Wall clock time and date at job start Thu Apr 15 2021 09:46:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.21283 * 1 3 3 C 1.50700 * 119.99803 * 2 1 4 4 C 1.53004 * 109.47208 * 359.97438 * 3 2 1 5 5 Si 1.86298 * 109.47085 * 179.97438 * 4 3 2 6 6 H 1.48501 * 109.47220 * 60.00249 * 5 4 3 7 7 H 1.48508 * 109.46860 * 179.97438 * 5 4 3 8 8 H 1.48500 * 109.47235 * 299.99778 * 5 4 3 9 9 N 1.34777 * 120.00463 * 179.72122 * 2 1 3 10 10 C 1.46496 * 120.00345 * 179.97438 * 9 2 1 11 11 C 1.53005 * 109.46942 * 90.00092 * 10 9 2 12 12 C 1.52997 * 109.46791 * 179.97438 * 11 10 9 13 13 O 1.42907 * 109.46668 * 180.02562 * 12 11 10 14 14 C 1.42900 * 113.99882 * 179.97438 * 13 12 11 15 15 C 1.52995 * 109.47188 * 180.02562 * 14 13 12 16 16 F 1.39890 * 109.47372 * 60.00056 * 15 14 13 17 17 F 1.39902 * 109.47200 * 180.02562 * 15 14 13 18 18 F 1.39907 * 109.46977 * 300.00000 * 15 14 13 19 19 C 1.46497 * 119.99525 * 0.02562 * 9 2 1 20 20 C 1.50709 * 109.47273 * 89.99834 * 19 9 2 21 21 C 1.38211 * 119.99871 * 270.27188 * 20 19 9 22 22 C 1.38252 * 119.99782 * 180.02562 * 21 20 19 23 Xx 1.81004 * 119.99836 * 179.97438 * 22 21 20 24 23 F 6.99881 * 49.63355 * 249.21025 * 2 1 3 25 24 F 1.61003 * 90.00045 * 134.99907 * 23 22 21 26 25 F 1.61006 * 89.99846 * 314.99577 * 23 22 21 27 26 F 1.61006 * 89.99836 * 224.99911 * 23 22 21 28 27 F 1.60997 * 90.00055 * 44.99834 * 23 22 21 29 28 C 1.38216 * 120.00424 * 359.95354 * 22 21 20 30 29 C 1.38256 * 119.99516 * 0.02562 * 29 22 21 31 30 C 1.38213 * 120.00497 * 359.77232 * 30 29 22 32 31 H 1.09009 * 109.47352 * 119.99681 * 3 2 1 33 32 H 1.08998 * 109.47585 * 239.99969 * 3 2 1 34 33 H 1.09000 * 109.46887 * 300.00372 * 4 3 2 35 34 H 1.08998 * 109.46846 * 59.99549 * 4 3 2 36 35 H 1.08995 * 109.47364 * 210.00706 * 10 9 2 37 36 H 1.09002 * 109.47090 * 330.00257 * 10 9 2 38 37 H 1.08998 * 109.46999 * 300.00039 * 11 10 9 39 38 H 1.08997 * 109.46656 * 60.00331 * 11 10 9 40 39 H 1.08998 * 109.47437 * 299.99839 * 12 11 10 41 40 H 1.08997 * 109.47195 * 60.00730 * 12 11 10 42 41 H 1.09003 * 109.47173 * 300.00241 * 14 13 12 43 42 H 1.08999 * 109.47009 * 60.00199 * 14 13 12 44 43 H 1.09000 * 109.46889 * 209.99487 * 19 9 2 45 44 H 1.09001 * 109.47460 * 330.00097 * 19 9 2 46 45 H 1.07996 * 120.00138 * 359.97380 * 21 20 19 47 46 H 1.07990 * 120.00359 * 180.02562 * 29 22 21 48 47 H 1.07996 * 119.99862 * 179.97438 * 30 29 22 49 48 H 1.07995 * 120.00792 * 180.02562 * 31 30 29 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.2128 0.0000 0.0000 3 6 1.9663 1.3051 0.0000 4 6 0.9720 2.4681 -0.0006 5 14 1.9035 4.0815 0.0001 6 1 2.7581 4.1603 -1.2118 7 1 0.9383 5.2102 -0.0011 8 1 2.7563 4.1601 1.2133 9 7 1.8868 -1.1671 0.0057 10 6 3.3518 -1.1671 0.0051 11 6 3.8623 -1.1598 1.4475 12 6 5.3923 -1.1604 1.4468 13 8 5.8691 -1.1542 2.7940 14 6 7.2937 -1.1548 2.9063 15 6 7.6887 -1.1485 4.3844 16 9 7.1711 -2.2875 5.0103 17 9 9.0834 -1.1485 4.4944 18 9 7.1728 -0.0029 5.0001 19 6 1.1543 -2.4358 0.0113 20 6 0.9036 -2.8775 -1.4077 21 6 -0.2452 -2.4769 -2.0633 22 6 -0.4754 -2.8825 -3.3648 23 9 -3.3201 -1.8927 -4.9853 24 9 -1.1116 -2.0093 -5.5331 25 9 -2.8490 -2.7077 -2.9135 26 9 -2.1939 -3.8595 -4.7651 27 9 -1.7667 -0.8575 -3.6815 28 6 0.4437 -3.6878 -4.0106 29 6 1.5931 -4.0881 -3.3548 30 6 1.8254 -3.6793 -2.0552 31 1 2.5930 1.3630 0.8901 32 1 2.5930 1.3630 -0.8899 33 1 0.3457 2.4100 -0.8908 34 1 0.3450 2.4104 0.8891 35 1 3.7149 -2.0596 -0.5044 36 1 3.7149 -0.2797 -0.5134 37 1 3.4991 -0.2672 1.9569 38 1 3.4992 -2.0472 1.9658 39 1 5.7551 -2.0532 0.9375 40 1 5.7557 -0.2732 0.9283 41 1 7.6955 -2.0475 2.4270 42 1 7.6970 -0.2675 2.4183 43 1 1.7433 -3.1931 0.5288 44 1 0.2017 -2.3032 0.5241 45 1 -0.9635 -1.8478 -1.5587 46 1 0.2641 -4.0043 -5.0274 47 1 2.3112 -4.7177 -3.8593 48 1 2.7234 -3.9916 -1.5430 RHF calculation, no. of doubly occupied orbitals= 79 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. SCF OSCILLATION -- NSTAR INDEX INCREASED BY ONE SCF OSCILLATION -- NSTAR INDEX INCREASED BY ONE SCF OSCILLATION -- NSTAR INDEX INCREASED BY ONE CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_275550_18170402_18164856_13179792.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Apr 15 2021 09:46:52 Heat of formation + Delta-G solvation = 161.823238 kcal Electronic energy + Delta-G solvation = -42747.189227 eV Core-core repulsion = 35750.791998 eV Total energy + Delta-G solvation = -6996.397228 eV No. of doubly occupied orbitals = 79 Molecular weight (most abundant/longest-lived isotopes) = 427.131 amu Computer time = 49.96 seconds Orbital eigenvalues (eV) -51.06560 -48.62778 -48.56693 -44.41014 -44.26892 -44.21737 -44.12545 -43.55335 -41.63505 -40.53381 -39.17826 -37.24599 -34.60382 -33.38606 -32.58796 -32.33339 -30.39987 -28.15562 -26.41419 -24.71046 -24.19207 -23.89365 -22.74574 -22.52791 -20.04050 -19.59568 -19.56122 -18.68223 -18.39044 -18.15626 -17.54914 -17.09141 -16.98197 -16.93679 -16.71327 -15.96027 -15.66471 -15.51242 -15.45762 -15.34886 -15.26230 -15.18044 -15.03131 -15.01387 -14.96603 -14.87755 -14.78751 -14.73393 -14.73023 -14.48915 -14.37555 -14.19966 -14.18317 -14.07230 -14.03882 -13.92395 -13.64892 -13.62214 -13.46938 -13.40529 -13.29611 -13.20167 -12.87728 -12.75251 -12.53756 -12.42069 -12.31697 -12.07262 -12.02167 -11.96192 -11.78102 -11.60094 -11.50530 -11.43163 -10.94538 -10.73605 -10.69415 -10.46994 -9.87142 -5.28654 -4.83036 -3.03569 -0.66991 -0.48131 1.44884 1.53117 1.60273 1.63005 1.65593 1.78736 2.08116 2.24636 2.46035 2.70492 2.92366 2.99270 3.05474 3.39833 3.50043 3.51716 3.68138 3.72087 3.91100 4.02873 4.06504 4.16966 4.18946 4.20654 4.29294 4.34543 4.37220 4.44435 4.49491 4.60654 4.66165 4.67931 4.75192 4.77019 4.82784 4.94686 4.98340 5.11637 5.18581 5.34631 5.37085 5.55424 6.00951 6.29763 7.16775 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.577 6.577 2 C 0.509 3.491 3 C -0.137 4.137 4 C -0.340 4.340 5 Si 1.007 2.993 6 H -0.261 1.261 7 H -0.297 1.297 8 H -0.262 1.262 9 N -0.606 5.606 10 C 0.104 3.896 11 C -0.141 4.141 12 C 0.058 3.942 13 O -0.403 6.403 14 C 0.027 3.973 15 C 0.449 3.551 16 F -0.190 7.190 17 F -0.182 7.182 18 F -0.193 7.193 19 C 0.148 3.852 20 C -0.045 4.045 21 C -0.113 4.113 22 C 0.315 3.685 23 F -0.223 7.223 24 F -0.159 7.159 25 F -0.169 7.169 26 F -0.159 7.159 27 F -0.161 7.161 28 C -0.115 4.115 29 C -0.031 4.031 30 C -0.058 4.058 31 H 0.122 0.878 32 H 0.126 0.874 33 H 0.073 0.927 34 H 0.078 0.922 35 H 0.130 0.870 36 H 0.105 0.895 37 H 0.060 0.940 38 H 0.078 0.922 39 H 0.089 0.911 40 H 0.076 0.924 41 H 0.125 0.875 42 H 0.119 0.881 43 H 0.159 0.841 44 H 0.079 0.921 45 H 0.149 0.851 46 H 0.180 0.820 47 H 0.230 0.770 48 H 0.227 0.773 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 19.820 -7.035 2.241 21.151 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.456 6.456 2 C 0.299 3.701 3 C -0.176 4.176 4 C -0.432 4.432 5 Si 0.835 3.165 6 H -0.186 1.186 7 H -0.223 1.223 8 H -0.186 1.186 9 N -0.338 5.338 10 C -0.018 4.018 11 C -0.179 4.179 12 C -0.018 4.018 13 O -0.324 6.324 14 C -0.051 4.051 15 C 0.395 3.605 16 F -0.172 7.172 17 F -0.164 7.164 18 F -0.174 7.174 19 C 0.026 3.974 20 C -0.047 4.047 21 C -0.132 4.132 22 C 0.311 3.689 23 F -0.223 7.223 24 F -0.158 7.158 25 F -0.168 7.168 26 F -0.157 7.157 27 F -0.159 7.159 28 C -0.133 4.133 29 C -0.047 4.047 30 C -0.075 4.075 31 H 0.140 0.860 32 H 0.144 0.856 33 H 0.092 0.908 34 H 0.096 0.904 35 H 0.148 0.852 36 H 0.123 0.877 37 H 0.079 0.921 38 H 0.096 0.904 39 H 0.107 0.893 40 H 0.095 0.905 41 H 0.143 0.857 42 H 0.137 0.863 43 H 0.177 0.823 44 H 0.098 0.902 45 H 0.167 0.833 46 H 0.197 0.803 47 H 0.246 0.754 48 H 0.243 0.757 Dipole moment (debyes) X Y Z Total from point charges 19.569 -6.232 2.471 20.685 hybrid contribution -2.468 0.644 -0.443 2.589 sum 17.101 -5.587 2.029 18.104 Atomic orbital electron populations 1.90748 1.16418 1.87919 1.50470 1.21374 0.87702 0.86839 0.74156 1.21635 0.99023 0.89871 1.07069 1.25068 1.04578 1.07708 1.05867 0.84467 0.77533 0.74594 0.79858 1.18553 1.22303 1.18576 1.48083 1.08041 1.04397 1.73289 1.21908 0.76561 1.07434 0.95859 1.21961 0.93712 1.04045 0.98213 1.22782 0.94436 1.03541 0.81047 1.87878 1.18089 1.96054 1.30334 1.23608 0.85107 1.08202 0.88210 1.20855 0.74356 0.73179 0.92068 1.93192 1.86751 1.51785 1.85455 1.93214 1.30079 1.96243 1.96841 1.93198 1.86854 1.51475 1.85896 1.20704 1.00351 0.87175 0.89189 1.20816 0.88566 0.97374 0.97935 1.21905 0.99961 1.01767 0.89542 1.27949 0.54342 1.02556 0.84097 2.00000 1.96228 1.81677 1.44383 1.99918 1.74022 1.89966 1.51861 1.99922 1.95577 1.96667 1.24646 1.99918 1.89601 1.54858 1.71362 1.99924 1.98954 1.69930 1.47136 1.22384 0.89908 0.95674 1.05289 1.22219 0.90822 0.97539 0.94153 1.22420 0.99676 0.91579 0.93840 0.85986 0.85572 0.90816 0.90351 0.85178 0.87704 0.92072 0.90356 0.89304 0.90529 0.85747 0.86295 0.82346 0.90230 0.83318 0.80287 0.75393 0.75674 Number of geometries 1 Number of calculations of the screened coulomb radii 10 The total number of SCF iterations 760. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.58 -3.83 15.07 -3.04 -0.05 -3.87 16 2 C 0.51 -2.30 7.67 87.66 0.67 -1.63 16 3 C -0.14 1.21 3.63 29.85 0.11 1.32 16 4 C -0.34 0.90 3.74 71.98 0.27 1.17 16 5 Si 1.01 -3.02 29.30 68.60 2.01 -1.01 16 6 H -0.26 0.77 7.11 99.48 0.71 1.48 16 7 H -0.30 -1.00 7.11 99.48 0.71 -0.29 16 8 H -0.26 0.73 7.11 99.48 0.71 1.44 16 9 N -0.61 8.47 2.46 -826.15 -2.03 6.44 16 10 C 0.10 -2.34 5.21 86.38 0.45 -1.89 16 11 C -0.14 2.59 5.91 30.59 0.18 2.77 16 12 C 0.06 -1.09 5.94 71.98 0.43 -0.67 16 13 O -0.40 3.99 10.23 -148.98 -1.52 2.46 16 14 C 0.03 -0.33 5.90 71.98 0.42 0.09 16 15 C 0.45 -1.72 3.32 71.98 0.24 -1.48 16 16 F -0.19 -0.03 17.26 44.97 0.78 0.74 16 17 F -0.18 0.46 17.32 44.97 0.78 1.23 16 18 F -0.19 -0.20 17.26 44.97 0.78 0.58 16 19 C 0.15 -2.27 5.53 85.64 0.47 -1.79 16 20 C -0.05 0.65 5.46 -19.86 -0.11 0.54 16 21 C -0.11 0.26 8.28 22.27 0.18 0.45 16 22 C 0.31 0.46 4.82 22.27 0.11 0.57 16 23 F -0.22 -6.70 16.66 44.97 0.75 -5.95 16 24 F -0.16 -2.79 15.32 44.97 0.69 -2.10 16 25 F -0.17 -3.60 15.31 44.97 0.69 -2.91 16 26 F -0.16 -2.81 15.31 44.97 0.69 -2.12 16 27 F -0.16 -3.47 15.31 44.97 0.69 -2.78 16 28 C -0.11 1.07 8.62 22.27 0.19 1.26 16 29 C -0.03 0.67 10.05 22.27 0.22 0.89 16 30 C -0.06 1.39 9.70 22.27 0.22 1.61 16 31 H 0.12 -1.65 6.98 -2.38 -0.02 -1.67 16 32 H 0.13 -1.86 7.23 -2.39 -0.02 -1.88 16 33 H 0.07 0.08 7.92 -2.39 -0.02 0.06 16 34 H 0.08 -0.01 7.92 -2.39 -0.02 -0.02 16 35 H 0.13 -3.97 8.07 -2.39 -0.02 -3.99 16 36 H 0.10 -2.56 6.45 -2.39 -0.02 -2.58 16 37 H 0.06 -0.84 7.19 -2.39 -0.02 -0.86 16 38 H 0.08 -1.34 8.14 -2.39 -0.02 -1.36 16 39 H 0.09 -2.16 8.14 -2.39 -0.02 -2.18 16 40 H 0.08 -1.67 8.14 -2.39 -0.02 -1.69 16 41 H 0.12 -2.23 8.14 -2.39 -0.02 -2.25 16 42 H 0.12 -2.00 8.14 -2.39 -0.02 -2.02 16 43 H 0.16 -3.90 8.02 -2.39 -0.02 -3.92 16 44 H 0.08 -0.65 7.37 -2.39 -0.02 -0.67 16 45 H 0.15 0.82 6.90 -2.91 -0.02 0.80 16 46 H 0.18 -1.60 7.40 -2.92 -0.02 -1.62 16 47 H 0.23 -7.04 8.06 -2.91 -0.02 -7.07 16 48 H 0.23 -7.91 8.06 -2.91 -0.02 -7.94 16 Total: 0.00 -54.39 440.16 10.08 -44.31 By element: Atomic # 1 Polarization: -40.02 SS G_CDS: 1.77 Total: -38.24 kcal Atomic # 6 Polarization: -0.83 SS G_CDS: 4.06 Total: 3.23 kcal Atomic # 7 Polarization: 8.47 SS G_CDS: -2.03 Total: 6.44 kcal Atomic # 8 Polarization: 0.16 SS G_CDS: -1.57 Total: -1.41 kcal Atomic # 9 Polarization: -19.15 SS G_CDS: 5.83 Total: -13.32 kcal Atomic # 14 Polarization: -3.02 SS G_CDS: 2.01 Total: -1.01 kcal Total: -54.39 10.08 -44.31 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_275550_18170402_18164856_13179792.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 206.134 kcal (2) G-P(sol) polarization free energy of solvation -54.391 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 151.743 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 10.081 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -44.310 kcal (6) G-S(sol) free energy of system = (1) + (5) 161.823 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 49.96 seconds