Wall clock time and date at job start Wed Apr 14 2021 12:38:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.21305 * 1 3 3 C 1.50700 * 119.99961 * 2 1 4 4 C 1.53006 * 109.47095 * 359.67112 * 3 2 1 5 5 Si 1.86295 * 109.47116 * 179.97438 * 4 3 2 6 6 H 1.48496 * 109.47020 * 180.02562 * 5 4 3 7 7 H 1.48501 * 109.46840 * 299.99693 * 5 4 3 8 8 H 1.48499 * 109.47450 * 59.99369 * 5 4 3 9 9 N 1.34775 * 119.99709 * 179.72886 * 2 1 3 10 10 C 1.46502 * 119.99331 * 184.87561 * 9 2 1 11 11 C 1.50707 * 109.47074 * 267.11423 * 10 9 2 12 12 C 1.38211 * 119.99776 * 276.39180 * 11 10 9 13 13 C 1.38264 * 119.99358 * 180.02562 * 12 11 10 14 Xx 1.80996 * 119.99726 * 179.97438 * 13 12 11 15 14 F 8.19423 * 117.86084 * 222.18810 * 2 1 3 16 15 F 1.60998 * 90.00183 * 134.99696 * 14 13 12 17 16 F 1.61002 * 89.99961 * 314.99405 * 14 13 12 18 17 F 1.61000 * 90.00012 * 224.99875 * 14 13 12 19 18 F 1.60997 * 90.00405 * 44.99611 * 14 13 12 20 19 C 1.38217 * 120.00201 * 359.94808 * 13 12 11 21 20 C 1.38256 * 119.99932 * 0.03074 * 20 13 12 22 21 C 1.38213 * 120.00100 * 359.76352 * 21 20 13 23 22 C 1.40759 * 120.00597 * 4.87390 * 9 2 1 24 23 C 1.35758 * 126.07658 * 0.28243 * 23 9 2 25 24 N 1.35817 * 107.56176 * 179.97438 * 24 23 9 26 25 C 1.46496 * 126.05119 * 180.02562 * 25 24 23 27 26 C 1.53002 * 109.47201 * 125.00438 * 26 25 24 28 27 O 1.42899 * 109.47021 * 179.97438 * 27 26 25 29 28 N 1.40064 * 107.89157 * 0.02562 * 25 24 23 30 29 C 1.30834 * 108.37290 * 359.71470 * 29 25 24 31 30 H 1.09003 * 109.46574 * 119.66149 * 3 2 1 32 31 H 1.08988 * 109.47331 * 239.66762 * 3 2 1 33 32 H 1.09000 * 109.46819 * 299.99942 * 4 3 2 34 33 H 1.09004 * 109.47169 * 59.99335 * 4 3 2 35 34 H 1.08992 * 109.47862 * 27.11488 * 10 9 2 36 35 H 1.09007 * 109.47065 * 147.12240 * 10 9 2 37 36 H 1.08000 * 120.00380 * 359.97438 * 12 11 10 38 37 H 1.07997 * 119.99490 * 180.02562 * 20 13 12 39 38 H 1.08000 * 119.99872 * 179.97438 * 21 20 13 40 39 H 1.07998 * 119.99937 * 180.02562 * 22 21 20 41 40 H 1.08003 * 126.21777 * 359.97438 * 24 23 9 42 41 H 1.09001 * 109.46737 * 245.00088 * 26 25 24 43 42 H 1.08996 * 109.47221 * 4.99622 * 26 25 24 44 43 H 1.09001 * 109.46990 * 299.99496 * 27 26 25 45 44 H 1.08998 * 109.47218 * 59.99685 * 27 26 25 46 45 H 0.96702 * 113.99893 * 180.02562 * 28 27 26 47 46 H 1.07999 * 125.83266 * 179.97438 * 30 29 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.2131 0.0000 0.0000 3 6 1.9665 1.3051 0.0000 4 6 0.9723 2.4680 -0.0083 5 14 1.9037 4.0814 -0.0075 6 1 0.9387 5.2101 -0.0149 7 1 2.7509 4.1632 1.2094 8 1 2.7640 4.1570 -1.2155 9 7 1.8869 -1.1672 0.0055 10 6 3.3479 -1.1689 0.1134 11 6 3.9535 -1.1874 -1.2666 12 6 4.1066 -2.3857 -1.9380 13 6 4.6627 -2.4025 -3.2038 14 9 5.0424 -5.3677 -4.8651 15 9 4.2839 -3.2952 -5.4237 16 9 5.4441 -4.6485 -2.7421 17 9 6.3551 -3.5410 -4.5106 18 9 3.3728 -4.4028 -3.6552 19 6 5.0644 -1.2210 -3.7980 20 6 4.9107 -0.0224 -3.1265 21 6 4.3509 -0.0050 -1.8629 22 6 1.1870 -2.3845 -0.0923 23 6 -0.1587 -2.5264 -0.2024 24 7 -0.4264 -3.8561 -0.2710 25 6 -1.7537 -4.4630 -0.3970 26 6 -1.7794 -5.3847 -1.6179 27 8 -3.0740 -5.9771 -1.7404 28 7 0.7914 -4.5444 -0.2000 29 6 1.7561 -3.6664 -0.0991 30 1 2.5886 1.3654 0.8931 31 1 2.5976 1.3603 -0.8869 32 1 0.3501 2.4077 -0.9012 33 1 0.3411 2.4128 0.8787 34 1 3.6744 -0.2731 0.6414 35 1 3.6706 -2.0529 0.6635 36 1 3.7928 -3.3089 -1.4737 37 1 5.4983 -1.2343 -4.7869 38 1 5.2249 0.9008 -3.5906 39 1 4.2305 0.9315 -1.3385 40 1 -0.8845 -1.7270 -0.2304 41 1 -1.9752 -5.0417 0.4998 42 1 -2.5016 -3.6793 -0.5175 43 1 -1.5579 -4.8061 -2.5147 44 1 -1.0315 -6.1684 -1.4973 45 1 -3.1629 -6.5755 -2.4948 46 1 2.8100 -3.8906 -0.0256 RHF calculation, no. of doubly occupied orbitals= 73 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. SCF OSCILLATION -- NSTAR INDEX INCREASED BY ONE CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_275550_18159712_18164856_13179792.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Wed Apr 14 2021 12:38:10 Heat of formation + Delta-G solvation = 422.399865 kcal Electronic energy + Delta-G solvation = -39347.346626 eV Core-core repulsion = 33410.618151 eV Total energy + Delta-G solvation = -5936.728475 eV No. of doubly occupied orbitals = 73 Molecular weight (most abundant/longest-lived isotopes) = 397.134 amu Computer time = 27.22 seconds Orbital eigenvalues (eV) -44.70926 -44.37993 -43.46004 -43.25497 -42.82709 -42.67514 -41.63220 -40.72237 -38.17541 -37.35792 -34.70637 -34.01301 -33.58850 -32.76755 -30.95330 -29.37974 -28.09583 -25.76297 -24.75587 -24.26848 -23.42198 -22.59513 -21.59784 -20.45293 -19.29152 -18.78922 -18.30177 -18.06084 -17.42391 -17.30769 -17.00917 -16.65716 -16.44264 -16.00813 -15.77483 -15.69827 -15.44031 -15.30973 -15.11666 -14.98255 -14.96727 -14.87172 -14.82388 -14.56056 -14.44569 -14.34586 -14.02592 -13.94611 -13.65142 -13.50658 -13.46872 -13.36511 -13.30548 -13.26345 -13.16003 -12.85837 -12.75525 -12.70378 -12.62513 -12.26680 -12.20343 -11.93738 -11.90366 -11.71671 -11.65653 -11.27551 -11.17282 -11.13157 -11.06544 -10.90634 -10.63850 -10.56181 -8.89513 -5.19062 -4.21086 -3.27773 -1.00764 -0.92319 0.70830 0.98797 1.07683 1.24669 1.39093 1.41240 1.42849 1.76446 1.79908 1.95931 2.44011 2.61870 2.82555 2.95470 2.99178 3.09286 3.19351 3.34131 3.53938 3.58155 3.63199 3.71068 3.71376 3.83018 3.88807 3.93037 3.95995 4.10230 4.13920 4.15316 4.28130 4.35476 4.36469 4.43735 4.53987 4.58558 4.61285 4.68426 4.84020 5.09765 5.51254 5.83592 5.94543 6.44150 6.52505 6.80821 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.514 6.514 2 C 0.515 3.485 3 C -0.136 4.136 4 C -0.337 4.337 5 Si 0.961 3.039 6 H -0.257 1.257 7 H -0.259 1.259 8 H -0.259 1.259 9 N -0.527 5.527 10 C 0.148 3.852 11 C -0.068 4.068 12 C -0.094 4.094 13 C 0.325 3.675 14 F -0.094 7.094 15 F -0.296 7.296 16 F -0.091 7.091 17 F -0.205 7.205 18 F -0.043 7.043 19 C -0.092 4.092 20 C -0.069 4.069 21 C -0.087 4.087 22 C -0.016 4.016 23 C 0.058 3.942 24 N -0.367 5.367 25 C 0.139 3.861 26 C 0.066 3.934 27 O -0.571 6.571 28 N -0.270 5.270 29 C 0.030 3.970 30 H 0.104 0.896 31 H 0.097 0.903 32 H 0.092 0.908 33 H 0.094 0.906 34 H 0.122 0.878 35 H 0.112 0.888 36 H 0.172 0.828 37 H 0.182 0.818 38 H 0.177 0.823 39 H 0.166 0.834 40 H 0.202 0.798 41 H 0.097 0.903 42 H 0.108 0.892 43 H 0.051 0.949 44 H 0.063 0.937 45 H 0.391 0.609 46 H 0.182 0.818 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.193 9.652 6.051 11.455 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.389 6.389 2 C 0.305 3.695 3 C -0.176 4.176 4 C -0.429 4.429 5 Si 0.786 3.214 6 H -0.180 1.180 7 H -0.182 1.182 8 H -0.183 1.183 9 N -0.253 5.253 10 C 0.025 3.975 11 C -0.070 4.070 12 C -0.113 4.113 13 C 0.316 3.684 14 F -0.094 7.094 15 F -0.292 7.292 16 F -0.088 7.088 17 F -0.203 7.203 18 F -0.042 7.042 19 C -0.110 4.110 20 C -0.087 4.087 21 C -0.105 4.105 22 C -0.119 4.119 23 C -0.088 4.088 24 N -0.153 5.153 25 C 0.018 3.982 26 C -0.013 4.013 27 O -0.377 6.377 28 N -0.091 5.091 29 C -0.159 4.159 30 H 0.122 0.878 31 H 0.115 0.885 32 H 0.111 0.889 33 H 0.113 0.887 34 H 0.140 0.860 35 H 0.130 0.870 36 H 0.189 0.811 37 H 0.199 0.801 38 H 0.194 0.806 39 H 0.183 0.817 40 H 0.218 0.782 41 H 0.115 0.885 42 H 0.126 0.874 43 H 0.070 0.930 44 H 0.081 0.919 45 H 0.240 0.760 46 H 0.199 0.801 Dipole moment (debyes) X Y Z Total from point charges 0.421 9.550 6.511 11.566 hybrid contribution 0.424 -1.122 -1.307 1.774 sum 0.846 8.428 5.204 9.941 Atomic orbital electron populations 1.90603 1.14019 1.86324 1.47915 1.20936 0.88234 0.84633 0.75744 1.21655 0.99680 0.91619 1.04616 1.25063 1.04316 1.05944 1.07558 0.85119 0.79283 0.76520 0.80486 1.18031 1.18244 1.18328 1.45068 1.05480 1.03717 1.71008 1.20734 0.78713 1.07360 0.90703 1.20414 0.99565 0.89049 0.97973 1.21695 0.98010 1.01562 0.89992 1.26962 1.04224 0.54722 0.82522 1.99974 1.98461 1.11303 1.99668 1.99938 1.84664 1.67646 1.76925 1.99940 1.26608 1.90788 1.91484 1.99915 1.34550 1.88273 1.97516 1.99933 1.09254 1.98180 1.96797 1.22094 0.98538 0.86343 1.04013 1.21540 0.97795 0.95460 0.93860 1.21868 0.94528 0.99013 0.95119 1.17662 0.91016 0.85758 1.17421 1.23097 0.96789 0.86650 1.02302 1.48427 1.05890 1.04187 1.56814 1.21436 0.78519 0.98351 0.99897 1.22271 0.85681 0.96487 0.96900 1.86349 1.31521 1.65549 1.54234 1.77351 0.88983 1.20614 1.22113 1.23612 0.99425 0.88975 1.03846 0.87797 0.88534 0.88879 0.88743 0.86006 0.86957 0.81072 0.80127 0.80587 0.81672 0.78190 0.88526 0.87416 0.93025 0.91872 0.75995 0.80142 Number of geometries 1 Number of calculations of the screened coulomb radii 3 The total number of SCF iterations 350. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.51 -0.44 13.16 5.54 0.07 -0.37 16 2 C 0.51 -1.44 7.63 -10.99 -0.08 -1.53 16 3 C -0.14 0.87 3.68 -27.88 -0.10 0.77 16 4 C -0.34 1.63 3.74 37.16 0.14 1.77 16 5 Si 0.96 -4.40 29.30 -169.99 -4.98 -9.39 16 6 H -0.26 0.51 7.11 56.52 0.40 0.92 16 7 H -0.26 0.99 7.11 56.52 0.40 1.39 16 8 H -0.26 1.14 7.11 56.52 0.40 1.54 16 9 N -0.53 1.97 2.70 -114.95 -0.31 1.66 16 10 C 0.15 -1.13 5.06 -5.19 -0.03 -1.16 16 11 C -0.07 0.46 5.46 -104.62 -0.57 -0.11 16 12 C -0.09 0.35 8.07 -39.58 -0.32 0.03 16 13 C 0.33 -0.24 4.82 -39.58 -0.19 -0.43 16 14 F -0.09 -0.94 16.66 2.25 0.04 -0.90 16 15 F -0.30 -2.49 15.31 2.25 0.03 -2.45 16 16 F -0.09 -0.41 15.31 2.25 0.03 -0.38 16 17 F -0.21 -1.47 15.31 2.25 0.03 -1.43 16 18 F -0.04 -0.23 15.31 2.25 0.03 -0.20 16 19 C -0.09 0.32 8.62 -39.58 -0.34 -0.03 16 20 C -0.07 0.52 10.05 -39.58 -0.40 0.12 16 21 C -0.09 0.74 8.77 -39.58 -0.35 0.39 16 22 C -0.02 0.01 6.64 -83.88 -0.56 -0.54 16 23 C 0.06 0.04 10.34 -16.68 -0.17 -0.13 16 24 N -0.37 -0.42 3.70 -61.03 -0.23 -0.65 16 25 C 0.14 -0.03 6.89 -4.04 -0.03 -0.06 16 26 C 0.07 0.01 7.23 37.16 0.27 0.27 16 27 O -0.57 -0.15 13.66 -35.23 -0.48 -0.63 16 28 N -0.27 -0.55 12.41 30.70 0.38 -0.17 16 29 C 0.03 -0.02 10.08 -17.22 -0.17 -0.19 16 30 H 0.10 -0.95 7.08 -51.93 -0.37 -1.32 16 31 H 0.10 -0.86 4.88 -51.94 -0.25 -1.11 16 32 H 0.09 -0.38 7.92 -51.93 -0.41 -0.79 16 33 H 0.09 -0.38 7.92 -51.93 -0.41 -0.79 16 34 H 0.12 -1.33 6.26 -51.93 -0.33 -1.66 16 35 H 0.11 -0.98 7.04 -51.93 -0.37 -1.35 16 36 H 0.17 -0.65 4.78 -52.49 -0.25 -0.90 16 37 H 0.18 -0.50 7.40 -52.49 -0.39 -0.89 16 38 H 0.18 -1.84 8.06 -52.49 -0.42 -2.26 16 39 H 0.17 -1.94 6.16 -52.49 -0.32 -2.27 16 40 H 0.20 0.16 5.87 -52.48 -0.31 -0.15 16 41 H 0.10 -0.03 8.14 -51.93 -0.42 -0.46 16 42 H 0.11 -0.17 8.07 -51.93 -0.42 -0.59 16 43 H 0.05 0.01 8.14 -51.93 -0.42 -0.41 16 44 H 0.06 0.05 8.14 -51.93 -0.42 -0.37 16 45 H 0.39 -1.41 9.12 45.56 0.42 -0.99 16 46 H 0.18 -0.69 5.82 -52.49 -0.31 -0.99 16 LS Contribution 402.04 15.07 6.06 6.06 Total: 0.00 -16.70 402.04 -6.41 -23.11 By element: Atomic # 1 Polarization: -9.25 SS G_CDS: -4.20 Total: -13.45 kcal Atomic # 6 Polarization: 2.09 SS G_CDS: -2.90 Total: -0.81 kcal Atomic # 7 Polarization: 1.00 SS G_CDS: -0.16 Total: 0.85 kcal Atomic # 8 Polarization: -0.59 SS G_CDS: -0.41 Total: -1.00 kcal Atomic # 9 Polarization: -5.55 SS G_CDS: 0.18 Total: -5.37 kcal Atomic # 14 Polarization: -4.40 SS G_CDS: -4.98 Total: -9.39 kcal Total LS contribution 6.06 Total: 6.06 kcal Total: -16.70 -6.41 -23.11 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_275550_18159712_18164856_13179792.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 445.511 kcal (2) G-P(sol) polarization free energy of solvation -16.697 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 428.815 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.415 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.112 kcal (6) G-S(sol) free energy of system = (1) + (5) 422.400 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 27.22 seconds