Wall clock time and date at job start Thu Apr 22 2021 09:37:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.21283 * 1 3 3 C 1.50700 * 119.99803 * 2 1 4 4 C 1.53004 * 109.47208 * 359.97438 * 3 2 1 5 5 Si 1.86298 * 109.47085 * 179.97438 * 4 3 2 6 6 H 1.48508 * 109.46860 * 179.97438 * 5 4 3 7 7 H 1.48500 * 109.47235 * 299.99778 * 5 4 3 8 8 H 1.48501 * 109.47220 * 60.00249 * 5 4 3 9 9 N 1.34777 * 120.00463 * 179.72122 * 2 1 3 10 10 C 1.46496 * 120.00345 * 179.97438 * 9 2 1 11 11 C 1.53005 * 109.46942 * 90.00092 * 10 9 2 12 12 N 1.46496 * 109.46942 * 179.97438 * 11 10 9 13 13 C 1.34782 * 119.99917 * 180.02562 * 12 11 10 14 14 O 1.21555 * 119.99832 * 359.97438 * 13 12 11 15 15 C 1.47766 * 119.99800 * 180.02562 * 13 12 11 16 16 C 1.39585 * 120.16083 * 0.27176 * 15 13 12 17 17 C 1.37933 * 119.86772 * 180.02562 * 16 15 13 18 18 C 1.38377 * 120.18297 * 0.02562 * 17 16 15 19 19 C 1.38305 * 120.31784 * 359.97438 * 18 17 16 20 20 C 1.38112 * 120.13114 * 359.72109 * 19 18 17 21 21 Cl 1.73604 * 120.09687 * 180.02562 * 20 19 18 22 22 C 1.46497 * 119.99525 * 0.02562 * 9 2 1 23 23 C 1.50709 * 109.47273 * 89.99834 * 22 9 2 24 24 C 1.38211 * 119.99871 * 270.27188 * 23 22 9 25 25 C 1.38252 * 119.99782 * 180.02562 * 24 23 22 26 26 C 1.38211 * 120.00214 * 359.97298 * 25 24 23 27 27 C 1.38254 * 120.00011 * 359.97438 * 26 25 24 28 Xx 1.81004 * 120.00000 * 179.97438 * 27 26 25 29 28 F 8.27956 * 108.69065 * 219.15838 * 2 1 3 30 29 F 1.60997 * 89.99985 * 315.00076 * 28 27 26 31 30 F 1.61002 * 89.99806 * 134.99869 * 28 27 26 32 31 F 1.61003 * 89.99910 * 45.00248 * 28 27 26 33 32 F 1.60998 * 90.00114 * 224.99779 * 28 27 26 34 33 C 1.38213 * 120.00219 * 359.81119 * 27 26 25 35 34 H 1.09009 * 109.47352 * 119.99681 * 3 2 1 36 35 H 1.08998 * 109.47585 * 239.99969 * 3 2 1 37 36 H 1.09000 * 109.46887 * 300.00372 * 4 3 2 38 37 H 1.08998 * 109.46846 * 59.99549 * 4 3 2 39 38 H 1.08995 * 109.47364 * 210.00706 * 10 9 2 40 39 H 1.09002 * 109.47090 * 330.00257 * 10 9 2 41 40 H 1.08998 * 109.46999 * 300.00039 * 11 10 9 42 41 H 1.08997 * 109.46656 * 60.00331 * 11 10 9 43 42 H 0.97002 * 120.00234 * 0.02562 * 12 11 10 44 43 H 1.08003 * 120.06219 * 359.97438 * 16 15 13 45 44 H 1.08005 * 119.90878 * 180.02562 * 17 16 15 46 45 H 1.08003 * 119.84212 * 179.97438 * 18 17 16 47 46 H 1.08003 * 119.93821 * 180.02562 * 19 18 17 48 47 H 1.09000 * 109.46889 * 209.99487 * 22 9 2 49 48 H 1.09001 * 109.47460 * 330.00097 * 22 9 2 50 49 H 1.07996 * 120.00138 * 359.97380 * 24 23 22 51 50 H 1.08001 * 120.00158 * 179.97438 * 25 24 23 52 51 H 1.08008 * 120.00240 * 179.97438 * 26 25 24 53 52 H 1.07993 * 120.00435 * 180.02562 * 34 27 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.2128 0.0000 0.0000 3 6 1.9663 1.3051 0.0000 4 6 0.9720 2.4681 -0.0006 5 14 1.9035 4.0815 0.0001 6 1 0.9383 5.2102 -0.0011 7 1 2.7563 4.1601 1.2133 8 1 2.7581 4.1603 -1.2118 9 7 1.8868 -1.1671 0.0057 10 6 3.3518 -1.1671 0.0051 11 6 3.8623 -1.1598 1.4475 12 7 5.3273 -1.1604 1.4469 13 6 6.0016 -1.1551 2.6139 14 8 5.3942 -1.1493 3.6668 15 6 7.4793 -1.1551 2.6133 16 6 8.1801 -1.1549 1.4061 17 6 9.5594 -1.1554 1.4126 18 6 10.2495 -1.1567 2.6120 19 6 9.5628 -1.1570 3.8126 20 6 8.1817 -1.1501 3.8213 21 17 7.3207 -1.1497 5.3288 22 6 1.1543 -2.4358 0.0113 23 6 0.9036 -2.8775 -1.4077 24 6 -0.2452 -2.4769 -2.0633 25 6 -0.4754 -2.8825 -3.3648 26 6 0.4435 -3.6881 -4.0104 27 6 1.5933 -4.0879 -3.3549 28 9 3.8661 -6.0814 -4.9525 29 9 1.5991 -6.0714 -4.7456 30 9 3.9937 -4.2155 -3.6548 31 9 2.6811 -4.2218 -5.5152 32 9 2.9118 -6.0651 -2.8852 33 6 1.8256 -3.6788 -2.0553 34 1 2.5930 1.3630 0.8901 35 1 2.5930 1.3630 -0.8899 36 1 0.3457 2.4100 -0.8908 37 1 0.3450 2.4104 0.8891 38 1 3.7149 -2.0596 -0.5044 39 1 3.7149 -0.2797 -0.5134 40 1 3.4991 -0.2672 1.9569 41 1 3.4992 -2.0472 1.9658 42 1 5.8120 -1.1646 0.6067 43 1 7.6433 -1.1551 0.4689 44 1 10.1023 -1.1548 0.4789 45 1 11.3295 -1.1576 2.6107 46 1 10.1076 -1.1576 4.7451 47 1 1.7433 -3.1931 0.5288 48 1 0.2017 -2.3032 0.5241 49 1 -0.9635 -1.8478 -1.5587 50 1 -1.3733 -2.5699 -3.8771 51 1 0.2635 -4.0053 -5.0271 52 1 2.7239 -3.9908 -1.5434 RHF calculation, no. of doubly occupied orbitals= 83 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. SCF OSCILLATION -- NSTAR INDEX INCREASED BY ONE CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_275550_18172900_18164856_13179792.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Apr 22 2021 09:37:31 Heat of formation + Delta-G solvation = 368.942648 kcal Electronic energy + Delta-G solvation = -45680.677513 eV Core-core repulsion = 39035.267177 eV Total energy + Delta-G solvation = -6645.410336 eV No. of doubly occupied orbitals = 83 Molecular weight (most abundant/longest-lived isotopes) = 468.115 amu Computer time = 43.69 seconds Orbital eigenvalues (eV) -44.60288 -44.33242 -43.84651 -43.72486 -43.53004 -41.71749 -41.23152 -40.52900 -39.38767 -37.50348 -37.33475 -35.72698 -34.16623 -33.06672 -32.56972 -32.35292 -31.70063 -29.90470 -27.99668 -25.54635 -24.71397 -24.05960 -23.91816 -23.29194 -22.53111 -21.73526 -20.11076 -19.18028 -18.46441 -18.05536 -17.71932 -17.33695 -17.11206 -16.89034 -16.73060 -16.46663 -15.97007 -15.94083 -15.89023 -15.55774 -15.40363 -15.25348 -15.14202 -15.05009 -15.02911 -14.95697 -14.81516 -14.61809 -14.42991 -14.32252 -14.23921 -14.15958 -14.07427 -14.01664 -13.96376 -13.55743 -13.43421 -13.38588 -13.32892 -13.18889 -13.08358 -13.00620 -12.88787 -12.76375 -12.54520 -12.51417 -12.49644 -12.49279 -12.25900 -12.14203 -12.07848 -11.97779 -11.60960 -11.48222 -11.10158 -10.95280 -10.76350 -10.67903 -10.47970 -10.29086 -10.02545 -9.96840 -9.76937 -5.25419 -4.83037 -3.01214 -0.68542 -0.51989 -0.31765 0.15563 1.16243 1.45712 1.58128 1.62560 1.67895 1.69285 1.80784 1.99586 2.13013 2.40706 2.70605 2.71180 2.95583 3.38333 3.46885 3.57936 3.61246 3.66949 3.70173 3.84056 3.87998 3.93952 4.00020 4.08431 4.23006 4.26567 4.27310 4.30538 4.36541 4.46587 4.50445 4.53122 4.64504 4.66985 4.73683 4.76923 4.77229 4.93213 4.99684 5.04176 5.06247 5.08603 5.20198 5.26011 5.35968 5.37468 5.47443 5.71241 6.21572 6.44835 7.11679 7.17023 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.553 6.553 2 C 0.522 3.478 3 C -0.144 4.144 4 C -0.325 4.325 5 Si 0.995 3.005 6 H -0.290 1.290 7 H -0.281 1.281 8 H -0.265 1.265 9 N -0.605 5.605 10 C 0.093 3.907 11 C 0.101 3.899 12 N -0.709 5.709 13 C 0.551 3.449 14 O -0.553 6.553 15 C -0.153 4.153 16 C -0.068 4.068 17 C -0.122 4.122 18 C -0.079 4.079 19 C -0.133 4.133 20 C -0.012 4.012 21 Cl -0.061 7.061 22 C 0.149 3.851 23 C -0.042 4.042 24 C -0.069 4.069 25 C -0.040 4.040 26 C -0.114 4.114 27 C 0.347 3.653 28 F -0.075 7.075 29 F -0.214 7.214 30 F -0.112 7.112 31 F -0.216 7.216 32 F -0.257 7.257 33 C -0.102 4.102 34 H 0.109 0.891 35 H 0.125 0.875 36 H 0.094 0.906 37 H 0.084 0.916 38 H 0.109 0.891 39 H 0.119 0.881 40 H 0.067 0.933 41 H 0.066 0.934 42 H 0.417 0.583 43 H 0.169 0.831 44 H 0.166 0.834 45 H 0.161 0.839 46 H 0.145 0.855 47 H 0.121 0.879 48 H 0.120 0.880 49 H 0.185 0.815 50 H 0.214 0.786 51 H 0.179 0.821 52 H 0.184 0.816 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.809 7.424 -0.941 7.527 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.430 6.430 2 C 0.313 3.687 3 C -0.183 4.183 4 C -0.418 4.418 5 Si 0.826 3.174 6 H -0.215 1.215 7 H -0.206 1.206 8 H -0.189 1.189 9 N -0.338 5.338 10 C -0.030 4.030 11 C -0.024 4.024 12 N -0.364 5.364 13 C 0.338 3.662 14 O -0.431 6.431 15 C -0.157 4.157 16 C -0.086 4.086 17 C -0.140 4.140 18 C -0.097 4.097 19 C -0.151 4.151 20 C -0.040 4.040 21 Cl -0.032 7.032 22 C 0.027 3.973 23 C -0.044 4.044 24 C -0.087 4.087 25 C -0.057 4.057 26 C -0.132 4.132 27 C 0.342 3.658 28 F -0.075 7.075 29 F -0.213 7.213 30 F -0.111 7.111 31 F -0.215 7.215 32 F -0.255 7.255 33 C -0.120 4.120 34 H 0.127 0.873 35 H 0.143 0.857 36 H 0.112 0.888 37 H 0.103 0.897 38 H 0.128 0.872 39 H 0.137 0.863 40 H 0.085 0.915 41 H 0.084 0.916 42 H 0.255 0.745 43 H 0.187 0.813 44 H 0.183 0.817 45 H 0.179 0.821 46 H 0.163 0.837 47 H 0.139 0.861 48 H 0.138 0.862 49 H 0.202 0.798 50 H 0.230 0.770 51 H 0.196 0.804 52 H 0.201 0.799 Dipole moment (debyes) X Y Z Total from point charges -1.568 8.273 -0.028 8.420 hybrid contribution 1.059 -1.475 -0.566 1.902 sum -0.509 6.798 -0.594 6.843 Atomic orbital electron populations 1.90697 1.15012 1.87522 1.49730 1.21118 0.87868 0.85747 0.74010 1.21664 0.99457 0.90557 1.06645 1.24892 1.04143 1.05748 1.07019 0.84618 0.77724 0.76003 0.79098 1.21534 1.20578 1.18929 1.47909 1.06687 1.05250 1.73918 1.21985 0.78802 1.07252 0.94977 1.21801 0.79027 1.03019 0.98524 1.45532 1.07272 1.75241 1.08374 1.18293 0.87225 0.76496 0.84173 1.90893 1.70321 1.49801 1.32079 1.19859 0.93317 1.08851 0.93635 1.21674 0.95151 0.95289 0.96508 1.21679 0.94038 0.98457 0.99823 1.21767 1.02133 0.94624 0.91182 1.21352 0.91145 1.01524 1.01101 1.21363 0.93296 1.02099 0.87258 1.98419 1.77459 1.96300 1.30982 1.20676 1.01320 0.86204 0.89078 1.20605 0.91357 0.94776 0.97660 1.22202 0.96667 0.95669 0.94152 1.21957 0.97335 0.92400 0.93994 1.22225 0.87806 0.97983 1.05165 1.27431 0.72325 0.81486 0.84510 1.99964 1.18722 1.97630 1.91192 1.99914 1.26793 1.97901 1.96707 1.99949 1.96464 1.75581 1.39138 1.99934 1.63521 1.99953 1.58043 1.99928 1.70780 1.71703 1.83104 1.21876 1.03633 0.97846 0.88644 0.87283 0.85669 0.88770 0.89726 0.87236 0.86291 0.91487 0.91557 0.74478 0.81345 0.81654 0.82119 0.83716 0.86058 0.86242 0.79817 0.76963 0.80380 0.79856 Number of geometries 1 Number of calculations of the screened coulomb radii 3 The total number of SCF iterations 394. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 1.78 15.07 -3.04 -0.05 1.74 16 2 C 0.52 -4.82 7.67 87.66 0.67 -4.15 16 3 C -0.14 1.69 3.63 29.85 0.11 1.80 16 4 C -0.32 2.68 3.74 71.98 0.27 2.94 16 5 Si 0.99 -5.31 29.30 68.60 2.01 -3.30 16 6 H -0.29 0.04 7.11 99.48 0.71 0.74 16 7 H -0.28 0.56 7.11 99.48 0.71 1.27 16 8 H -0.27 1.23 7.11 99.48 0.71 1.94 16 9 N -0.61 8.28 2.46 -826.15 -2.03 6.25 16 10 C 0.09 -1.57 5.32 86.38 0.46 -1.11 16 11 C 0.10 -1.07 6.00 86.38 0.52 -0.55 16 12 N -0.71 6.32 5.51 -466.06 -2.57 3.75 16 13 C 0.55 0.52 7.77 86.76 0.67 1.19 16 14 O -0.55 -5.32 13.97 -3.89 -0.05 -5.37 16 15 C -0.15 0.05 5.88 -20.07 -0.12 -0.06 16 16 C -0.07 0.53 9.54 22.52 0.21 0.75 16 17 C -0.12 1.05 10.03 22.23 0.22 1.28 16 18 C -0.08 0.49 10.04 22.32 0.22 0.72 16 19 C -0.13 0.16 9.82 22.26 0.22 0.38 16 20 C -0.01 -0.04 6.35 22.60 0.14 0.10 16 21 Cl -0.06 -0.51 26.03 -2.72 -0.07 -0.58 16 22 C 0.15 -2.18 5.53 85.64 0.47 -1.71 16 23 C -0.04 0.58 5.46 -19.86 -0.11 0.47 16 24 C -0.07 1.04 9.70 22.27 0.22 1.26 16 25 C -0.04 0.62 10.05 22.27 0.22 0.84 16 26 C -0.11 0.91 8.62 22.27 0.19 1.10 16 27 C 0.35 -0.77 4.82 22.27 0.11 -0.66 16 28 F -0.08 -1.52 16.66 44.97 0.75 -0.77 16 29 F -0.21 -3.35 15.31 44.97 0.69 -2.66 16 30 F -0.11 -1.00 15.30 44.97 0.69 -0.31 16 31 F -0.22 -2.84 15.31 44.97 0.69 -2.16 16 32 F -0.26 -3.66 15.32 44.97 0.69 -2.98 16 33 C -0.10 0.93 8.28 22.27 0.18 1.11 16 34 H 0.11 -1.46 6.98 -2.38 -0.02 -1.47 16 35 H 0.13 -2.13 7.23 -2.39 -0.02 -2.15 16 36 H 0.09 -0.78 7.92 -2.39 -0.02 -0.80 16 37 H 0.08 -0.52 7.92 -2.39 -0.02 -0.54 16 38 H 0.11 -2.15 8.07 -2.39 -0.02 -2.17 16 39 H 0.12 -2.48 6.45 -2.39 -0.02 -2.49 16 40 H 0.07 -0.52 7.19 -2.39 -0.02 -0.54 16 41 H 0.07 -0.50 8.14 -2.39 -0.02 -0.52 16 42 H 0.42 -6.62 6.51 -92.71 -0.60 -7.22 16 43 H 0.17 -2.68 6.40 -2.91 -0.02 -2.70 16 44 H 0.17 -2.35 8.06 -2.91 -0.02 -2.37 16 45 H 0.16 -1.80 8.06 -2.91 -0.02 -1.82 16 46 H 0.15 -0.45 8.06 -2.91 -0.02 -0.48 16 47 H 0.12 -2.12 8.02 -2.39 -0.02 -2.14 16 48 H 0.12 -1.62 7.37 -2.39 -0.02 -1.63 16 49 H 0.18 -2.99 7.56 -2.91 -0.02 -3.01 16 50 H 0.21 -4.72 8.06 -2.91 -0.02 -4.74 16 51 H 0.18 -1.27 7.40 -2.91 -0.02 -1.29 16 52 H 0.18 -1.93 7.40 -2.91 -0.02 -1.96 16 Total: 0.00 -43.58 472.57 6.80 -36.78 By element: Atomic # 1 Polarization: -37.26 SS G_CDS: 1.16 Total: -36.10 kcal Atomic # 6 Polarization: 0.82 SS G_CDS: 4.90 Total: 5.71 kcal Atomic # 7 Polarization: 14.60 SS G_CDS: -4.60 Total: 10.00 kcal Atomic # 8 Polarization: -3.54 SS G_CDS: -0.10 Total: -3.64 kcal Atomic # 9 Polarization: -12.38 SS G_CDS: 3.50 Total: -8.88 kcal Atomic # 14 Polarization: -5.31 SS G_CDS: 2.01 Total: -3.30 kcal Atomic # 17 Polarization: -0.51 SS G_CDS: -0.07 Total: -0.58 kcal Total: -43.58 6.80 -36.78 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_275550_18172900_18164856_13179792.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 405.723 kcal (2) G-P(sol) polarization free energy of solvation -43.584 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 362.139 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 6.803 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.781 kcal (6) G-S(sol) free energy of system = (1) + (5) 368.943 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 43.69 seconds