Wall clock time and date at job start Thu Apr 15 2021 09:06:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 N 1.31787 * 119.11822 * 2 1 4 4 C 1.32340 * 120.81631 * 179.97438 * 3 2 1 5 5 C 1.50708 * 120.44563 * 180.02562 * 4 3 2 6 6 C 1.38573 * 119.11192 * 0.02562 * 4 3 2 7 7 C 1.50690 * 120.80509 * 180.02562 * 6 4 3 8 8 N 1.46503 * 109.47140 * 184.61377 * 7 6 4 9 9 C 1.46502 * 120.00003 * 94.42318 * 8 7 6 10 10 C 1.50703 * 109.47126 * 90.00085 * 9 8 7 11 11 C 1.38220 * 119.99812 * 270.27547 * 10 9 8 12 12 C 1.38249 * 119.99733 * 180.02562 * 11 10 9 13 13 C 1.38211 * 120.00434 * 359.97407 * 12 11 10 14 14 C 1.38259 * 119.99928 * 359.97438 * 13 12 11 15 Xx 1.80995 * 120.00046 * 179.97438 * 14 13 12 16 15 F 9.66294 * 151.26736 * 17.45892 * 6 1 2 17 16 F 1.60997 * 90.00087 * 315.00103 * 15 14 13 18 17 F 1.61007 * 90.00049 * 135.00030 * 15 14 13 19 18 F 1.60997 * 90.00184 * 45.00072 * 15 14 13 20 19 F 1.61004 * 90.00151 * 224.99768 * 15 14 13 21 20 C 1.38216 * 119.99768 * 359.81494 * 14 13 12 22 21 C 1.34778 * 120.00041 * 274.42213 * 8 7 6 23 22 O 1.21278 * 119.99851 * 174.63340 * 22 8 7 24 23 C 1.50700 * 119.99856 * 354.63031 * 22 8 7 25 24 C 1.53005 * 109.47127 * 184.97367 * 24 22 8 26 25 Si 1.86296 * 109.47442 * 180.02562 * 25 24 22 27 26 H 1.48500 * 109.47099 * 59.99810 * 26 25 24 28 27 H 1.48498 * 109.47281 * 180.02562 * 26 25 24 29 28 H 1.48506 * 109.46909 * 300.00412 * 26 25 24 30 29 C 1.38625 * 118.39537 * 359.97438 * 6 4 3 31 30 N 1.31805 * 119.12509 * 179.73422 * 2 1 3 32 31 H 1.09005 * 109.47371 * 270.26365 * 1 2 3 33 32 H 1.09001 * 109.47705 * 30.26757 * 1 2 3 34 33 H 1.09001 * 109.46866 * 150.26712 * 1 2 3 35 34 H 1.08996 * 109.47141 * 85.15194 * 5 4 3 36 35 H 1.09000 * 109.46906 * 205.15273 * 5 4 3 37 36 H 1.08998 * 109.47184 * 325.15095 * 5 4 3 38 37 H 1.08996 * 109.47401 * 304.61649 * 7 6 4 39 38 H 1.09004 * 109.46864 * 64.61745 * 7 6 4 40 39 H 1.08998 * 109.47241 * 209.99639 * 9 8 7 41 40 H 1.08998 * 109.46888 * 330.00059 * 9 8 7 42 41 H 1.07994 * 119.99683 * 359.97431 * 11 10 9 43 42 H 1.08006 * 120.00043 * 179.97438 * 12 11 10 44 43 H 1.07998 * 120.00440 * 179.97438 * 13 12 11 45 44 H 1.07997 * 119.99767 * 180.02562 * 21 14 13 46 45 H 1.09000 * 109.47552 * 304.97393 * 24 22 8 47 46 H 1.08999 * 109.47150 * 64.98259 * 24 22 8 48 47 H 1.09000 * 109.46925 * 300.00409 * 25 24 22 49 48 H 1.09001 * 109.46625 * 59.99943 * 25 24 22 50 49 H 1.07994 * 120.45003 * 179.97438 * 30 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.1483 1.1513 0.0000 4 6 3.4711 1.1905 0.0005 5 6 4.1959 2.5119 0.0011 6 6 4.1809 0.0004 0.0005 7 6 5.6878 0.0005 0.0017 8 7 6.1763 -1.3762 -0.1097 9 6 6.5138 -1.9297 -1.4235 10 6 7.9650 -1.6576 -1.7255 11 6 8.3292 -0.4923 -2.3737 12 6 9.6604 -0.2430 -2.6512 13 6 10.6271 -1.1585 -2.2802 14 6 10.2628 -2.3235 -1.6309 15 9 12.6546 -4.4301 -1.3921 16 9 12.2226 -3.3752 -2.5908 17 9 10.8346 -3.6704 0.2997 18 9 12.4466 -2.3261 -0.5825 19 9 10.6105 -4.7197 -1.7086 20 6 8.9324 -2.5708 -1.3495 21 6 6.3153 -2.1335 0.9965 22 8 6.6259 -3.3015 0.8966 23 6 6.0849 -1.5288 2.3575 24 6 6.4257 -2.5579 3.4372 25 14 6.1401 -1.8106 5.1197 26 1 4.7157 -1.4113 5.2486 27 1 6.4716 -2.8092 6.1676 28 1 7.0061 -0.6154 5.2839 29 6 3.4712 -1.1904 0.0005 30 7 2.1485 -1.1514 0.0053 31 1 -0.3634 0.0047 1.0277 32 1 -0.3634 0.8875 -0.5180 33 1 -0.3633 -0.8924 -0.5097 34 1 4.2942 2.8719 1.0251 35 1 5.1864 2.3831 -0.4354 36 1 3.6315 3.2362 -0.5862 37 1 6.0517 0.5847 -0.8435 38 1 6.0503 0.4406 0.9306 39 1 6.3390 -3.0055 -1.4203 40 1 5.8902 -1.4624 -2.1856 41 1 7.5739 0.2228 -2.6640 42 1 9.9451 0.6673 -3.1581 43 1 11.6669 -0.9639 -2.4974 44 1 8.6479 -3.4807 -0.8420 45 1 6.7208 -0.6517 2.4778 46 1 5.0394 -1.2354 2.4524 47 1 5.7899 -3.4349 3.3168 48 1 7.4712 -2.8513 3.3422 49 1 3.9907 -2.1372 0.0001 RHF calculation, no. of doubly occupied orbitals= 75 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_275550_18161096_16731282_13179792.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Apr 15 2021 09:06:34 Heat of formation + Delta-G solvation = 304.798960 kcal Electronic energy + Delta-G solvation = -40473.505680 eV Core-core repulsion = 34566.596080 eV Total energy + Delta-G solvation = -5906.909601 eV No. of doubly occupied orbitals = 75 Molecular weight (most abundant/longest-lived isotopes) = 407.150 amu Computer time = 10.37 seconds Orbital eigenvalues (eV) -46.37016 -45.13482 -44.54511 -42.94159 -42.85111 -42.38446 -41.47371 -40.51382 -37.44806 -35.59885 -34.76724 -33.85478 -32.89565 -32.32162 -30.54912 -29.60002 -28.08194 -26.70581 -24.83228 -24.18687 -23.77096 -22.64691 -22.59076 -20.17420 -18.98624 -18.33993 -18.23571 -17.39915 -17.17007 -17.06769 -16.93154 -16.63561 -16.59789 -16.46762 -16.39874 -15.95060 -15.67922 -15.51521 -15.21471 -15.13834 -14.99704 -14.86913 -14.75899 -14.65604 -14.48734 -14.38807 -14.26258 -14.10018 -13.92125 -13.85076 -13.63286 -13.42691 -13.25064 -13.19450 -13.01833 -12.98523 -12.96367 -12.89708 -12.83582 -12.77146 -12.59925 -12.46304 -12.39380 -12.07981 -11.93081 -11.72059 -11.58585 -11.49696 -11.00658 -10.78791 -10.51389 -10.44950 -10.19867 -10.03507 -10.00075 -5.15552 -2.94190 -2.01302 -0.61613 -0.42773 -0.13891 0.12613 1.39296 1.50256 1.54785 1.59311 1.72305 2.04504 2.22112 2.69507 2.77764 2.99221 3.04167 3.18992 3.38252 3.53133 3.56221 3.61279 3.71172 3.72877 3.91769 3.97887 4.06630 4.15024 4.20175 4.28382 4.29470 4.47438 4.50724 4.56755 4.62699 4.67239 4.71774 4.73924 4.75812 4.81554 4.87713 4.90733 4.95802 5.00474 5.02448 5.21115 5.25556 5.28208 5.38616 5.56945 6.08216 6.15516 7.06150 7.15767 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.088 4.088 2 C 0.301 3.699 3 N -0.539 5.539 4 C 0.183 3.817 5 C -0.113 4.113 6 C -0.208 4.208 7 C 0.154 3.846 8 N -0.610 5.610 9 C 0.148 3.852 10 C -0.051 4.051 11 C -0.057 4.057 12 C -0.037 4.037 13 C -0.114 4.114 14 C 0.312 3.688 15 F 0.028 6.972 16 F -0.008 7.008 17 F -0.118 7.118 18 F -0.367 7.367 19 F -0.380 7.380 20 C -0.109 4.109 21 C 0.513 3.487 22 O -0.562 6.562 23 C -0.138 4.138 24 C -0.337 4.337 25 Si 1.002 2.998 26 H -0.272 1.272 27 H -0.291 1.291 28 H -0.256 1.256 29 C 0.146 3.854 30 N -0.551 5.551 31 H 0.090 0.910 32 H 0.092 0.908 33 H 0.085 0.915 34 H 0.097 0.903 35 H 0.123 0.877 36 H 0.078 0.922 37 H 0.154 0.846 38 H 0.129 0.871 39 H 0.085 0.915 40 H 0.151 0.849 41 H 0.223 0.777 42 H 0.228 0.772 43 H 0.177 0.823 44 H 0.152 0.848 45 H 0.132 0.868 46 H 0.106 0.894 47 H 0.079 0.921 48 H 0.080 0.920 49 H 0.159 0.841 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.447 16.557 -6.097 18.784 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.146 4.146 2 C 0.035 3.965 3 N -0.255 5.255 4 C 0.036 3.964 5 C -0.170 4.170 6 C -0.214 4.214 7 C 0.031 3.969 8 N -0.342 5.342 9 C 0.026 3.974 10 C -0.053 4.053 11 C -0.074 4.074 12 C -0.054 4.054 13 C -0.132 4.132 14 C 0.307 3.693 15 F 0.028 6.972 16 F -0.008 7.008 17 F -0.115 7.115 18 F -0.365 7.365 19 F -0.377 7.377 20 C -0.128 4.128 21 C 0.303 3.697 22 O -0.439 6.439 23 C -0.178 4.178 24 C -0.430 4.430 25 Si 0.830 3.170 26 H -0.197 1.197 27 H -0.217 1.217 28 H -0.180 1.180 29 C -0.019 4.019 30 N -0.266 5.266 31 H 0.108 0.892 32 H 0.111 0.889 33 H 0.104 0.896 34 H 0.116 0.884 35 H 0.141 0.859 36 H 0.097 0.903 37 H 0.171 0.829 38 H 0.146 0.854 39 H 0.104 0.896 40 H 0.168 0.832 41 H 0.240 0.760 42 H 0.244 0.756 43 H 0.195 0.805 44 H 0.169 0.831 45 H 0.150 0.850 46 H 0.124 0.876 47 H 0.098 0.902 48 H 0.099 0.901 49 H 0.177 0.823 Dipole moment (debyes) X Y Z Total from point charges -7.476 16.302 -5.289 18.698 hybrid contribution 1.974 -2.522 0.502 3.242 sum -5.501 13.779 -4.787 15.590 Atomic orbital electron populations 1.20630 0.85047 1.04566 1.04343 1.23572 0.99057 0.83425 0.90457 1.68224 1.11004 1.30320 1.15915 1.22183 0.88760 0.97095 0.88351 1.21067 1.00913 0.89955 1.05019 1.21974 1.00048 0.93977 1.05357 1.20915 0.85825 0.81798 1.08330 1.48063 1.65330 1.14966 1.05824 1.20676 0.88499 1.02446 0.85758 1.20667 0.94131 0.92311 0.98146 1.22377 0.98213 0.95123 0.91723 1.22165 0.89114 0.97262 0.96864 1.22338 1.06312 0.86950 0.97620 1.27787 0.65627 0.72328 1.03592 1.99604 1.92110 1.58660 1.46855 1.99481 1.92573 1.60436 1.48293 1.99921 1.85509 1.95780 1.30310 1.99935 1.72367 1.70128 1.94104 1.99933 1.95234 1.72604 1.69971 1.21939 0.86383 1.03341 1.01094 1.21256 0.75176 0.85934 0.87291 1.90775 1.47646 1.18189 1.87338 1.21613 1.05348 1.00672 0.90126 1.25033 1.05955 1.03564 1.08436 0.84533 0.79135 0.78513 0.74776 1.19697 1.21659 1.18014 1.23210 0.89014 0.99258 0.90406 1.68303 1.11342 1.31069 1.15908 0.89196 0.88935 0.89580 0.88445 0.85888 0.90275 0.82873 0.85357 0.89646 0.83161 0.76017 0.75584 0.80543 0.83103 0.85049 0.87602 0.90217 0.90092 0.82341 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 112. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 0.18 10.32 71.24 0.74 0.91 16 2 C 0.30 0.47 7.64 138.75 1.06 1.53 16 3 N -0.54 0.35 10.27 -176.03 -1.81 -1.46 16 4 C 0.18 -1.56 6.82 42.56 0.29 -1.27 16 5 C -0.11 1.87 9.93 71.24 0.71 2.58 16 6 C -0.21 2.33 5.80 -19.69 -0.11 2.21 16 7 C 0.15 -3.03 4.51 85.63 0.39 -2.64 16 8 N -0.61 7.83 1.45 -830.51 -1.21 6.62 16 9 C 0.15 -2.08 5.55 85.63 0.48 -1.61 16 10 C -0.05 0.68 5.46 -19.86 -0.11 0.57 16 11 C -0.06 1.31 9.70 22.27 0.22 1.52 16 12 C -0.04 0.77 10.05 22.27 0.22 1.00 16 13 C -0.11 0.97 8.62 22.27 0.19 1.17 16 14 C 0.31 0.66 4.82 22.27 0.11 0.77 16 15 F 0.03 0.58 14.79 44.97 0.67 1.24 16 16 F -0.01 -0.11 13.48 44.97 0.61 0.50 16 17 F -0.12 -2.42 16.47 44.97 0.74 -1.68 16 18 F -0.37 -6.83 15.65 44.97 0.70 -6.12 16 19 F -0.38 -8.33 15.11 44.97 0.68 -7.65 16 20 C -0.11 0.16 8.28 22.27 0.18 0.34 16 21 C 0.51 -2.11 6.39 87.66 0.56 -1.55 16 22 O -0.56 -3.49 15.34 -3.02 -0.05 -3.54 16 23 C -0.14 1.00 3.69 29.85 0.11 1.11 16 24 C -0.34 0.60 3.75 71.98 0.27 0.87 16 25 Si 1.00 -1.59 29.30 68.60 2.01 0.42 16 26 H -0.27 -0.02 7.11 99.48 0.71 0.69 16 27 H -0.29 -1.17 7.11 99.48 0.71 -0.46 16 28 H -0.26 0.53 7.11 99.48 0.71 1.24 16 29 C 0.15 -0.53 10.39 84.71 0.88 0.35 16 30 N -0.55 -1.45 10.33 -187.83 -1.94 -3.39 16 31 H 0.09 -0.28 8.14 -2.38 -0.02 -0.30 16 32 H 0.09 -0.34 8.14 -2.39 -0.02 -0.36 16 33 H 0.09 -0.20 8.14 -2.39 -0.02 -0.22 16 34 H 0.10 -1.66 8.14 -2.39 -0.02 -1.68 16 35 H 0.12 -3.09 6.49 -2.39 -0.02 -3.11 16 36 H 0.08 -1.09 8.14 -2.39 -0.02 -1.11 16 37 H 0.15 -4.46 7.24 -2.39 -0.02 -4.48 16 38 H 0.13 -2.97 6.47 -2.38 -0.02 -2.98 16 39 H 0.09 -0.63 7.30 -2.39 -0.02 -0.64 16 40 H 0.15 -3.31 8.02 -2.39 -0.02 -3.33 16 41 H 0.22 -7.50 8.06 -2.91 -0.02 -7.53 16 42 H 0.23 -6.73 8.06 -2.91 -0.02 -6.75 16 43 H 0.18 -1.45 7.40 -2.91 -0.02 -1.48 16 44 H 0.15 0.98 7.20 -2.91 -0.02 0.96 16 45 H 0.13 -1.84 7.15 -2.39 -0.02 -1.86 16 46 H 0.11 -0.98 7.86 -2.39 -0.02 -1.00 16 47 H 0.08 0.08 7.87 -2.39 -0.02 0.06 16 48 H 0.08 0.05 7.96 -2.39 -0.02 0.03 16 49 H 0.16 -0.57 6.30 -2.91 -0.02 -0.59 16 Total: 0.00 -50.42 429.34 8.34 -42.09 By element: Atomic # 1 Polarization: -36.67 SS G_CDS: 1.76 Total: -34.91 kcal Atomic # 6 Polarization: 1.70 SS G_CDS: 6.18 Total: 7.87 kcal Atomic # 7 Polarization: 6.73 SS G_CDS: -4.96 Total: 1.77 kcal Atomic # 8 Polarization: -3.49 SS G_CDS: -0.05 Total: -3.54 kcal Atomic # 9 Polarization: -17.10 SS G_CDS: 3.40 Total: -13.71 kcal Atomic # 14 Polarization: -1.59 SS G_CDS: 2.01 Total: 0.42 kcal Total: -50.42 8.34 -42.09 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_275550_18161096_16731282_13179792.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 346.885 kcal (2) G-P(sol) polarization free energy of solvation -50.421 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 296.464 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 8.335 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.086 kcal (6) G-S(sol) free energy of system = (1) + (5) 304.799 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 10.37 seconds