Wall clock time and date at job start Thu Apr 15 2021 11:27:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 N 1.46495 * 109.47330 * 2 1 4 4 C 1.34944 * 126.03785 * 125.28190 * 3 2 1 5 5 C 1.35322 * 107.74663 * 180.02562 * 4 3 2 6 6 C 1.50699 * 126.04046 * 180.02562 * 5 4 3 7 7 N 1.46500 * 109.46945 * 101.57894 * 6 5 4 8 8 C 1.46498 * 120.00402 * 93.21496 * 7 6 5 9 9 C 1.50696 * 109.46914 * 89.99440 * 8 7 6 10 10 C 1.38211 * 120.00542 * 270.27407 * 9 8 7 11 11 C 1.38257 * 120.00167 * 180.02562 * 10 9 8 12 12 C 1.38217 * 119.99965 * 359.97438 * 11 10 9 13 13 C 1.38251 * 119.99909 * 359.97438 * 12 11 10 14 Xx 1.81001 * 120.00153 * 179.97438 * 13 12 11 15 14 F 9.66171 * 166.51608 * 8.85203 * 5 1 2 16 15 F 1.61001 * 89.99807 * 315.00062 * 14 13 12 17 16 F 1.60998 * 90.00146 * 134.99733 * 14 13 12 18 17 F 1.61001 * 90.00065 * 44.99766 * 14 13 12 19 18 F 1.60993 * 90.00336 * 225.00120 * 14 13 12 20 19 C 1.38215 * 120.00046 * 359.81365 * 13 12 11 21 20 C 1.34780 * 119.99678 * 273.21682 * 7 6 5 22 21 O 1.21284 * 119.99476 * 184.99377 * 21 7 6 23 22 C 1.50697 * 120.00278 * 4.99011 * 21 7 6 24 23 C 1.52994 * 109.47092 * 175.94201 * 23 21 7 25 24 Si 1.86304 * 109.47330 * 179.97438 * 24 23 21 26 25 H 1.48493 * 109.47348 * 179.97438 * 25 24 23 27 26 H 1.48498 * 109.47091 * 299.99891 * 25 24 23 28 27 H 1.48502 * 109.47014 * 59.99354 * 25 24 23 29 28 C 1.39866 * 107.91992 * 0.02562 * 5 4 3 30 29 C 1.50697 * 125.89888 * 179.97438 * 29 5 4 31 30 N 1.30845 * 108.20386 * 359.71582 * 29 5 4 32 31 H 1.09002 * 109.46832 * 180.02562 * 1 2 3 33 32 H 1.09003 * 109.46804 * 299.99323 * 1 2 3 34 33 H 1.08999 * 109.47562 * 60.00197 * 1 2 3 35 34 H 1.08997 * 109.47087 * 120.00623 * 2 1 3 36 35 H 1.09001 * 109.46697 * 240.00134 * 2 1 3 37 36 H 1.07999 * 126.12657 * 359.97438 * 4 3 2 38 37 H 1.09000 * 109.47506 * 221.57630 * 6 5 4 39 38 H 1.08999 * 109.47066 * 341.58049 * 6 5 4 40 39 H 1.08993 * 109.47293 * 209.99921 * 8 7 6 41 40 H 1.09006 * 109.46755 * 330.00207 * 8 7 6 42 41 H 1.07994 * 119.99883 * 359.97438 * 10 9 8 43 42 H 1.08003 * 119.99998 * 179.97438 * 11 10 9 44 43 H 1.07994 * 119.99855 * 179.97438 * 12 11 10 45 44 H 1.08003 * 119.99919 * 180.02562 * 20 13 12 46 45 H 1.09003 * 109.47265 * 295.93933 * 23 21 7 47 46 H 1.09000 * 109.47170 * 55.93863 * 23 21 7 48 47 H 1.09000 * 109.47044 * 299.99489 * 24 23 21 49 48 H 1.08995 * 109.47629 * 60.00215 * 24 23 21 50 49 H 1.09004 * 109.47348 * 94.75581 * 30 29 5 51 50 H 1.09003 * 109.47014 * 214.75215 * 30 29 5 52 51 H 1.08997 * 109.47468 * 334.75329 * 30 29 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 7 2.0184 1.3812 0.0000 4 6 2.8773 1.9195 0.8908 5 6 3.0739 3.2128 0.5444 6 6 3.9608 4.1978 1.2615 7 7 5.2202 4.3450 0.5278 8 6 5.3688 5.4110 -0.4660 9 6 5.9057 6.6500 0.2029 10 6 5.0339 7.5795 0.7379 11 6 5.5265 8.7165 1.3512 12 6 6.8909 8.9234 1.4296 13 6 7.7629 7.9932 0.8953 14 9 11.1401 8.5032 1.0892 15 9 9.3429 9.7957 0.5451 16 9 9.7562 6.7331 1.4498 17 9 9.3955 8.6993 2.5399 18 9 9.7038 7.8296 -0.5450 19 6 7.2705 6.8544 0.2862 20 6 6.2423 3.4996 0.7671 21 8 7.3140 3.6758 0.2274 22 6 6.0534 2.3355 1.7054 23 6 7.3236 1.4829 1.7224 24 14 7.0905 0.0443 2.8829 25 1 8.3232 -0.7836 2.8989 26 1 6.8166 0.5515 4.2514 27 1 5.9456 -0.7822 2.4230 28 6 2.3085 3.4738 -0.5968 29 6 2.2269 4.7914 -1.3237 30 7 1.6798 2.3750 -0.9274 31 1 -0.3633 -1.0277 0.0005 32 1 -0.3633 0.5137 0.8901 33 1 -0.3634 0.5138 -0.8900 34 1 1.8933 -0.5139 0.8899 35 1 1.8933 -0.5138 -0.8900 36 1 3.3265 1.4098 1.7302 37 1 3.4589 5.1637 1.3192 38 1 4.1671 3.8348 2.2684 39 1 6.0612 5.0888 -1.2437 40 1 4.3984 5.6302 -0.9115 41 1 3.9679 7.4181 0.6763 42 1 4.8453 9.4431 1.7689 43 1 7.2757 9.8118 1.9082 44 1 7.9518 6.1275 -0.1308 45 1 5.8521 2.7075 2.7100 46 1 5.2132 1.7290 1.3674 47 1 7.5249 1.1109 0.7178 48 1 8.1639 2.0894 2.0604 49 1 2.9411 4.7969 -2.1472 50 1 1.2191 4.9282 -1.7159 51 1 2.4615 5.6021 -0.6340 RHF calculation, no. of doubly occupied orbitals= 76 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. SCF OSCILLATION -- NSTAR INDEX INCREASED BY ONE CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_275550_18161096_17777120_13179792.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Apr 15 2021 11:27:03 Heat of formation + Delta-G solvation = 445.462263 kcal Electronic energy + Delta-G solvation = -41126.571040 eV Core-core repulsion = 35198.449580 eV Total energy + Delta-G solvation = -5928.121461 eV No. of doubly occupied orbitals = 76 Molecular weight (most abundant/longest-lived isotopes) = 409.166 amu Computer time = 20.25 seconds Orbital eigenvalues (eV) -44.64652 -44.33348 -43.96764 -43.77479 -43.52090 -42.31027 -41.42154 -40.39571 -37.13681 -35.49821 -34.32890 -32.98841 -32.40277 -32.21734 -31.27155 -28.88944 -27.84167 -26.73211 -24.64967 -23.89990 -23.62180 -22.57978 -21.79176 -20.64715 -19.70472 -18.28374 -18.19813 -17.49132 -17.32934 -16.92710 -16.71569 -16.28798 -15.94168 -15.62329 -15.43603 -15.33252 -15.25328 -15.07726 -15.01707 -14.96382 -14.84179 -14.63119 -14.49129 -14.33327 -14.20992 -14.13551 -14.06711 -14.02399 -13.97242 -13.76530 -13.56437 -13.43340 -13.34826 -13.22496 -13.19582 -13.14106 -13.04152 -12.85357 -12.78906 -12.67176 -12.55541 -12.45718 -12.32022 -12.16074 -12.09852 -11.98609 -11.62789 -11.49858 -11.28001 -11.14191 -10.92067 -10.69263 -10.42443 -10.10572 -9.84693 -9.26174 -5.31655 -4.86888 -2.93133 -0.62970 -0.44261 1.02558 1.45787 1.59571 1.63202 1.65598 1.69600 1.72092 1.97412 2.10807 2.48993 2.73461 3.02914 3.44332 3.55295 3.60086 3.71141 3.78714 3.92433 3.94871 4.06463 4.08829 4.13104 4.20367 4.26851 4.30891 4.36784 4.41555 4.47060 4.54096 4.63023 4.65743 4.74209 4.79531 4.81438 4.84939 4.87248 4.95106 4.96784 5.02179 5.08072 5.14127 5.18656 5.22459 5.32893 5.38624 5.56799 5.88631 6.20422 6.38047 6.90558 7.24011 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.159 4.159 2 C 0.122 3.878 3 N -0.379 5.379 4 C 0.064 3.936 5 C -0.266 4.266 6 C 0.181 3.819 7 N -0.600 5.600 8 C 0.147 3.853 9 C -0.045 4.045 10 C -0.060 4.060 11 C -0.033 4.033 12 C -0.117 4.117 13 C 0.338 3.662 14 F -0.085 7.085 15 F -0.211 7.211 16 F -0.118 7.118 17 F -0.203 7.203 18 F -0.267 7.267 19 C -0.113 4.113 20 C 0.511 3.489 21 O -0.578 6.578 22 C -0.136 4.136 23 C -0.341 4.341 24 Si 1.004 2.996 25 H -0.297 1.297 26 H -0.259 1.259 27 H -0.254 1.254 28 C 0.078 3.922 29 C -0.085 4.085 30 N -0.343 5.343 31 H 0.089 0.911 32 H 0.057 0.943 33 H 0.047 0.953 34 H 0.125 0.875 35 H 0.080 0.920 36 H 0.202 0.798 37 H 0.129 0.871 38 H 0.111 0.889 39 H 0.078 0.922 40 H 0.148 0.852 41 H 0.225 0.775 42 H 0.229 0.771 43 H 0.179 0.821 44 H 0.151 0.849 45 H 0.129 0.871 46 H 0.113 0.887 47 H 0.074 0.926 48 H 0.075 0.925 49 H 0.079 0.921 50 H 0.067 0.933 51 H 0.116 0.884 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -19.652 -2.658 4.675 20.375 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.217 4.217 2 C 0.002 3.998 3 N -0.160 5.160 4 C -0.084 4.084 5 C -0.279 4.279 6 C 0.059 3.941 7 N -0.331 5.331 8 C 0.025 3.975 9 C -0.046 4.046 10 C -0.077 4.077 11 C -0.050 4.050 12 C -0.135 4.135 13 C 0.334 3.666 14 F -0.085 7.085 15 F -0.210 7.210 16 F -0.117 7.117 17 F -0.201 7.201 18 F -0.266 7.266 19 C -0.131 4.131 20 C 0.301 3.699 21 O -0.457 6.457 22 C -0.175 4.175 23 C -0.433 4.433 24 Si 0.832 3.168 25 H -0.223 1.223 26 H -0.183 1.183 27 H -0.178 1.178 28 C -0.089 4.089 29 C -0.143 4.143 30 N -0.166 5.166 31 H 0.108 0.892 32 H 0.076 0.924 33 H 0.066 0.934 34 H 0.143 0.857 35 H 0.098 0.902 36 H 0.219 0.781 37 H 0.147 0.853 38 H 0.129 0.871 39 H 0.096 0.904 40 H 0.166 0.834 41 H 0.242 0.758 42 H 0.246 0.754 43 H 0.196 0.804 44 H 0.169 0.831 45 H 0.147 0.853 46 H 0.131 0.869 47 H 0.093 0.907 48 H 0.094 0.906 49 H 0.098 0.902 50 H 0.086 0.914 51 H 0.135 0.865 Dipole moment (debyes) X Y Z Total from point charges -20.138 -4.038 4.133 20.951 hybrid contribution 3.125 0.385 -0.193 3.154 sum -17.013 -3.653 3.940 17.841 Atomic orbital electron populations 1.21977 0.93939 1.03554 1.02193 1.21936 0.96038 0.76748 1.05117 1.48851 1.35550 1.10554 1.21040 1.23082 0.94083 0.94749 0.96466 1.20420 1.09057 0.96013 1.02415 1.20201 0.80259 0.99694 0.93915 1.48233 1.14278 1.29529 1.41101 1.20748 1.04388 0.82316 0.90098 1.20771 0.85018 0.99298 0.99560 1.22411 1.04025 0.90287 0.91020 1.22191 0.86656 0.99491 0.96624 1.22389 0.90031 1.00514 1.00540 1.27637 0.30901 0.98699 1.09336 1.99964 1.26797 1.90421 1.91331 1.99913 1.48389 1.78248 1.94462 1.99950 1.98030 1.86993 1.26736 1.99932 1.93615 1.38613 1.87981 1.99928 1.89760 1.89156 1.47746 1.21948 0.96158 0.95530 0.99497 1.21312 0.82999 0.83641 0.81917 1.90739 1.27657 1.74683 1.52579 1.21678 0.99842 0.94797 1.01209 1.25102 1.00439 1.08584 1.09157 0.84531 0.78938 0.75783 0.77597 1.22345 1.18315 1.17799 1.22726 0.94951 0.95539 0.95642 1.20507 1.03439 0.90083 1.00288 1.77323 1.26086 0.97916 1.15278 0.89225 0.92392 0.93371 0.85700 0.90168 0.78103 0.85285 0.87069 0.90394 0.83409 0.75838 0.75421 0.80366 0.83116 0.85322 0.86921 0.90715 0.90615 0.90212 0.91378 0.86523 Number of geometries 1 Number of calculations of the screened coulomb radii 3 The total number of SCF iterations 275. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 1.03 10.10 71.98 0.73 1.76 16 2 C 0.12 -0.95 7.23 86.38 0.62 -0.33 16 3 N -0.38 1.56 3.68 -348.07 -1.28 0.28 16 4 C 0.06 -0.61 9.89 83.54 0.83 0.22 16 5 C -0.27 2.91 5.48 -20.14 -0.11 2.79 16 6 C 0.18 -3.13 5.31 85.63 0.45 -2.67 16 7 N -0.60 6.49 2.45 -830.52 -2.03 4.46 16 8 C 0.15 -1.76 5.48 85.63 0.47 -1.29 16 9 C -0.04 0.53 5.46 -19.87 -0.11 0.42 16 10 C -0.06 1.29 9.70 22.27 0.22 1.51 16 11 C -0.03 0.64 10.05 22.27 0.22 0.87 16 12 C -0.12 0.83 8.62 22.27 0.19 1.02 16 13 C 0.34 1.16 4.82 22.27 0.11 1.27 16 14 F -0.09 -2.31 16.67 44.97 0.75 -1.56 16 15 F -0.21 -4.19 15.32 44.97 0.69 -3.50 16 16 F -0.12 -2.45 15.30 44.97 0.69 -1.76 16 17 F -0.20 -3.67 15.31 44.97 0.69 -2.98 16 18 F -0.27 -6.28 15.32 44.97 0.69 -5.59 16 19 C -0.11 0.02 8.14 22.27 0.18 0.21 16 20 C 0.51 -1.41 7.63 87.66 0.67 -0.74 16 21 O -0.58 -4.54 14.82 -3.04 -0.05 -4.58 16 22 C -0.14 1.09 3.68 29.85 0.11 1.20 16 23 C -0.34 0.95 3.75 71.98 0.27 1.21 16 24 Si 1.00 -4.22 29.30 68.60 2.01 -2.21 16 25 H -0.30 -0.70 7.11 99.48 0.71 0.01 16 26 H -0.26 1.07 7.11 99.48 0.71 1.78 16 27 H -0.25 1.42 7.11 99.48 0.71 2.13 16 28 C 0.08 -0.49 7.22 43.10 0.31 -0.18 16 29 C -0.09 1.11 8.86 71.24 0.63 1.74 16 30 N -0.34 -0.15 12.42 -47.38 -0.59 -0.74 16 31 H 0.09 -0.84 8.14 -2.39 -0.02 -0.86 16 32 H 0.06 -0.33 8.14 -2.39 -0.02 -0.35 16 33 H 0.05 -0.07 8.14 -2.39 -0.02 -0.09 16 34 H 0.12 -1.73 8.07 -2.39 -0.02 -1.75 16 35 H 0.08 -0.55 8.14 -2.39 -0.02 -0.57 16 36 H 0.20 -3.37 7.10 -2.91 -0.02 -3.39 16 37 H 0.13 -3.17 7.50 -2.39 -0.02 -3.19 16 38 H 0.11 -2.29 6.72 -2.39 -0.02 -2.30 16 39 H 0.08 -0.40 7.44 -2.39 -0.02 -0.42 16 40 H 0.15 -2.90 4.79 -2.38 -0.01 -2.91 16 41 H 0.23 -7.26 8.05 -2.91 -0.02 -7.28 16 42 H 0.23 -6.54 8.06 -2.91 -0.02 -6.56 16 43 H 0.18 -1.15 7.40 -2.91 -0.02 -1.17 16 44 H 0.15 1.13 6.74 -2.91 -0.02 1.11 16 45 H 0.13 -1.83 7.30 -2.39 -0.02 -1.85 16 46 H 0.11 -1.35 5.00 -2.39 -0.01 -1.36 16 47 H 0.07 0.01 7.96 -2.39 -0.02 -0.01 16 48 H 0.07 0.06 7.88 -2.39 -0.02 0.04 16 49 H 0.08 -1.03 7.68 -2.39 -0.02 -1.05 16 50 H 0.07 -0.71 8.14 -2.39 -0.02 -0.73 16 51 H 0.12 -2.59 6.54 -2.39 -0.02 -2.60 16 Total: 0.00 -51.65 438.24 9.09 -42.56 By element: Atomic # 1 Polarization: -35.11 SS G_CDS: 1.73 Total: -33.38 kcal Atomic # 6 Polarization: 3.22 SS G_CDS: 5.79 Total: 9.01 kcal Atomic # 7 Polarization: 7.89 SS G_CDS: -3.90 Total: 3.99 kcal Atomic # 8 Polarization: -4.54 SS G_CDS: -0.05 Total: -4.58 kcal Atomic # 9 Polarization: -18.89 SS G_CDS: 3.50 Total: -15.39 kcal Atomic # 14 Polarization: -4.22 SS G_CDS: 2.01 Total: -2.21 kcal Total: -51.65 9.09 -42.56 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_275550_18161096_17777120_13179792.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 488.022 kcal (2) G-P(sol) polarization free energy of solvation -51.653 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 436.369 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 9.094 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.560 kcal (6) G-S(sol) free energy of system = (1) + (5) 445.462 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 20.25 seconds