Wall clock time and date at job start Thu Apr 15 2021 11:25:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.36019 * 117.00029 * 2 1 4 4 C 1.38612 * 119.99572 * 0.27620 * 3 2 1 5 5 C 1.38170 * 120.03962 * 180.02562 * 4 3 2 6 6 C 1.38805 * 120.02497 * 0.02562 * 5 4 3 7 7 N 1.40099 * 120.00510 * 179.97438 * 6 5 4 8 8 C 1.46499 * 120.00172 * 246.73642 * 7 6 5 9 9 C 1.50697 * 109.47168 * 89.99874 * 8 7 6 10 10 C 1.38207 * 120.00388 * 270.27393 * 9 8 7 11 11 C 1.38256 * 120.00036 * 179.97438 * 10 9 8 12 12 C 1.38218 * 120.00334 * 359.97438 * 11 10 9 13 13 C 1.38251 * 119.99508 * 359.97193 * 12 11 10 14 Xx 1.80997 * 119.99861 * 179.97438 * 13 12 11 15 14 F 9.60239 * 153.65315 * 141.56738 * 4 1 2 16 15 F 1.61002 * 90.00084 * 314.99883 * 14 13 12 17 16 F 1.61004 * 90.00411 * 134.99819 * 14 13 12 18 17 F 1.61002 * 90.00254 * 44.99948 * 14 13 12 19 18 F 1.61000 * 90.00240 * 224.99880 * 14 13 12 20 19 C 1.38215 * 120.00311 * 359.81505 * 13 12 11 21 20 C 1.34783 * 119.99826 * 66.73779 * 7 6 5 22 21 O 1.21298 * 119.99650 * 184.45375 * 21 7 6 23 22 C 1.50691 * 120.00058 * 4.45617 * 21 7 6 24 23 C 1.53004 * 109.47223 * 174.47575 * 23 21 7 25 24 Si 1.86295 * 109.47315 * 179.97438 * 24 23 21 26 25 H 1.48510 * 109.47220 * 59.99625 * 25 24 23 27 26 H 1.48498 * 109.47452 * 179.97438 * 25 24 23 28 27 H 1.48501 * 109.47362 * 299.99837 * 25 24 23 29 28 C 1.38874 * 119.98495 * 359.97438 * 6 5 4 30 29 C 1.38230 * 119.96070 * 359.74842 * 29 6 5 31 30 F 1.35102 * 120.01032 * 179.97438 * 30 29 6 32 31 H 1.08999 * 109.47145 * 180.02562 * 1 2 3 33 32 H 1.09007 * 109.46627 * 299.99597 * 1 2 3 34 33 H 1.09000 * 109.47463 * 59.99283 * 1 2 3 35 34 H 1.08005 * 119.97733 * 359.97438 * 4 3 2 36 35 H 1.08002 * 119.98216 * 179.97438 * 5 4 3 37 36 H 1.09000 * 109.47465 * 210.00194 * 8 7 6 38 37 H 1.09002 * 109.46918 * 330.00228 * 8 7 6 39 38 H 1.07997 * 120.00170 * 359.97438 * 10 9 8 40 39 H 1.08000 * 119.99898 * 179.97438 * 11 10 9 41 40 H 1.07997 * 120.00080 * 179.97438 * 12 11 10 42 41 H 1.08000 * 120.00052 * 180.02562 * 20 13 12 43 42 H 1.09009 * 109.46950 * 294.47232 * 23 21 7 44 43 H 1.08997 * 109.47484 * 54.47436 * 23 21 7 45 44 H 1.09003 * 109.46483 * 299.99578 * 24 23 21 46 45 H 1.08997 * 109.47004 * 59.99567 * 24 23 21 47 46 H 1.07997 * 120.02003 * 179.97438 * 29 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0465 1.2119 0.0000 4 6 1.2915 2.3744 0.0058 5 6 1.9179 3.6060 0.0053 6 6 3.3039 3.6803 -0.0016 7 7 3.9386 4.9293 -0.0027 8 6 4.7112 5.3573 -1.1714 9 6 3.8097 6.0963 -2.1265 10 6 3.1303 5.4043 -3.1111 11 6 2.3028 6.0822 -3.9869 12 6 2.1545 7.4521 -3.8775 13 6 2.8333 8.1442 -2.8918 14 9 2.4708 11.5349 -2.6209 15 9 2.8010 10.0826 -4.3443 16 9 2.4785 9.7937 -1.1535 17 9 1.0471 9.7803 -2.9241 18 9 4.2324 10.0960 -2.5736 19 6 3.6571 7.4658 -2.0135 20 6 3.8383 5.7370 1.0716 21 8 4.3190 6.8503 1.0403 22 6 3.1290 5.2572 2.3115 23 6 3.2755 6.3021 3.4196 24 14 2.3980 5.7092 4.9522 25 1 2.9961 4.4257 5.3999 26 1 2.5407 6.7230 6.0279 27 1 0.9582 5.5058 4.6510 28 6 4.0614 2.5163 -0.0074 29 6 3.4342 1.2845 -0.0011 30 9 4.1700 0.1515 -0.0072 31 1 -0.3633 -1.0277 0.0005 32 1 -0.3633 0.5138 0.8901 33 1 -0.3634 0.5139 -0.8899 34 1 0.2130 2.3173 0.0099 35 1 1.3287 4.5111 0.0094 36 1 5.5193 6.0153 -0.8517 37 1 5.1302 4.4832 -1.6700 38 1 3.2457 4.3339 -3.1964 39 1 1.7722 5.5415 -4.7566 40 1 1.5084 7.9817 -4.5619 41 1 4.1871 8.0065 -1.2432 42 1 2.0720 5.1076 2.0906 43 1 3.5683 4.3153 2.6400 44 1 4.3324 6.4515 3.6404 45 1 2.8362 7.2439 3.0912 46 1 5.1398 2.5734 -0.0132 RHF calculation, no. of doubly occupied orbitals= 75 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. SCF OSCILLATION -- NSTAR INDEX INCREASED BY ONE SCF OSCILLATION -- NSTAR INDEX INCREASED BY ONE SCF OSCILLATION -- NSTAR INDEX INCREASED BY ONE CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_275550_18166606_18164856_13179792.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Apr 15 2021 11:25:15 Heat of formation + Delta-G solvation = 325.359629 kcal Electronic energy + Delta-G solvation = -40891.120634 eV Core-core repulsion = 34638.893504 eV Total energy + Delta-G solvation = -6252.227131 eV No. of doubly occupied orbitals = 75 Molecular weight (most abundant/longest-lived isotopes) = 411.118 amu Computer time = 41.62 seconds Orbital eigenvalues (eV) -49.81379 -44.39877 -44.25634 -44.20373 -44.11104 -43.54352 -42.09075 -40.98001 -40.51162 -38.74975 -36.35551 -34.15955 -33.09761 -32.43205 -31.82285 -30.32399 -28.43688 -27.71523 -25.13877 -24.10684 -23.80142 -23.41960 -22.64295 -20.72495 -19.29548 -18.70949 -18.45697 -18.00753 -17.75081 -17.14843 -17.06276 -16.91088 -16.62911 -16.04320 -15.99988 -15.83121 -15.68791 -15.35437 -15.25754 -15.24306 -15.17980 -15.02251 -14.98619 -14.78646 -14.45907 -14.23380 -14.19949 -14.17794 -14.04648 -14.02031 -13.91251 -13.75148 -13.63469 -13.59476 -13.45733 -13.37825 -13.30905 -13.11209 -12.83556 -12.77209 -12.43761 -12.31050 -12.21851 -12.11620 -12.00145 -11.95067 -11.67577 -11.58611 -11.41544 -11.07296 -10.77971 -10.59771 -10.42844 -9.97238 -9.08138 -5.27319 -4.81720 -3.07484 -0.71661 -0.53535 0.01866 0.06790 1.40150 1.44031 1.57802 1.63610 1.67098 2.03082 2.14150 2.25476 2.41352 2.67171 2.94519 3.20370 3.36692 3.46701 3.53763 3.62489 3.73082 3.85319 3.92640 4.00313 4.06267 4.17683 4.23000 4.37000 4.37983 4.46087 4.48875 4.52395 4.59754 4.61433 4.69969 4.73538 4.82280 4.88631 4.92645 4.97371 5.01673 5.09647 5.11603 5.33150 5.39082 5.51371 6.16118 6.31808 6.98122 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.015 3.985 2 O -0.335 6.335 3 C 0.094 3.906 4 C -0.157 4.157 5 C -0.077 4.077 6 C 0.116 3.884 7 N -0.561 5.561 8 C 0.148 3.852 9 C -0.048 4.048 10 C -0.060 4.060 11 C -0.031 4.031 12 C -0.110 4.110 13 C 0.318 3.682 14 F -0.221 7.221 15 F -0.160 7.160 16 F -0.158 7.158 17 F -0.160 7.160 18 F -0.167 7.167 19 C -0.106 4.106 20 C 0.522 3.478 21 O -0.553 6.553 22 C -0.137 4.137 23 C -0.336 4.336 24 Si 1.002 2.998 25 H -0.266 1.266 26 H -0.290 1.290 27 H -0.264 1.264 28 C -0.101 4.101 29 C 0.059 3.941 30 F -0.146 7.146 31 H 0.109 0.891 32 H 0.072 0.928 33 H 0.078 0.922 34 H 0.167 0.833 35 H 0.152 0.848 36 H 0.099 0.901 37 H 0.153 0.847 38 H 0.210 0.790 39 H 0.227 0.773 40 H 0.183 0.817 41 H 0.158 0.842 42 H 0.120 0.880 43 H 0.117 0.883 44 H 0.085 0.915 45 H 0.081 0.919 46 H 0.161 0.839 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.476 -17.726 -3.001 18.311 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.079 4.079 2 O -0.249 6.249 3 C 0.048 3.952 4 C -0.176 4.176 5 C -0.096 4.096 6 C 0.025 3.975 7 N -0.289 5.289 8 C 0.027 3.973 9 C -0.049 4.049 10 C -0.078 4.078 11 C -0.048 4.048 12 C -0.127 4.127 13 C 0.314 3.686 14 F -0.221 7.221 15 F -0.159 7.159 16 F -0.157 7.157 17 F -0.159 7.159 18 F -0.166 7.166 19 C -0.124 4.124 20 C 0.313 3.687 21 O -0.429 6.429 22 C -0.176 4.176 23 C -0.428 4.428 24 Si 0.830 3.170 25 H -0.190 1.190 26 H -0.216 1.216 27 H -0.188 1.188 28 C -0.121 4.121 29 C 0.038 3.962 30 F -0.125 7.125 31 H 0.127 0.873 32 H 0.090 0.910 33 H 0.096 0.904 34 H 0.184 0.816 35 H 0.170 0.830 36 H 0.118 0.882 37 H 0.170 0.830 38 H 0.227 0.773 39 H 0.244 0.756 40 H 0.200 0.800 41 H 0.175 0.825 42 H 0.138 0.862 43 H 0.135 0.865 44 H 0.103 0.897 45 H 0.100 0.900 46 H 0.178 0.822 Dipole moment (debyes) X Y Z Total from point charges -3.514 -17.679 -2.226 18.162 hybrid contribution 0.205 2.261 0.092 2.272 sum -3.309 -15.418 -2.135 15.913 Atomic orbital electron populations 1.23440 0.75615 1.05711 1.03089 1.86173 1.24079 1.26371 1.88251 1.19363 0.90881 0.86471 0.98529 1.21244 1.01701 0.89737 1.04954 1.21343 0.92808 0.98529 0.96943 1.17049 0.90803 0.83310 1.06332 1.45461 1.52342 1.15725 1.15368 1.20875 0.91357 1.01271 0.83789 1.20623 1.00049 0.85439 0.98797 1.22288 0.91082 1.04118 0.90304 1.22131 0.97364 0.84963 1.00293 1.22341 1.00387 0.93020 0.96967 1.27851 1.06208 0.31619 1.02952 2.00000 1.68928 1.99505 1.53687 1.99918 1.87976 1.95731 1.32249 1.99923 1.84827 1.92100 1.38835 1.99919 1.51551 1.94195 1.70231 1.99921 1.47192 1.94422 1.75078 1.21867 0.98164 0.92850 0.99517 1.21310 0.78755 0.83984 0.84623 1.90769 1.48236 1.20871 1.83026 1.21613 1.03346 1.01037 0.91649 1.25039 1.08238 1.02758 1.06812 0.84528 0.78560 0.78404 0.75484 1.19018 1.21590 1.18775 1.21056 1.02027 0.88537 1.00467 1.17025 0.86312 0.82798 1.10018 1.91509 1.76899 1.49694 1.94426 0.87291 0.90967 0.90385 0.81572 0.83018 0.88243 0.82964 0.77330 0.75623 0.80025 0.82494 0.86192 0.86531 0.89657 0.90049 0.82169 Number of geometries 1 Number of calculations of the screened coulomb radii 10 The total number of SCF iterations 655. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.19 9.81 113.37 1.11 0.92 16 2 O -0.34 1.49 10.36 -93.77 -0.97 0.52 16 3 C 0.09 -0.72 6.69 22.53 0.15 -0.57 16 4 C -0.16 2.18 9.03 22.34 0.20 2.38 16 5 C -0.08 1.16 8.44 22.39 0.19 1.35 16 6 C 0.12 -1.57 4.43 38.11 0.17 -1.40 16 7 N -0.56 6.15 2.51 -635.19 -1.60 4.55 16 8 C 0.15 -2.01 5.44 85.63 0.47 -1.54 16 9 C -0.05 0.60 5.46 -19.87 -0.11 0.49 16 10 C -0.06 1.22 9.70 22.27 0.22 1.44 16 11 C -0.03 0.61 10.05 22.27 0.22 0.83 16 12 C -0.11 0.96 8.62 22.27 0.19 1.16 16 13 C 0.32 0.40 4.82 22.27 0.11 0.50 16 14 F -0.22 -6.46 16.67 44.97 0.75 -5.71 16 15 F -0.16 -2.76 15.31 44.97 0.69 -2.07 16 16 F -0.16 -3.23 15.31 44.97 0.69 -2.54 16 17 F -0.16 -2.72 15.32 44.97 0.69 -2.03 16 18 F -0.17 -3.37 15.31 44.97 0.69 -2.68 16 19 C -0.11 0.27 8.16 22.27 0.18 0.45 16 20 C 0.52 -2.15 7.53 87.65 0.66 -1.49 16 21 O -0.55 -2.60 14.85 -3.09 -0.05 -2.64 16 22 C -0.14 1.00 3.74 29.85 0.11 1.11 16 23 C -0.34 1.10 3.76 71.98 0.27 1.37 16 24 Si 1.00 -2.83 29.30 68.60 2.01 -0.82 16 25 H -0.27 0.51 7.11 99.48 0.71 1.21 16 26 H -0.29 -0.75 7.11 99.48 0.71 -0.04 16 27 H -0.26 0.61 7.11 99.48 0.71 1.32 16 28 C -0.10 1.19 9.61 22.42 0.22 1.41 16 29 C 0.06 -0.37 7.31 22.44 0.16 -0.21 16 30 F -0.15 -0.02 17.11 44.97 0.77 0.75 16 31 H 0.11 -1.42 8.14 -2.39 -0.02 -1.44 16 32 H 0.07 -1.05 7.65 -2.38 -0.02 -1.07 16 33 H 0.08 -1.24 7.67 -2.39 -0.02 -1.25 16 34 H 0.17 -2.97 6.29 -2.91 -0.02 -2.99 16 35 H 0.15 -2.61 7.91 -2.91 -0.02 -2.64 16 36 H 0.10 -0.96 7.43 -2.39 -0.02 -0.98 16 37 H 0.15 -3.23 7.77 -2.39 -0.02 -3.25 16 38 H 0.21 -5.83 8.06 -2.91 -0.02 -5.85 16 39 H 0.23 -6.39 8.06 -2.91 -0.02 -6.41 16 40 H 0.18 -1.60 7.40 -2.91 -0.02 -1.62 16 41 H 0.16 0.61 6.75 -2.91 -0.02 0.59 16 42 H 0.12 -1.39 6.81 -2.38 -0.02 -1.41 16 43 H 0.12 -1.24 7.84 -2.39 -0.02 -1.26 16 44 H 0.08 -0.17 7.96 -2.39 -0.02 -0.19 16 45 H 0.08 -0.05 7.86 -2.39 -0.02 -0.06 16 46 H 0.16 -2.26 8.06 -2.91 -0.02 -2.28 16 Total: 0.00 -44.09 417.64 10.00 -34.10 By element: Atomic # 1 Polarization: -31.42 SS G_CDS: 1.80 Total: -29.62 kcal Atomic # 6 Polarization: 3.68 SS G_CDS: 4.52 Total: 8.20 kcal Atomic # 7 Polarization: 6.15 SS G_CDS: -1.60 Total: 4.55 kcal Atomic # 8 Polarization: -1.11 SS G_CDS: -1.02 Total: -2.13 kcal Atomic # 9 Polarization: -18.55 SS G_CDS: 4.27 Total: -14.28 kcal Atomic # 14 Polarization: -2.83 SS G_CDS: 2.01 Total: -0.82 kcal Total: -44.09 10.00 -34.10 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_275550_18166606_18164856_13179792.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 359.458 kcal (2) G-P(sol) polarization free energy of solvation -44.094 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 315.364 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 9.996 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.098 kcal (6) G-S(sol) free energy of system = (1) + (5) 325.360 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 41.62 seconds