Wall clock time and date at job start Thu Apr 15 2021 12:48:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.36037 * 117.00135 * 2 1 4 4 C 1.39192 * 120.08761 * 264.67394 * 3 2 1 5 5 N 1.40126 * 120.07774 * 0.02732 * 4 3 2 6 6 C 1.46501 * 120.00410 * 94.60067 * 5 4 3 7 7 C 1.50702 * 109.47200 * 89.99969 * 6 5 4 8 8 C 1.38219 * 119.99951 * 270.27625 * 7 6 5 9 9 C 1.38252 * 119.99660 * 179.97438 * 8 7 6 10 10 C 1.38210 * 120.00485 * 359.97438 * 9 8 7 11 11 C 1.38260 * 120.00161 * 359.97438 * 10 9 8 12 Xx 1.80998 * 120.00553 * 179.97438 * 11 10 9 13 12 F 9.95908 * 101.02742 * 285.00772 * 2 1 3 14 13 F 1.61004 * 89.99773 * 315.00031 * 12 11 10 15 14 F 1.60995 * 90.00217 * 134.99637 * 12 11 10 16 15 F 1.61002 * 89.99719 * 44.99723 * 12 11 10 17 16 F 1.60999 * 89.99861 * 224.99977 * 12 11 10 18 17 C 1.38219 * 119.99471 * 359.80828 * 11 10 9 19 18 C 1.34780 * 119.99774 * 274.60083 * 5 4 3 20 19 O 1.21294 * 119.99798 * 175.14290 * 19 5 4 21 20 C 1.50697 * 119.99953 * 355.14180 * 19 5 4 22 21 C 1.52994 * 109.47108 * 185.35577 * 21 19 5 23 22 Si 1.86304 * 109.47315 * 180.02562 * 22 21 19 24 23 H 1.48494 * 109.47000 * 300.00113 * 23 22 21 25 24 H 1.48506 * 109.46995 * 59.99590 * 23 22 21 26 25 H 1.48495 * 109.47283 * 179.97438 * 23 22 21 27 26 C 1.38788 * 119.84575 * 179.97438 * 4 3 2 28 27 C 1.38171 * 120.02363 * 0.02568 * 27 4 3 29 28 C 1.38283 * 120.17942 * 359.97438 * 28 27 4 30 29 C 1.38418 * 120.15224 * 359.67653 * 29 28 27 31 30 F 1.35101 * 120.01392 * 180.02562 * 30 29 28 32 31 H 1.09004 * 109.47126 * 175.38225 * 1 2 3 33 32 H 1.08998 * 109.47627 * 295.38677 * 1 2 3 34 33 H 1.08999 * 109.46797 * 55.38521 * 1 2 3 35 34 H 1.08994 * 109.47230 * 209.99629 * 6 5 4 36 35 H 1.08997 * 109.47118 * 330.00116 * 6 5 4 37 36 H 1.07998 * 120.00028 * 359.97438 * 8 7 6 38 37 H 1.08002 * 119.99696 * 179.97438 * 9 8 7 39 38 H 1.08000 * 120.00304 * 179.97438 * 10 9 8 40 39 H 1.08002 * 119.99813 * 180.02562 * 18 11 10 41 40 H 1.09002 * 109.47312 * 305.35933 * 21 19 5 42 41 H 1.09004 * 109.46788 * 65.35523 * 21 19 5 43 42 H 1.09006 * 109.47285 * 299.99839 * 22 21 19 44 43 H 1.08994 * 109.47545 * 60.00344 * 22 21 19 45 44 H 1.07998 * 119.98606 * 180.02562 * 27 4 3 46 45 H 1.07998 * 119.90943 * 179.97438 * 28 27 4 47 46 H 1.08001 * 119.92674 * 179.97438 * 29 28 27 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0466 1.2121 0.0000 4 6 2.4630 1.7831 -1.1992 5 7 2.2465 1.1110 -2.4095 6 6 1.0560 1.4082 -3.2098 7 6 1.3651 2.5234 -4.1752 8 6 1.1641 3.8383 -3.7995 9 6 1.4483 4.8613 -4.6850 10 6 1.9338 4.5693 -5.9456 11 6 2.1359 3.2541 -6.3211 12 9 3.3339 2.5313 -9.4418 13 9 1.7443 3.9332 -8.6131 14 9 3.7979 1.8101 -7.3313 15 9 3.8749 4.0332 -7.8166 16 9 1.6672 1.7100 -8.1277 17 6 1.8561 2.2315 -5.4342 18 6 3.1337 0.1910 -2.8375 19 8 2.9035 -0.4536 -3.8388 20 6 4.4115 -0.0368 -2.0719 21 6 5.2938 -1.0266 -2.8351 22 14 6.8733 -1.3088 -1.8882 23 1 7.5946 -0.0201 -1.7336 24 1 6.5545 -1.8616 -0.5473 25 1 7.7293 -2.2701 -2.6287 26 6 3.0922 3.0201 -1.1934 27 6 3.3046 3.6822 0.0007 28 6 2.8913 3.1158 1.1926 29 6 2.2566 1.8857 1.1947 30 9 1.8536 1.3353 2.3608 31 1 -0.3633 -1.0244 -0.0827 32 1 -0.3634 0.4406 0.9284 33 1 -0.3633 0.5838 -0.8458 34 1 0.7601 0.5184 -3.7654 35 1 0.2424 1.7128 -2.5515 36 1 0.7851 4.0665 -2.8143 37 1 1.2908 5.8887 -4.3916 38 1 2.1554 5.3685 -6.6374 39 1 2.0143 1.2041 -5.7274 40 1 4.9409 0.9094 -1.9587 41 1 4.1779 -0.4424 -1.0875 42 1 4.7645 -1.9728 -2.9482 43 1 5.5275 -0.6211 -3.8194 44 1 3.4158 3.4654 -2.1225 45 1 3.7947 4.6445 0.0030 46 1 3.0597 3.6367 2.1236 RHF calculation, no. of doubly occupied orbitals= 75 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. SCF OSCILLATION -- NSTAR INDEX INCREASED BY ONE SCF OSCILLATION -- NSTAR INDEX INCREASED BY ONE SCF OSCILLATION -- NSTAR INDEX INCREASED BY ONE CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_275550_17774974_18164856_13179792.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Apr 15 2021 12:48:52 Heat of formation + Delta-G solvation = 328.092621 kcal Electronic energy + Delta-G solvation = -41746.325049 eV Core-core repulsion = 35494.216430 eV Total energy + Delta-G solvation = -6252.108619 eV No. of doubly occupied orbitals = 75 Molecular weight (most abundant/longest-lived isotopes) = 411.118 amu Computer time = 54.66 seconds Orbital eigenvalues (eV) -49.94238 -44.40139 -44.25706 -44.20868 -44.11202 -43.54522 -42.20111 -40.92322 -40.16560 -38.43614 -36.78188 -34.23612 -33.16789 -32.45669 -31.15341 -30.70623 -28.12505 -27.84693 -25.20736 -24.21358 -23.73913 -23.49900 -22.69606 -20.83981 -19.13431 -18.59092 -18.45363 -18.26123 -17.68420 -17.18403 -16.97839 -16.86364 -16.72286 -16.11289 -16.00572 -15.77572 -15.72325 -15.44147 -15.37433 -15.25603 -15.18225 -14.99111 -14.96707 -14.78617 -14.51829 -14.23620 -14.20834 -14.18084 -14.11742 -14.04530 -13.91488 -13.64849 -13.63640 -13.54781 -13.39535 -13.36319 -13.24201 -13.12378 -13.00286 -12.80773 -12.48085 -12.34063 -12.29278 -12.08646 -11.95142 -11.71868 -11.62555 -11.42266 -11.21076 -11.11274 -10.78182 -10.68975 -10.25354 -9.85291 -9.69483 -5.27487 -4.81710 -3.07586 -0.73013 -0.55021 -0.11836 -0.01292 1.36792 1.40886 1.54437 1.60497 1.64216 2.01222 2.12289 2.26844 2.64626 2.67142 2.92600 3.14825 3.34709 3.45305 3.53699 3.61930 3.80966 3.89888 3.94403 3.99664 4.12788 4.14494 4.23859 4.29040 4.35817 4.38485 4.40239 4.50767 4.56839 4.62512 4.68011 4.72780 4.78285 4.86819 4.88874 5.05350 5.10907 5.15342 5.22688 5.30192 5.32596 5.60298 6.06706 6.38678 6.95947 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.030 3.970 2 O -0.348 6.348 3 C 0.057 3.943 4 C 0.124 3.876 5 N -0.562 5.562 6 C 0.150 3.850 7 C -0.048 4.048 8 C -0.062 4.062 9 C -0.025 4.025 10 C -0.107 4.107 11 C 0.320 3.680 12 F -0.221 7.221 13 F -0.158 7.158 14 F -0.162 7.162 15 F -0.155 7.155 16 F -0.171 7.171 17 C -0.109 4.109 18 C 0.528 3.472 19 O -0.555 6.555 20 C -0.135 4.135 21 C -0.337 4.337 22 Si 1.003 2.997 23 H -0.258 1.258 24 H -0.270 1.270 25 H -0.285 1.285 26 C -0.099 4.099 27 C -0.066 4.066 28 C -0.126 4.126 29 C 0.063 3.937 30 F -0.147 7.147 31 H 0.099 0.901 32 H 0.050 0.950 33 H 0.068 0.932 34 H 0.096 0.904 35 H 0.144 0.856 36 H 0.213 0.787 37 H 0.233 0.767 38 H 0.185 0.815 39 H 0.153 0.847 40 H 0.120 0.880 41 H 0.106 0.894 42 H 0.081 0.919 43 H 0.082 0.918 44 H 0.162 0.838 45 H 0.179 0.821 46 H 0.158 0.842 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.715 11.273 16.068 20.443 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.063 4.063 2 O -0.265 6.265 3 C 0.011 3.989 4 C 0.034 3.966 5 N -0.292 5.292 6 C 0.029 3.971 7 C -0.050 4.050 8 C -0.079 4.079 9 C -0.041 4.041 10 C -0.125 4.125 11 C 0.316 3.684 12 F -0.221 7.221 13 F -0.156 7.156 14 F -0.160 7.160 15 F -0.154 7.154 16 F -0.170 7.170 17 C -0.127 4.127 18 C 0.320 3.680 19 O -0.432 6.432 20 C -0.174 4.174 21 C -0.429 4.429 22 Si 0.831 3.169 23 H -0.182 1.182 24 H -0.195 1.195 25 H -0.211 1.211 26 C -0.118 4.118 27 C -0.085 4.085 28 C -0.144 4.144 29 C 0.043 3.957 30 F -0.125 7.125 31 H 0.118 0.882 32 H 0.069 0.931 33 H 0.086 0.914 34 H 0.114 0.886 35 H 0.162 0.838 36 H 0.230 0.770 37 H 0.250 0.750 38 H 0.202 0.798 39 H 0.171 0.829 40 H 0.138 0.862 41 H 0.124 0.876 42 H 0.100 0.900 43 H 0.101 0.899 44 H 0.180 0.820 45 H 0.197 0.803 46 H 0.176 0.824 Dipole moment (debyes) X Y Z Total from point charges -5.024 10.530 16.067 19.856 hybrid contribution -0.026 -1.280 -1.879 2.274 sum -5.050 9.250 14.188 17.674 Atomic orbital electron populations 1.23227 0.76927 1.04573 1.01599 1.86091 1.21764 1.24404 1.94256 1.19123 1.00776 0.87590 0.91409 1.17641 1.02909 0.93232 0.82854 1.45294 1.23843 1.40147 1.19887 1.20754 0.87566 0.96319 0.92451 1.20537 0.98275 0.98096 0.88043 1.22331 0.93648 0.89065 1.02876 1.22183 0.93259 1.04213 0.84479 1.22402 0.99259 0.92269 0.98567 1.27829 1.03310 0.93866 0.43443 2.00000 1.99869 1.26839 1.95390 1.99918 1.93450 1.24849 1.97432 1.99924 1.97966 1.39812 1.78319 1.99918 1.96061 1.20905 1.98511 1.99922 1.90299 1.37649 1.89106 1.21794 0.99221 1.01512 0.90161 1.21197 0.85240 0.77361 0.84248 1.90746 1.77484 1.47232 1.27697 1.21515 0.92873 1.02822 1.00185 1.25061 1.09164 1.02679 1.06000 0.84518 0.75239 0.79581 0.77570 1.18206 1.19500 1.21093 1.21694 0.96912 0.92341 1.00865 1.21371 0.96637 1.01143 0.89307 1.21602 0.97708 0.92881 1.02235 1.18363 1.02342 0.94436 0.80577 1.91505 1.88855 1.85736 1.46452 0.88220 0.93142 0.91383 0.88605 0.83829 0.76980 0.75028 0.79835 0.82922 0.86182 0.87593 0.90019 0.89923 0.82013 0.80349 0.82395 Number of geometries 1 Number of calculations of the screened coulomb radii 10 The total number of SCF iterations 669. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.23 11.13 113.37 1.26 1.04 16 2 O -0.35 0.75 10.02 -93.97 -0.94 -0.19 16 3 C 0.06 -0.38 5.75 22.62 0.13 -0.25 16 4 C 0.12 -1.41 3.93 38.18 0.15 -1.26 16 5 N -0.56 4.56 2.24 -634.89 -1.42 3.14 16 6 C 0.15 -1.78 5.56 85.63 0.48 -1.31 16 7 C -0.05 0.63 5.46 -19.86 -0.11 0.52 16 8 C -0.06 1.38 9.12 22.27 0.20 1.58 16 9 C -0.02 0.55 10.05 22.27 0.22 0.77 16 10 C -0.11 1.14 8.62 22.27 0.19 1.33 16 11 C 0.32 0.07 4.82 22.27 0.11 0.17 16 12 F -0.22 -6.38 16.66 44.97 0.75 -5.63 16 13 F -0.16 -2.58 15.31 44.97 0.69 -1.90 16 14 F -0.16 -3.26 15.31 44.97 0.69 -2.57 16 15 F -0.16 -2.48 15.32 44.97 0.69 -1.79 16 16 F -0.17 -3.43 15.31 44.97 0.69 -2.74 16 17 C -0.11 0.33 8.28 22.27 0.18 0.51 16 18 C 0.53 -0.20 7.63 87.66 0.67 0.47 16 19 O -0.55 -4.38 15.31 -3.07 -0.05 -4.43 16 20 C -0.13 0.39 3.91 29.85 0.12 0.50 16 21 C -0.34 -0.07 3.76 71.98 0.27 0.20 16 22 Si 1.00 -0.21 29.30 68.60 2.01 1.80 16 23 H -0.26 0.13 7.11 99.48 0.71 0.84 16 24 H -0.27 -0.40 7.11 99.48 0.71 0.31 16 25 H -0.29 -1.25 7.11 99.48 0.71 -0.54 16 26 C -0.10 1.71 9.67 22.39 0.22 1.93 16 27 C -0.07 1.22 10.04 22.26 0.22 1.45 16 28 C -0.13 1.65 10.02 22.32 0.22 1.87 16 29 C 0.06 -0.41 7.31 22.44 0.16 -0.24 16 30 F -0.15 0.05 17.11 44.97 0.77 0.82 16 31 H 0.10 -0.76 8.14 -2.39 -0.02 -0.78 16 32 H 0.05 -0.37 8.14 -2.39 -0.02 -0.39 16 33 H 0.07 -0.84 7.14 -2.39 -0.02 -0.85 16 34 H 0.10 -0.66 7.30 -2.39 -0.02 -0.68 16 35 H 0.14 -2.77 6.99 -2.39 -0.02 -2.79 16 36 H 0.21 -6.49 8.06 -2.91 -0.02 -6.52 16 37 H 0.23 -7.30 8.06 -2.91 -0.02 -7.33 16 38 H 0.18 -1.97 7.40 -2.91 -0.02 -1.99 16 39 H 0.15 0.63 7.17 -2.91 -0.02 0.61 16 40 H 0.12 -0.99 7.85 -2.39 -0.02 -1.00 16 41 H 0.11 -0.37 7.96 -2.39 -0.02 -0.39 16 42 H 0.08 0.20 7.86 -2.38 -0.02 0.18 16 43 H 0.08 0.15 7.96 -2.39 -0.02 0.13 16 44 H 0.16 -3.45 7.77 -2.91 -0.02 -3.47 16 45 H 0.18 -4.33 8.06 -2.91 -0.02 -4.35 16 46 H 0.16 -2.44 8.06 -2.91 -0.02 -2.46 16 Total: 0.00 -46.02 422.18 10.37 -35.65 By element: Atomic # 1 Polarization: -33.27 SS G_CDS: 1.80 Total: -31.47 kcal Atomic # 6 Polarization: 4.60 SS G_CDS: 4.70 Total: 9.30 kcal Atomic # 7 Polarization: 4.56 SS G_CDS: -1.42 Total: 3.14 kcal Atomic # 8 Polarization: -3.63 SS G_CDS: -0.99 Total: -4.62 kcal Atomic # 9 Polarization: -18.08 SS G_CDS: 4.27 Total: -13.81 kcal Atomic # 14 Polarization: -0.21 SS G_CDS: 2.01 Total: 1.80 kcal Total: -46.02 10.37 -35.65 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_275550_17774974_18164856_13179792.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 363.743 kcal (2) G-P(sol) polarization free energy of solvation -46.023 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 317.720 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 10.373 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.650 kcal (6) G-S(sol) free energy of system = (1) + (5) 328.093 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 54.67 seconds