Wall clock time and date at job start Wed Apr 14 2021 12:05:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.21293 * 1 3 3 C 1.50699 * 120.00364 * 2 1 4 4 C 1.53007 * 109.46915 * 359.95989 * 3 2 1 5 5 Si 1.86300 * 109.47165 * 179.97438 * 4 3 2 6 6 H 1.48508 * 109.46876 * 60.00177 * 5 4 3 7 7 H 1.48496 * 109.46914 * 179.97438 * 5 4 3 8 8 H 1.48491 * 109.47222 * 300.00040 * 5 4 3 9 9 N 1.34779 * 120.00082 * 179.72680 * 2 1 3 10 10 C 1.46495 * 120.00393 * 184.79998 * 9 2 1 11 11 C 1.50697 * 109.47464 * 265.60157 * 10 9 2 12 12 C 1.38215 * 119.99526 * 275.94735 * 11 10 9 13 13 C 1.38258 * 119.99639 * 179.97438 * 12 11 10 14 Xx 1.81004 * 120.00029 * 179.97438 * 13 12 11 15 14 F 8.22080 * 117.88090 * 220.71678 * 2 1 3 16 15 F 1.60998 * 90.00207 * 134.99836 * 14 13 12 17 16 F 1.61006 * 89.99615 * 314.99896 * 14 13 12 18 17 F 1.60997 * 90.00047 * 225.00059 * 14 13 12 19 18 F 1.61005 * 90.00045 * 44.99638 * 14 13 12 20 19 C 1.38216 * 120.00174 * 359.95004 * 13 12 11 21 20 C 1.38255 * 120.00000 * 0.02673 * 20 13 12 22 21 C 1.38210 * 119.99829 * 359.76667 * 21 20 13 23 22 C 1.40164 * 119.99893 * 4.79765 * 9 2 1 24 23 N 1.31216 * 125.97433 * 185.31133 * 23 9 2 25 24 N 1.40066 * 108.16799 * 179.97438 * 24 23 9 26 25 C 1.46508 * 125.97628 * 179.97438 * 25 24 23 27 26 C 1.52998 * 109.46956 * 304.97960 * 26 25 24 28 27 O 1.42899 * 109.46885 * 180.02562 * 27 26 25 29 28 C 1.34967 * 108.05147 * 0.02562 * 25 24 23 30 29 C 1.35243 * 107.86088 * 359.74607 * 29 25 24 31 30 H 1.09002 * 109.47209 * 119.95348 * 3 2 1 32 31 H 1.08994 * 109.47581 * 239.96229 * 3 2 1 33 32 H 1.08993 * 109.46811 * 299.99918 * 4 3 2 34 33 H 1.08999 * 109.47167 * 59.99533 * 4 3 2 35 34 H 1.09007 * 109.47218 * 25.59859 * 10 9 2 36 35 H 1.08998 * 109.47721 * 145.59503 * 10 9 2 37 36 H 1.07990 * 120.00338 * 359.97438 * 12 11 10 38 37 H 1.08004 * 120.00102 * 180.02562 * 20 13 12 39 38 H 1.08003 * 119.99912 * 179.97438 * 21 20 13 40 39 H 1.08001 * 119.99873 * 179.97438 * 22 21 20 41 40 H 1.09000 * 109.46704 * 64.97203 * 26 25 24 42 41 H 1.08999 * 109.47182 * 184.97582 * 26 25 24 43 42 H 1.09000 * 109.46796 * 299.99187 * 27 26 25 44 43 H 1.08996 * 109.47890 * 59.99502 * 27 26 25 45 44 H 0.96705 * 113.99828 * 180.02562 * 28 27 26 46 45 H 1.08007 * 126.07048 * 180.02562 * 29 25 24 47 46 H 1.07999 * 126.06516 * 180.02562 * 30 29 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.2129 0.0000 0.0000 3 6 1.9665 1.3050 0.0000 4 6 0.9723 2.4680 -0.0010 5 14 1.9038 4.0814 -0.0002 6 1 2.7587 4.1600 -1.2120 7 1 0.9388 5.2101 -0.0018 8 1 2.7564 4.1602 1.2130 9 7 1.8868 -1.1672 0.0056 10 6 3.3479 -1.1690 0.1117 11 6 3.9518 -1.2260 -1.2678 12 6 4.1102 -2.4432 -1.9030 13 6 4.6638 -2.4955 -3.1688 14 9 5.0573 -5.5076 -4.7401 15 9 4.2855 -3.4570 -5.3599 16 9 5.4584 -4.7222 -2.6410 17 9 6.3598 -3.6639 -4.4442 18 9 3.3840 -4.5154 -3.5567 19 6 5.0578 -1.3304 -3.7995 20 6 4.8989 -0.1127 -3.1642 21 6 4.3416 -0.0601 -1.9005 22 6 1.1897 -2.3794 -0.0902 23 7 1.7133 -3.5790 0.0019 24 7 0.6841 -4.5174 -0.1470 25 6 0.8356 -5.9741 -0.1101 26 6 1.8802 -6.4045 -1.1418 27 8 2.0276 -7.8254 -1.1062 28 6 -0.4715 -3.8449 -0.3315 29 6 -0.1919 -2.5222 -0.2961 30 1 2.5926 1.3631 0.8904 31 1 2.5937 1.3625 -0.8896 32 1 0.3462 2.4100 -0.8913 33 1 0.3450 2.4106 0.8886 34 1 3.6768 -0.2597 0.6150 35 1 3.6696 -2.0382 0.6853 36 1 3.8016 -3.3535 -1.4106 37 1 5.4899 -1.3712 -4.7885 38 1 5.2072 0.7976 -3.6568 39 1 4.2179 0.8910 -1.4041 40 1 1.1595 -6.2806 0.8845 41 1 -0.1198 -6.4448 -0.3422 42 1 1.5563 -6.0980 -2.1364 43 1 2.8356 -5.9338 -0.9097 44 1 2.6760 -8.1695 -1.7357 45 1 -1.4471 -4.2849 -0.4768 46 1 -0.9039 -1.7185 -0.4118 RHF calculation, no. of doubly occupied orbitals= 73 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. SCF OSCILLATION -- NSTAR INDEX INCREASED BY ONE SCF OSCILLATION -- NSTAR INDEX INCREASED BY ONE SCF OSCILLATION -- NSTAR INDEX INCREASED BY ONE SCF OSCILLATION -- NSTAR INDEX INCREASED BY ONE CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_275550_17775592_18164856_13179792.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Wed Apr 14 2021 12:05:33 Heat of formation + Delta-G solvation = 413.577899 kcal Electronic energy + Delta-G solvation = -40062.426718 eV Core-core repulsion = 34125.315694 eV Total energy + Delta-G solvation = -5937.111024 eV No. of doubly occupied orbitals = 73 Molecular weight (most abundant/longest-lived isotopes) = 397.134 amu Computer time = 48.46 seconds Orbital eigenvalues (eV) -44.41710 -44.27611 -44.22243 -44.13073 -43.56791 -42.64147 -41.43433 -40.58697 -38.21086 -37.21208 -34.68590 -33.50064 -33.04696 -32.43259 -31.24176 -29.36758 -27.77208 -25.96342 -24.20392 -23.78887 -23.15218 -22.41564 -21.60314 -20.07687 -19.00842 -18.56627 -18.13199 -17.87319 -17.25909 -17.06971 -16.89447 -16.58131 -16.03964 -15.95756 -15.62667 -15.40479 -15.27523 -15.21316 -15.01771 -14.99329 -14.87244 -14.76332 -14.49159 -14.38869 -14.27501 -14.20353 -14.19469 -14.06022 -13.97240 -13.93390 -13.65271 -13.64920 -13.53561 -13.44935 -13.36005 -13.05480 -12.84130 -12.75455 -12.31910 -12.22235 -11.96675 -11.92290 -11.85707 -11.59385 -11.44525 -11.43826 -11.36850 -11.22724 -10.87499 -10.80409 -10.62930 -9.93750 -9.29511 -5.29544 -4.83657 -3.11717 -0.75407 -0.56408 0.67514 0.95033 1.33773 1.61965 1.73279 1.79476 1.85690 2.00828 2.06434 2.33935 2.64088 2.92014 3.05312 3.30230 3.42588 3.46499 3.56578 3.61811 3.77815 3.85806 3.92505 4.01214 4.05029 4.10556 4.16302 4.25590 4.34348 4.44685 4.49060 4.54405 4.59255 4.62524 4.68777 4.73261 4.76441 4.89053 5.00702 5.05805 5.11007 5.53383 5.78213 5.91440 5.97731 6.47290 6.66925 6.98868 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.540 6.540 2 C 0.518 3.482 3 C -0.135 4.135 4 C -0.342 4.342 5 Si 1.008 2.992 6 H -0.245 1.245 7 H -0.305 1.305 8 H -0.263 1.263 9 N -0.525 5.525 10 C 0.137 3.863 11 C -0.052 4.052 12 C -0.109 4.109 13 C 0.319 3.681 14 F -0.219 7.219 15 F -0.166 7.166 16 F -0.163 7.163 17 F -0.156 7.156 18 F -0.162 7.162 19 C -0.112 4.112 20 C -0.028 4.028 21 C -0.071 4.071 22 C 0.290 3.710 23 N -0.342 5.342 24 N -0.370 5.370 25 C 0.142 3.858 26 C 0.077 3.923 27 O -0.580 6.580 28 C 0.075 3.925 29 C -0.289 4.289 30 H 0.147 0.853 31 H 0.136 0.864 32 H 0.083 0.917 33 H 0.081 0.919 34 H 0.179 0.821 35 H 0.106 0.894 36 H 0.158 0.842 37 H 0.183 0.817 38 H 0.234 0.766 39 H 0.225 0.775 40 H 0.097 0.903 41 H 0.129 0.871 42 H 0.037 0.963 43 H 0.042 0.958 44 H 0.402 0.598 45 H 0.207 0.793 46 H 0.162 0.838 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.043 14.408 5.467 15.545 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.414 6.414 2 C 0.309 3.691 3 C -0.174 4.174 4 C -0.433 4.433 5 Si 0.836 3.164 6 H -0.168 1.168 7 H -0.231 1.231 8 H -0.187 1.187 9 N -0.254 5.254 10 C 0.016 3.984 11 C -0.054 4.054 12 C -0.128 4.128 13 C 0.315 3.685 14 F -0.219 7.219 15 F -0.164 7.164 16 F -0.162 7.162 17 F -0.155 7.155 18 F -0.161 7.161 19 C -0.129 4.129 20 C -0.045 4.045 21 C -0.088 4.088 22 C 0.036 3.964 23 N -0.172 5.172 24 N -0.155 5.155 25 C 0.020 3.980 26 C -0.002 4.002 27 O -0.388 6.388 28 C -0.070 4.070 29 C -0.319 4.319 30 H 0.164 0.836 31 H 0.154 0.846 32 H 0.102 0.898 33 H 0.099 0.901 34 H 0.196 0.804 35 H 0.125 0.875 36 H 0.175 0.825 37 H 0.200 0.800 38 H 0.250 0.750 39 H 0.241 0.759 40 H 0.115 0.885 41 H 0.147 0.853 42 H 0.055 0.945 43 H 0.060 0.940 44 H 0.253 0.747 45 H 0.224 0.776 46 H 0.179 0.821 Dipole moment (debyes) X Y Z Total from point charges 2.462 14.519 6.142 15.955 hybrid contribution -0.761 -2.415 -1.493 2.940 sum 1.701 12.103 4.649 13.076 Atomic orbital electron populations 1.90691 1.16046 1.86869 1.47774 1.21967 0.88171 0.85130 0.73825 1.21947 0.99580 0.87412 1.08460 1.25133 1.04658 1.06862 1.06673 0.84447 0.77574 0.73845 0.80584 1.16764 1.23145 1.18669 1.45304 1.07295 1.01864 1.70962 1.21247 0.76243 1.09922 0.90973 1.20653 0.99332 0.87496 0.97924 1.21875 0.98704 1.01908 0.90290 1.27848 1.09838 0.45179 0.85634 2.00000 1.87201 1.86817 1.47883 1.99919 1.98634 1.65145 1.52736 1.99920 1.97115 1.93552 1.25599 1.99919 1.71875 1.69251 1.74463 1.99918 1.67711 1.95678 1.52794 1.22423 1.00549 0.84933 1.05041 1.22245 0.95212 0.93073 0.93943 1.22541 0.92035 0.99960 0.94269 1.19476 0.91471 0.86817 0.98647 1.77111 1.12688 0.96248 1.31182 1.48067 1.04776 1.05618 1.56993 1.21521 1.02200 0.73413 1.00820 1.22123 0.98394 0.81919 0.97803 1.86277 1.66613 1.20148 1.65730 1.23161 0.92894 0.92181 0.98769 1.21849 0.95357 0.96856 1.17822 0.83562 0.84592 0.89779 0.90062 0.80399 0.87543 0.82517 0.79955 0.75001 0.75885 0.88495 0.85343 0.94452 0.93996 0.74713 0.77581 0.82112 Number of geometries 1 Number of calculations of the screened coulomb radii 15 The total number of SCF iterations 836. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -1.99 13.19 -3.07 -0.04 -2.03 16 2 C 0.52 -3.06 7.63 87.66 0.67 -2.39 16 3 C -0.14 2.29 3.68 29.85 0.11 2.40 16 4 C -0.34 4.11 3.74 71.98 0.27 4.38 16 5 Si 1.01 -12.43 29.30 68.60 2.01 -10.42 16 6 H -0.24 3.56 7.11 99.48 0.71 4.26 16 7 H -0.30 1.26 7.11 99.48 0.71 1.97 16 8 H -0.26 3.03 7.11 99.48 0.71 3.74 16 9 N -0.52 2.94 2.69 -640.25 -1.72 1.21 16 10 C 0.14 -1.95 5.25 85.63 0.45 -1.50 16 11 C -0.05 0.71 5.45 -19.87 -0.11 0.61 16 12 C -0.11 0.36 8.30 22.27 0.18 0.54 16 13 C 0.32 0.13 4.82 22.27 0.11 0.24 16 14 F -0.22 -5.81 16.66 44.97 0.75 -5.06 16 15 F -0.17 -2.74 15.31 44.97 0.69 -2.05 16 16 F -0.16 -2.78 15.31 44.97 0.69 -2.09 16 17 F -0.16 -2.44 15.31 44.97 0.69 -1.75 16 18 F -0.16 -2.88 15.31 44.97 0.69 -2.19 16 19 C -0.11 1.06 8.62 22.27 0.19 1.25 16 20 C -0.03 0.59 10.05 22.27 0.22 0.82 16 21 C -0.07 1.59 8.91 22.27 0.20 1.79 16 22 C 0.29 0.88 7.53 133.32 1.00 1.88 16 23 N -0.34 -1.64 10.92 -54.45 -0.59 -2.23 16 24 N -0.37 -1.44 3.68 -348.09 -1.28 -2.72 16 25 C 0.14 0.24 6.88 86.38 0.59 0.83 16 26 C 0.08 0.46 7.23 71.98 0.52 0.98 16 27 O -0.58 -3.50 13.66 -148.98 -2.03 -5.54 16 28 C 0.08 0.16 11.44 83.52 0.96 1.11 16 29 C -0.29 -1.46 9.59 22.11 0.21 -1.25 16 30 H 0.15 -3.59 7.07 -2.39 -0.02 -3.60 16 31 H 0.14 -3.41 5.05 -2.39 -0.01 -3.42 16 32 H 0.08 -0.80 7.92 -2.39 -0.02 -0.82 16 33 H 0.08 -0.71 7.92 -2.39 -0.02 -0.73 16 34 H 0.18 -4.58 6.20 -2.38 -0.01 -4.59 16 35 H 0.11 -1.20 7.74 -2.39 -0.02 -1.22 16 36 H 0.16 0.43 6.46 -2.92 -0.02 0.41 16 37 H 0.18 -1.72 7.40 -2.91 -0.02 -1.74 16 38 H 0.23 -7.04 8.06 -2.91 -0.02 -7.06 16 39 H 0.22 -7.37 6.16 -2.91 -0.02 -7.39 16 40 H 0.10 0.11 8.14 -2.39 -0.02 0.09 16 41 H 0.13 -0.36 8.07 -2.39 -0.02 -0.38 16 42 H 0.04 0.32 8.14 -2.39 -0.02 0.30 16 43 H 0.04 0.37 8.14 -2.39 -0.02 0.35 16 44 H 0.40 0.32 9.12 -74.05 -0.68 -0.35 16 45 H 0.21 -1.04 8.06 -2.91 -0.02 -1.06 16 46 H 0.16 1.14 6.00 -2.91 -0.02 1.12 16 Total: 0.00 -49.88 407.43 6.57 -43.32 By element: Atomic # 1 Polarization: -21.27 SS G_CDS: 1.15 Total: -20.13 kcal Atomic # 6 Polarization: 6.10 SS G_CDS: 5.58 Total: 11.68 kcal Atomic # 7 Polarization: -0.14 SS G_CDS: -3.60 Total: -3.74 kcal Atomic # 8 Polarization: -5.49 SS G_CDS: -2.08 Total: -7.57 kcal Atomic # 9 Polarization: -16.65 SS G_CDS: 3.50 Total: -13.14 kcal Atomic # 14 Polarization: -12.43 SS G_CDS: 2.01 Total: -10.42 kcal Total: -49.88 6.57 -43.32 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_275550_17775592_18164856_13179792.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 456.896 kcal (2) G-P(sol) polarization free energy of solvation -49.883 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 407.013 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 6.565 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -43.318 kcal (6) G-S(sol) free energy of system = (1) + (5) 413.578 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 48.46 seconds