Wall clock time and date at job start Wed Apr 14 2021 11:23:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 S 1.81399 * 1 3 3 C 1.81394 * 107.16573 * 2 1 4 4 O 1.42102 * 113.53931 * 126.19747 * 2 1 3 5 5 N 1.49350 * 107.52111 * 244.65918 * 2 1 3 6 6 C 1.32420 * 120.00181 * 295.10086 * 5 2 1 7 7 O 1.21545 * 119.99950 * 0.02562 * 6 5 2 8 8 C 1.50696 * 120.00446 * 180.02562 * 6 5 2 9 9 N 1.46499 * 109.47394 * 180.02562 * 8 6 5 10 10 C 1.46492 * 119.99824 * 90.00396 * 9 8 6 11 11 C 1.50694 * 109.47356 * 90.00040 * 10 9 8 12 12 C 1.38211 * 119.99942 * 270.26735 * 11 10 9 13 13 C 1.38255 * 120.00036 * 179.97438 * 12 11 10 14 14 C 1.38216 * 120.00390 * 359.97438 * 13 12 11 15 15 C 1.38259 * 119.99425 * 359.97438 * 14 13 12 16 Xx 1.80998 * 119.99675 * 179.97438 * 15 14 13 17 16 F 9.65685 * 140.75325 * 182.28418 * 6 1 2 18 17 F 1.60996 * 90.00155 * 314.99943 * 16 15 14 19 18 F 1.60996 * 89.99845 * 134.99943 * 16 15 14 20 19 F 1.61006 * 90.00200 * 45.00089 * 16 15 14 21 20 F 1.60998 * 90.00207 * 224.99960 * 16 15 14 22 21 C 1.38208 * 120.00091 * 359.81683 * 15 14 13 23 22 C 1.34774 * 119.99452 * 269.99734 * 9 8 6 24 23 O 1.21289 * 119.99574 * 180.02562 * 23 9 8 25 24 C 1.50694 * 120.00507 * 0.02562 * 23 9 8 26 25 C 1.53002 * 109.47171 * 179.97438 * 25 23 9 27 26 Si 1.86300 * 109.47186 * 179.97438 * 26 25 23 28 27 H 1.48503 * 109.47034 * 179.97438 * 27 26 25 29 28 H 1.48506 * 109.47068 * 299.99436 * 27 26 25 30 29 H 1.48502 * 109.47268 * 59.99557 * 27 26 25 31 30 H 1.09001 * 109.47190 * 53.80129 * 1 2 3 32 31 H 1.09004 * 109.47089 * 173.80262 * 1 2 3 33 32 H 1.09004 * 109.47568 * 293.80273 * 1 2 3 34 33 H 1.08997 * 109.47332 * 64.66317 * 3 2 1 35 34 H 1.09000 * 109.47215 * 184.66271 * 3 2 1 36 35 H 1.08998 * 109.47292 * 304.66045 * 3 2 1 37 36 H 1.09003 * 109.46984 * 300.00408 * 8 6 5 38 37 H 1.09007 * 109.46595 * 60.00042 * 8 6 5 39 38 H 1.09001 * 109.46802 * 209.99763 * 10 9 8 40 39 H 1.09000 * 109.47526 * 329.99644 * 10 9 8 41 40 H 1.07999 * 120.00301 * 359.97438 * 12 11 10 42 41 H 1.08004 * 119.99818 * 179.97438 * 13 12 11 43 42 H 1.07997 * 120.00201 * 179.97438 * 14 13 12 44 43 H 1.08004 * 119.99724 * 180.02562 * 22 15 14 45 44 H 1.09000 * 109.46804 * 299.98974 * 25 23 9 46 45 H 1.08991 * 109.47293 * 59.99369 * 25 23 9 47 46 H 1.09008 * 109.46983 * 299.99565 * 26 25 23 48 47 H 1.09000 * 109.47584 * 59.99405 * 26 25 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 16 1.8140 0.0000 0.0000 3 6 2.3494 1.7331 0.0000 4 8 2.3815 -0.7694 1.0513 5 7 2.2636 -0.6096 -1.2872 6 6 1.9991 -1.8810 -1.5457 7 8 1.3899 -2.5519 -0.7357 8 6 2.4532 -2.4963 -2.8442 9 7 2.0409 -3.9013 -2.8895 10 6 0.7397 -4.2649 -3.4558 11 6 0.8891 -4.5230 -4.9329 12 6 0.7383 -3.4863 -5.8344 13 6 0.8759 -3.7230 -7.1895 14 6 1.1648 -4.9963 -7.6429 15 6 1.3166 -6.0332 -6.7411 16 9 2.0268 -9.1850 -7.8628 17 9 0.5736 -7.5468 -8.4804 18 9 2.8149 -7.8549 -6.1891 19 9 2.8004 -7.0943 -8.3352 20 9 0.5882 -8.3075 -6.3344 21 6 1.1833 -5.7957 -5.3861 22 6 2.8587 -4.8593 -2.4102 23 8 2.5176 -6.0226 -2.4481 24 6 4.1971 -4.4853 -1.8273 25 6 4.9208 -5.7494 -1.3593 26 14 6.5757 -5.2871 -0.6394 27 1 7.2779 -6.5140 -0.1846 28 1 7.3924 -4.6037 -1.6745 29 1 6.3758 -4.3749 0.5153 30 1 -0.3633 0.6069 -0.8293 31 1 -0.3633 -1.0217 -0.1109 32 1 -0.3634 0.4148 0.9403 33 1 2.0364 2.2101 0.9288 34 1 3.4352 1.7780 -0.0835 35 1 1.8982 2.2528 -0.8453 36 1 2.0024 -1.9586 -3.6783 37 1 3.5391 -2.4334 -2.9158 38 1 0.3687 -5.1649 -2.9654 39 1 0.0343 -3.4488 -3.2991 40 1 0.5130 -2.4912 -5.4802 41 1 0.7577 -2.9129 -7.8940 42 1 1.2719 -5.1813 -8.7015 43 1 1.3024 -6.6056 -4.6816 44 1 4.7965 -3.9831 -2.5867 45 1 4.0499 -3.8163 -0.9795 46 1 4.3212 -6.2513 -0.5998 47 1 5.0680 -6.4188 -2.2069 RHF calculation, no. of doubly occupied orbitals= 75 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. SCF OSCILLATION -- NSTAR INDEX INCREASED BY ONE SCF OSCILLATION -- NSTAR INDEX INCREASED BY ONE CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_275550_18179478_18164856_13179792.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Wed Apr 14 2021 11:23:23 Heat of formation + Delta-G solvation = 344.968905 kcal Electronic energy + Delta-G solvation = -40346.130073 eV Core-core repulsion = 34214.628427 eV Total energy + Delta-G solvation = -6131.501647 eV No. of doubly occupied orbitals = 75 Molecular weight (most abundant/longest-lived isotopes) = 420.110 amu Computer time = 26.58 seconds Orbital eigenvalues (eV) -44.65093 -44.36831 -43.92233 -43.76111 -43.60457 -41.81269 -40.81329 -40.14590 -37.43236 -36.77444 -34.30567 -34.23928 -33.02779 -32.37983 -30.77833 -29.95278 -29.37717 -27.83506 -24.86602 -23.95168 -22.82115 -22.62996 -20.07445 -19.16155 -18.44071 -18.27359 -18.07024 -17.49311 -17.09064 -16.97528 -16.87748 -16.68799 -15.99883 -15.67904 -15.56698 -15.51175 -15.37973 -15.25588 -15.08821 -14.95033 -14.88142 -14.66675 -14.38104 -14.29528 -14.28103 -14.16858 -14.08657 -14.04078 -14.00940 -13.99695 -13.79356 -13.63248 -13.48454 -13.40597 -13.26127 -13.22317 -13.16107 -13.06320 -12.83688 -12.74228 -12.53901 -12.44566 -12.13844 -12.08110 -12.05644 -11.72630 -11.58790 -11.39471 -11.16076 -10.99993 -10.89184 -10.71477 -10.62916 -10.50769 -9.88855 -5.31567 -4.87850 -2.95919 -1.45399 -0.65741 -0.48148 1.25876 1.37304 1.49621 1.54861 1.59646 1.69062 1.85644 2.02911 2.13317 2.29174 2.69719 2.98644 3.12145 3.38124 3.51571 3.61854 3.68919 3.81187 3.89914 3.97686 4.02408 4.09675 4.10781 4.15398 4.20936 4.23924 4.25473 4.42858 4.50237 4.58242 4.68297 4.68938 4.78997 4.88229 4.91309 4.94382 4.96660 5.18400 5.24679 5.36369 5.56397 6.13389 6.98592 7.11051 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.610 4.610 2 S 2.262 3.738 3 C -0.497 4.497 4 O -1.004 7.004 5 N -1.121 6.121 6 C 0.513 3.487 7 O -0.609 6.609 8 C 0.106 3.894 9 N -0.597 5.597 10 C 0.154 3.846 11 C -0.049 4.049 12 C -0.058 4.058 13 C -0.028 4.028 14 C -0.113 4.113 15 C 0.341 3.659 16 F -0.081 7.081 17 F -0.251 7.251 18 F -0.213 7.213 19 F -0.116 7.116 20 F -0.222 7.222 21 C -0.116 4.116 22 C 0.515 3.485 23 O -0.570 6.570 24 C -0.138 4.138 25 C -0.342 4.342 26 Si 1.009 2.991 27 H -0.282 1.282 28 H -0.249 1.249 29 H -0.278 1.278 30 H 0.174 0.826 31 H 0.113 0.887 32 H 0.144 0.856 33 H 0.167 0.833 34 H 0.155 0.845 35 H 0.188 0.812 36 H 0.171 0.829 37 H 0.134 0.866 38 H 0.075 0.925 39 H 0.149 0.851 40 H 0.226 0.774 41 H 0.236 0.764 42 H 0.185 0.815 43 H 0.147 0.853 44 H 0.134 0.866 45 H 0.095 0.905 46 H 0.072 0.928 47 H 0.084 0.916 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.899 29.637 0.446 29.896 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.766 4.766 2 S 2.464 3.536 3 C -0.657 4.657 4 O -0.990 6.990 5 N -1.028 6.028 6 C 0.299 3.701 7 O -0.492 6.492 8 C -0.021 4.021 9 N -0.329 5.329 10 C 0.032 3.968 11 C -0.051 4.051 12 C -0.075 4.075 13 C -0.045 4.045 14 C -0.131 4.131 15 C 0.336 3.664 16 F -0.081 7.081 17 F -0.249 7.249 18 F -0.212 7.212 19 F -0.115 7.115 20 F -0.221 7.221 21 C -0.134 4.134 22 C 0.305 3.695 23 O -0.448 6.448 24 C -0.178 4.178 25 C -0.433 4.433 26 Si 0.836 3.164 27 H -0.208 1.208 28 H -0.172 1.172 29 H -0.203 1.203 30 H 0.192 0.808 31 H 0.132 0.868 32 H 0.163 0.837 33 H 0.185 0.815 34 H 0.174 0.826 35 H 0.206 0.794 36 H 0.188 0.812 37 H 0.151 0.849 38 H 0.093 0.907 39 H 0.166 0.834 40 H 0.243 0.757 41 H 0.252 0.748 42 H 0.202 0.798 43 H 0.164 0.836 44 H 0.152 0.848 45 H 0.113 0.887 46 H 0.090 0.910 47 H 0.103 0.897 Dipole moment (debyes) X Y Z Total from point charges -2.902 28.682 1.485 28.867 hybrid contribution -0.665 -3.005 0.085 3.079 sum -3.567 25.677 1.570 25.971 Atomic orbital electron populations 1.29877 1.20217 1.12408 1.14140 1.13572 0.81156 0.84459 0.74395 1.28943 1.14547 1.06313 1.15933 1.93539 1.75197 1.67741 1.62500 1.70560 1.60525 1.26228 1.45477 1.20900 0.76716 0.82848 0.89671 1.90939 1.43629 1.65357 1.49242 1.21727 1.04823 0.79287 0.96291 1.47772 1.17982 1.07058 1.60071 1.20556 0.85756 1.04815 0.85705 1.20665 0.99031 0.86820 0.98561 1.22412 0.92197 1.01297 0.91565 1.22249 0.94190 0.90344 0.97694 1.22480 0.99849 0.87005 1.03746 1.27593 1.10395 0.38678 0.89688 1.99962 1.68629 1.66358 1.73139 1.99929 1.29376 1.97875 1.97766 1.99936 1.97739 1.94998 1.28530 1.99948 1.64540 1.98476 1.48543 1.99915 1.70104 1.82913 1.69172 1.21859 1.00263 0.99752 0.91529 1.21220 0.87175 0.84997 0.76091 1.90718 1.76324 1.20673 1.57118 1.21580 0.93302 0.99789 1.03103 1.25124 1.11110 1.00446 1.06651 0.84469 0.74618 0.78596 0.78760 1.20772 1.17215 1.20276 0.80842 0.86837 0.83749 0.81525 0.82647 0.79430 0.81220 0.84881 0.90682 0.83375 0.75724 0.74788 0.79831 0.83564 0.84848 0.88690 0.90950 0.89706 Number of geometries 1 Number of calculations of the screened coulomb radii 6 The total number of SCF iterations 438. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.61 9.79 10.55 113.37 1.20 10.98 16 2 S 2.26 -25.75 4.53 -56.49 -0.26 -26.00 16 3 C -0.50 12.34 10.89 113.37 1.23 13.58 16 4 O -1.00 -5.24 17.28 -133.15 -2.30 -7.54 16 5 N -1.12 9.73 10.20 -176.98 -1.80 7.92 16 6 C 0.51 -1.56 7.33 88.02 0.65 -0.91 16 7 O -0.61 -4.06 14.44 11.98 0.17 -3.89 16 8 C 0.11 -1.12 5.76 85.63 0.49 -0.63 16 9 N -0.60 1.94 1.94 -830.53 -1.61 0.33 16 10 C 0.15 -1.00 5.53 85.63 0.47 -0.53 16 11 C -0.05 0.44 5.46 -19.87 -0.11 0.33 16 12 C -0.06 1.16 9.70 22.27 0.22 1.38 16 13 C -0.03 0.55 10.05 22.27 0.22 0.78 16 14 C -0.11 0.81 8.62 22.27 0.19 1.00 16 15 C 0.34 1.56 4.82 22.27 0.11 1.67 16 16 F -0.08 -2.25 16.66 44.97 0.75 -1.50 16 17 F -0.25 -5.06 15.31 44.97 0.69 -4.37 16 18 F -0.21 -5.08 15.31 44.97 0.69 -4.39 16 19 F -0.12 -1.98 15.32 44.97 0.69 -1.29 16 20 F -0.22 -5.51 15.31 44.97 0.69 -4.82 16 21 C -0.12 -0.28 8.28 22.27 0.18 -0.09 16 22 C 0.52 2.96 7.67 87.66 0.67 3.63 16 23 O -0.57 -8.58 15.10 -3.06 -0.05 -8.62 16 24 C -0.14 -0.26 3.63 29.85 0.11 -0.15 16 25 C -0.34 -1.74 3.74 71.98 0.27 -1.48 16 26 Si 1.01 3.08 29.30 68.60 2.01 5.09 16 27 H -0.28 -1.96 7.11 99.48 0.71 -1.25 16 28 H -0.25 -0.32 7.11 99.48 0.71 0.39 16 29 H -0.28 -1.61 7.11 99.48 0.71 -0.90 16 30 H 0.17 -4.28 8.14 -2.39 -0.02 -4.30 16 31 H 0.11 -0.95 7.07 -2.39 -0.02 -0.97 16 32 H 0.14 -2.78 8.14 -2.39 -0.02 -2.80 16 33 H 0.17 -4.82 8.14 -2.39 -0.02 -4.84 16 34 H 0.16 -3.74 8.14 -2.39 -0.02 -3.76 16 35 H 0.19 -6.05 8.14 -2.39 -0.02 -6.07 16 36 H 0.17 -3.74 8.06 -2.39 -0.02 -3.76 16 37 H 0.13 -1.76 6.44 -2.38 -0.02 -1.77 16 38 H 0.07 0.09 7.37 -2.39 -0.02 0.08 16 39 H 0.15 -2.23 8.02 -2.39 -0.02 -2.24 16 40 H 0.23 -7.06 8.05 -2.91 -0.02 -7.08 16 41 H 0.24 -6.94 8.06 -2.91 -0.02 -6.96 16 42 H 0.18 -1.39 7.40 -2.91 -0.02 -1.41 16 43 H 0.15 1.62 6.93 -2.91 -0.02 1.60 16 44 H 0.13 -0.82 7.22 -2.39 -0.02 -0.84 16 45 H 0.09 0.24 7.82 -2.39 -0.02 0.22 16 46 H 0.07 0.62 7.92 -2.38 -0.02 0.60 16 47 H 0.08 0.54 7.92 -2.39 -0.02 0.52 16 Total: 0.00 -72.43 433.03 7.35 -65.08 By element: Atomic # 1 Polarization: -47.32 SS G_CDS: 1.77 Total: -45.54 kcal Atomic # 6 Polarization: 23.65 SS G_CDS: 5.91 Total: 29.56 kcal Atomic # 7 Polarization: 11.67 SS G_CDS: -3.42 Total: 8.25 kcal Atomic # 8 Polarization: -17.88 SS G_CDS: -2.17 Total: -20.05 kcal Atomic # 9 Polarization: -19.88 SS G_CDS: 3.50 Total: -16.38 kcal Atomic # 14 Polarization: 3.08 SS G_CDS: 2.01 Total: 5.09 kcal Atomic # 16 Polarization: -25.75 SS G_CDS: -0.26 Total: -26.00 kcal Total: -72.43 7.35 -65.08 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_275550_18179478_18164856_13179792.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 410.053 kcal (2) G-P(sol) polarization free energy of solvation -72.429 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 337.624 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 7.345 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -65.084 kcal (6) G-S(sol) free energy of system = (1) + (5) 344.969 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 26.58 seconds