -16.18 SS G_CDS: -6.03 Total: -22.20 kcal Atomic # 6 Polarization: 10.98 SS G_CDS: -0.24 Total: 10.74 kcal Atomic # 7 Polarization: 5.30 SS G_CDS: -0.03 Total: 5.27 kcal Atomic # 8 Polarization: -5.01 SS G_CDS: -0.97 Total: -5.98 kcal Atomic # 9 Polarization: -7.56 SS G_CDS: 0.18 Total: -7.39 kcal Atomic # 14 Polarization: 0.61 SS G_CDS: -4.98 Total: -4.37 kcal Atomic # 16 Polarization: -12.26 SS G_CDS: -0.49 Total: -12.74 kcal Total LS contribution 6.53 Total: 6.53 kcal Total: -24.11 -6.04 -30.15 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_275550_18179478_18164856_13179792.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 386.417 kcal (2) G-P(sol) polarization free energy of solvation -24.112 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 362.306 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.041 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.153 kcal (6) G-S(sol) free energy of system = (1) + (5) 356.265 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 44.16 seconds