Wall clock time and date at job start Thu Apr 15 2021 08:16:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.35692 * 116.99809 * 2 1 4 4 C 1.39229 * 120.13820 * 180.27715 * 3 2 1 5 5 C 1.38672 * 117.92229 * 180.02562 * 4 3 2 6 6 C 1.38717 * 118.02578 * 0.02562 * 5 4 3 7 7 C 1.50704 * 120.01259 * 180.02562 * 6 5 4 8 8 N 1.46497 * 109.47177 * 93.82895 * 7 6 5 9 9 C 1.46504 * 119.99565 * 84.21309 * 8 7 6 10 10 C 1.50704 * 109.46972 * 90.00421 * 9 8 7 11 11 C 1.38238 * 119.99651 * 270.26929 * 10 9 8 12 12 C 1.38229 * 120.00366 * 180.02562 * 11 10 9 13 13 C 1.38240 * 119.99834 * 359.97438 * 12 11 10 14 Xx 1.80993 * 120.00048 * 179.97438 * 13 12 11 15 14 F 8.76760 * 136.66614 * 173.42433 * 7 1 2 16 15 F 1.61003 * 90.00162 * 134.99935 * 14 13 12 17 16 F 1.60998 * 90.00302 * 315.00302 * 14 13 12 18 17 F 1.60997 * 90.00191 * 225.00095 * 14 13 12 19 18 F 1.61007 * 90.00273 * 45.00269 * 14 13 12 20 19 C 1.38234 * 119.99896 * 359.96058 * 13 12 11 21 20 C 1.38227 * 120.00461 * 89.99966 * 10 9 8 22 21 C 1.34772 * 120.00820 * 264.21218 * 8 7 6 23 22 O 1.21272 * 120.00887 * 184.75846 * 22 8 7 24 23 C 1.50711 * 119.99311 * 4.75483 * 22 8 7 25 24 C 1.53003 * 109.46857 * 179.47595 * 24 22 8 26 25 Si 1.86301 * 109.46889 * 180.02562 * 25 24 22 27 26 H 1.48504 * 109.46960 * 180.02562 * 26 25 24 28 27 H 1.48504 * 109.47061 * 300.00168 * 26 25 24 29 28 H 1.48494 * 109.47107 * 60.00595 * 26 25 24 30 29 N 1.31842 * 119.97514 * 359.97438 * 6 5 4 31 30 N 1.28348 * 122.25501 * 359.71780 * 30 6 5 32 31 H 1.09008 * 109.46931 * 180.02562 * 1 2 3 33 32 H 1.08996 * 109.47127 * 299.99718 * 1 2 3 34 33 H 1.08998 * 109.47639 * 59.99864 * 1 2 3 35 34 H 1.07997 * 121.03305 * 359.97438 * 4 3 2 36 35 H 1.08003 * 120.98808 * 179.97438 * 5 4 3 37 36 H 1.08999 * 109.47101 * 213.83302 * 7 6 5 38 37 H 1.08998 * 109.47203 * 333.83176 * 7 6 5 39 38 H 1.09001 * 109.47161 * 209.99484 * 9 8 7 40 39 H 1.08990 * 109.47420 * 329.99880 * 9 8 7 41 40 H 1.08003 * 119.99746 * 359.97438 * 11 10 9 42 41 H 1.08005 * 120.00485 * 179.97438 * 12 11 10 43 42 H 1.07997 * 120.00284 * 180.02562 * 20 13 12 44 43 H 1.08003 * 120.00357 * 0.20147 * 21 10 9 45 44 H 1.08995 * 109.47088 * 299.48127 * 24 22 8 46 45 H 1.09006 * 109.46790 * 59.48439 * 24 22 8 47 46 H 1.08995 * 109.47189 * 300.00720 * 25 24 22 48 47 H 1.09006 * 109.46732 * 60.00807 * 25 24 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0450 1.2090 0.0000 4 6 3.4352 1.2853 -0.0058 5 6 4.0164 2.5443 -0.0050 6 6 3.1779 3.6494 0.0021 7 6 3.7618 5.0387 0.0027 8 7 3.8590 5.5281 -1.3747 9 6 2.6973 6.1506 -2.0144 10 6 2.7151 7.6347 -1.7530 11 6 2.0883 8.1466 -0.6322 12 6 2.1041 9.5079 -0.3925 13 6 2.7471 10.3574 -1.2734 14 9 2.7874 13.7251 -0.6817 15 9 4.3362 12.1852 -1.3183 16 9 1.1983 12.0946 -0.6017 17 9 2.4065 12.4155 -2.5047 18 9 3.1280 11.8642 0.5847 19 6 3.3750 9.8454 -2.3935 20 6 3.3628 8.4835 -2.6309 21 6 5.0169 5.4059 -2.0534 22 8 5.1244 5.8874 -3.1612 23 6 6.1784 4.6707 -1.4354 24 6 7.3564 4.6657 -2.4117 25 14 8.7919 3.7563 -1.6481 26 1 9.9355 3.7520 -2.5955 27 1 9.1946 4.4345 -0.3898 28 1 8.3900 2.3581 -1.3502 29 7 1.8700 3.4837 0.0073 30 7 1.3267 2.3209 0.0007 31 1 -0.3633 -1.0277 0.0005 32 1 -0.3633 0.5138 0.8900 33 1 -0.3634 0.5138 -0.8899 34 1 4.0418 0.3918 -0.0100 35 1 5.0901 2.6611 -0.0089 36 1 3.1186 5.7029 0.5798 37 1 4.7552 5.0152 0.4507 38 1 2.7343 5.9706 -3.0888 39 1 1.7832 5.7205 -1.6053 40 1 1.5856 7.4830 0.0558 41 1 1.6141 9.9079 0.4829 42 1 3.8777 10.5089 -3.0815 43 1 3.8534 8.0836 -3.5060 44 1 6.4738 5.1688 -0.5120 45 1 5.8836 3.6444 -1.2164 46 1 7.0609 4.1677 -3.3351 47 1 7.6511 5.6921 -2.6307 RHF calculation, no. of doubly occupied orbitals= 75 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_275550_18175116_17777240_13179792.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Apr 15 2021 08:16:49 Heat of formation + Delta-G solvation = 400.497404 kcal Electronic energy + Delta-G solvation = -39567.698972 eV Core-core repulsion = 33501.794594 eV Total energy + Delta-G solvation = -6065.904378 eV No. of doubly occupied orbitals = 75 Molecular weight (most abundant/longest-lived isotopes) = 409.134 amu Computer time = 15.31 seconds Orbital eigenvalues (eV) -44.61932 -44.33888 -43.93517 -43.75480 -43.52835 -42.35863 -41.54172 -40.52049 -39.49651 -37.07396 -34.73951 -33.85562 -33.22918 -32.87409 -32.33970 -28.75927 -28.35481 -27.35884 -25.29548 -24.47377 -24.45788 -23.88380 -22.61498 -20.23059 -19.68340 -18.72741 -18.24984 -18.14016 -17.48276 -17.16281 -16.95628 -16.90382 -16.29590 -16.21316 -15.63922 -15.60383 -15.37252 -15.24547 -15.19983 -15.17755 -15.14813 -15.03476 -14.85184 -14.55565 -14.51900 -14.30474 -14.19826 -14.11633 -14.01644 -13.95411 -13.56113 -13.45790 -13.35424 -13.27336 -13.25480 -13.17740 -12.99970 -12.88202 -12.63246 -12.54060 -12.50249 -12.45887 -12.24068 -12.09108 -11.95508 -11.53675 -11.44802 -11.23132 -11.13020 -10.96214 -10.74775 -10.62438 -10.46669 -10.13689 -9.94937 -5.29694 -4.85215 -2.99998 -0.78722 -0.41689 -0.21783 -0.09181 1.53546 1.61995 1.68062 1.74538 1.75745 1.93247 2.12228 2.26759 2.61591 2.72119 3.00799 3.03780 3.26056 3.34532 3.36954 3.58599 3.62477 3.73805 3.85506 4.02662 4.07791 4.13418 4.22458 4.30061 4.34711 4.36268 4.37615 4.43884 4.45879 4.54325 4.59212 4.71776 4.73657 4.75004 4.81316 4.90697 4.98004 5.05230 5.06946 5.15560 5.34318 5.51284 5.97950 6.26765 7.15480 7.62231 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.032 3.968 2 O -0.314 6.314 3 C 0.247 3.753 4 C -0.138 4.138 5 C -0.069 4.069 6 C 0.014 3.986 7 C 0.159 3.841 8 N -0.604 5.604 9 C 0.153 3.847 10 C -0.076 4.076 11 C -0.024 4.024 12 C -0.111 4.111 13 C 0.350 3.650 14 F -0.079 7.079 15 F -0.120 7.120 16 F -0.213 7.213 17 F -0.263 7.263 18 F -0.203 7.203 19 C -0.118 4.118 20 C -0.029 4.029 21 C 0.518 3.482 22 O -0.558 6.558 23 C -0.147 4.147 24 C -0.330 4.330 25 Si 0.995 3.005 26 H -0.299 1.299 27 H -0.265 1.265 28 H -0.260 1.260 29 N -0.212 5.212 30 N -0.327 5.327 31 H 0.121 0.879 32 H 0.061 0.939 33 H 0.059 0.941 34 H 0.177 0.823 35 H 0.196 0.804 36 H 0.126 0.874 37 H 0.144 0.856 38 H 0.098 0.902 39 H 0.122 0.878 40 H 0.219 0.781 41 H 0.185 0.815 42 H 0.175 0.825 43 H 0.188 0.812 44 H 0.135 0.865 45 H 0.117 0.883 46 H 0.083 0.917 47 H 0.086 0.914 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.434 -16.131 3.051 16.596 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.062 4.062 2 O -0.218 6.218 3 C 0.062 3.938 4 C -0.167 4.167 5 C -0.097 4.097 6 C -0.135 4.135 7 C 0.035 3.965 8 N -0.336 5.336 9 C 0.030 3.970 10 C -0.078 4.078 11 C -0.041 4.041 12 C -0.129 4.129 13 C 0.346 3.654 14 F -0.079 7.079 15 F -0.119 7.119 16 F -0.211 7.211 17 F -0.261 7.261 18 F -0.202 7.202 19 C -0.136 4.136 20 C -0.047 4.047 21 C 0.308 3.692 22 O -0.435 6.435 23 C -0.186 4.186 24 C -0.423 4.423 25 Si 0.825 3.175 26 H -0.226 1.226 27 H -0.189 1.189 28 H -0.184 1.184 29 N -0.055 5.055 30 N -0.183 5.183 31 H 0.139 0.861 32 H 0.079 0.921 33 H 0.078 0.922 34 H 0.194 0.806 35 H 0.213 0.787 36 H 0.144 0.856 37 H 0.162 0.838 38 H 0.117 0.883 39 H 0.140 0.860 40 H 0.235 0.765 41 H 0.202 0.798 42 H 0.192 0.808 43 H 0.205 0.795 44 H 0.152 0.848 45 H 0.135 0.865 46 H 0.101 0.899 47 H 0.104 0.896 Dipole moment (debyes) X Y Z Total from point charges 1.755 -16.058 2.839 16.402 hybrid contribution 0.640 1.371 -0.310 1.544 sum 2.395 -14.688 2.530 15.095 Atomic orbital electron populations 1.23150 0.75437 1.05049 1.02576 1.86251 1.24558 1.23748 1.87267 1.21891 0.92164 0.87073 0.92710 1.21976 0.91662 1.01795 1.01268 1.22758 1.04010 0.90214 0.92709 1.23476 0.91318 0.99133 0.99617 1.20798 1.05202 0.87985 0.82517 1.48063 1.11347 1.59096 1.15107 1.20468 0.90471 0.84962 1.01066 1.21007 0.94737 0.98405 0.93619 1.21824 0.97213 0.87473 0.97629 1.22129 0.99269 0.89721 1.01757 1.27599 1.07842 0.30634 0.99354 1.99965 1.74581 1.36029 1.97329 1.99949 1.97325 1.96547 1.18068 1.99913 1.65666 1.56139 1.99417 1.99927 1.56673 1.94313 1.75192 1.99933 1.70525 1.95080 1.54635 1.21996 1.00644 0.95491 0.95446 1.21644 0.97002 0.84808 1.01224 1.21300 0.83881 0.78911 0.85099 1.90708 1.82552 1.48918 1.21315 1.21834 0.92361 1.02960 1.01412 1.24959 1.05113 1.08390 1.03862 0.84621 0.76021 0.78731 0.78149 1.22571 1.18926 1.18380 1.72590 1.12093 1.13513 1.07321 1.73013 1.32719 0.94824 1.17763 0.86062 0.92065 0.92184 0.80571 0.78662 0.85588 0.83829 0.88342 0.85957 0.76479 0.79772 0.80830 0.79547 0.84766 0.86533 0.89869 0.89568 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 181. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.15 10.40 113.37 1.18 1.03 16 2 O -0.31 0.30 10.49 -90.11 -0.95 -0.65 16 3 C 0.25 -0.54 7.57 84.85 0.64 0.10 16 4 C -0.14 1.22 10.16 22.61 0.23 1.45 16 5 C -0.07 0.98 9.19 22.49 0.21 1.18 16 6 C 0.01 -0.18 6.44 42.67 0.27 0.10 16 7 C 0.16 -3.00 5.61 85.63 0.48 -2.52 16 8 N -0.60 8.91 2.44 -830.51 -2.03 6.88 16 9 C 0.15 -2.16 5.51 85.63 0.47 -1.69 16 10 C -0.08 1.05 5.46 -19.87 -0.11 0.94 16 11 C -0.02 0.37 9.70 22.27 0.22 0.59 16 12 C -0.11 0.82 8.62 22.27 0.19 1.01 16 13 C 0.35 0.31 4.82 22.27 0.11 0.41 16 14 F -0.08 -1.87 16.66 44.97 0.75 -1.12 16 15 F -0.12 -1.82 15.31 44.97 0.69 -1.13 16 16 F -0.21 -3.73 15.32 44.97 0.69 -3.04 16 17 F -0.26 -4.97 15.31 44.97 0.69 -4.28 16 18 F -0.20 -3.08 15.31 44.97 0.69 -2.39 16 19 C -0.12 0.47 8.62 22.27 0.19 0.66 16 20 C -0.03 0.29 9.58 22.27 0.21 0.50 16 21 C 0.52 -5.48 7.66 87.66 0.67 -4.81 16 22 O -0.56 1.56 14.83 -3.01 -0.04 1.52 16 23 C -0.15 2.28 3.65 29.85 0.11 2.38 16 24 C -0.33 3.48 3.74 71.98 0.27 3.75 16 25 Si 1.00 -8.77 29.30 68.60 2.01 -6.76 16 26 H -0.30 0.52 7.11 99.48 0.71 1.23 16 27 H -0.27 2.05 7.11 99.48 0.71 2.76 16 28 H -0.26 2.31 7.11 99.48 0.71 3.02 16 29 N -0.21 1.12 11.42 -47.60 -0.54 0.57 16 30 N -0.33 0.16 10.41 -170.22 -1.77 -1.61 16 31 H 0.12 -1.07 8.14 -2.38 -0.02 -1.09 16 32 H 0.06 -0.25 8.11 -2.39 -0.02 -0.27 16 33 H 0.06 -0.23 8.11 -2.39 -0.02 -0.25 16 34 H 0.18 -2.28 8.06 -2.91 -0.02 -2.30 16 35 H 0.20 -4.40 6.03 -2.91 -0.02 -4.42 16 36 H 0.13 -2.79 8.11 -2.39 -0.02 -2.81 16 37 H 0.14 -3.61 6.18 -2.39 -0.01 -3.63 16 38 H 0.10 -1.11 7.44 -2.39 -0.02 -1.13 16 39 H 0.12 -1.94 8.02 -2.39 -0.02 -1.96 16 40 H 0.22 -5.07 8.06 -2.91 -0.02 -5.10 16 41 H 0.19 -1.36 7.40 -2.91 -0.02 -1.38 16 42 H 0.17 -0.47 7.40 -2.91 -0.02 -0.49 16 43 H 0.19 -1.98 7.40 -2.91 -0.02 -2.00 16 44 H 0.13 -2.91 7.11 -2.39 -0.02 -2.92 16 45 H 0.12 -2.34 5.06 -2.38 -0.01 -2.35 16 46 H 0.08 -0.70 7.93 -2.39 -0.02 -0.71 16 47 H 0.09 -0.74 7.92 -2.38 -0.02 -0.76 16 Total: 0.00 -40.78 421.31 7.32 -33.46 By element: Atomic # 1 Polarization: -28.35 SS G_CDS: 1.80 Total: -26.56 kcal Atomic # 6 Polarization: -0.24 SS G_CDS: 5.35 Total: 5.10 kcal Atomic # 7 Polarization: 10.19 SS G_CDS: -4.34 Total: 5.84 kcal Atomic # 8 Polarization: 1.86 SS G_CDS: -0.99 Total: 0.87 kcal Atomic # 9 Polarization: -15.46 SS G_CDS: 3.50 Total: -11.96 kcal Atomic # 14 Polarization: -8.77 SS G_CDS: 2.01 Total: -6.76 kcal Total: -40.78 7.32 -33.46 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_275550_18175116_17777240_13179792.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 433.958 kcal (2) G-P(sol) polarization free energy of solvation -40.783 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 393.175 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 7.322 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.461 kcal (6) G-S(sol) free energy of system = (1) + (5) 400.497 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 15.31 seconds