Wall clock time and date at job start Thu Apr 22 2021 12:07:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 O 1.42985 * 109.44718 * 2 1 4 4 C 1.36081 * 116.71138 * 166.47060 * 3 2 1 5 5 C 1.38351 * 120.58502 * 147.15385 * 4 3 2 6 6 C 1.38300 * 119.96847 * 180.02562 * 5 4 3 7 7 C 1.38824 * 120.17550 * 0.02562 * 6 5 4 8 8 N 1.40108 * 119.97132 * 179.97438 * 7 6 5 9 9 C 1.46496 * 120.00231 * 246.74065 * 8 7 6 10 10 C 1.50703 * 109.46865 * 89.99694 * 9 8 7 11 11 C 1.38215 * 120.00239 * 270.27054 * 10 9 8 12 12 C 1.38254 * 120.00080 * 180.02562 * 11 10 9 13 13 C 1.38223 * 119.99922 * 359.97438 * 12 11 10 14 14 C 1.38247 * 119.99979 * 359.97438 * 13 12 11 15 Xx 1.80999 * 120.00098 * 179.97438 * 14 13 12 16 15 F 9.60127 * 158.07385 * 30.11229 * 5 1 2 17 16 F 1.61000 * 89.99714 * 315.00141 * 15 14 13 18 17 F 1.61001 * 90.00094 * 134.99842 * 15 14 13 19 18 F 1.60999 * 89.99758 * 44.99770 * 15 14 13 20 19 F 1.60999 * 90.00212 * 225.00125 * 15 14 13 21 20 C 1.38216 * 120.00262 * 359.81516 * 14 13 12 22 21 C 1.34780 * 119.99817 * 66.73828 * 8 7 6 23 22 O 1.21289 * 119.99884 * 184.45563 * 22 8 7 24 23 C 1.50701 * 120.00060 * 4.45515 * 22 8 7 25 24 C 1.53001 * 109.47129 * 174.47103 * 24 22 8 26 25 Si 1.86298 * 109.47342 * 179.97438 * 25 24 22 27 26 H 1.48492 * 109.47180 * 180.02562 * 26 25 24 28 27 H 1.48508 * 109.46992 * 300.00474 * 26 25 24 29 28 H 1.48506 * 109.46628 * 60.00169 * 26 25 24 30 29 C 1.38896 * 120.05651 * 359.97303 * 7 6 5 31 30 C 1.38406 * 119.76685 * 0.03896 * 30 7 6 32 31 N 1.40214 * 120.68693 * 180.02562 * 31 30 7 33 32 C 1.35091 * 118.99391 * 195.41814 * 32 31 30 34 33 O 1.21296 * 120.12653 * 181.68330 * 33 32 31 35 34 H 1.09003 * 109.46742 * 299.82885 * 1 2 3 36 35 H 1.08993 * 109.47172 * 59.83098 * 1 2 3 37 36 H 1.08998 * 109.47280 * 179.83145 * 1 2 3 38 37 H 1.09001 * 109.44275 * 240.09555 * 2 1 3 39 38 H 1.07999 * 120.01907 * 0.02562 * 5 4 3 40 39 H 1.07996 * 119.90893 * 179.97438 * 6 5 4 41 40 H 1.08997 * 109.47557 * 209.99539 * 9 8 7 42 41 H 1.09001 * 109.46690 * 330.00248 * 9 8 7 43 42 H 1.07999 * 119.99472 * 359.97438 * 11 10 9 44 43 H 1.07998 * 119.99789 * 179.97438 * 12 11 10 45 44 H 1.08000 * 119.99207 * 179.97438 * 13 12 11 46 45 H 1.07997 * 120.00207 * 180.02562 * 21 14 13 47 46 H 1.08997 * 109.47249 * 294.47407 * 24 22 8 48 47 H 1.09003 * 109.46931 * 54.47560 * 24 22 8 49 48 H 1.08997 * 109.47303 * 300.00271 * 25 24 22 50 49 H 1.09003 * 109.46841 * 60.00401 * 25 24 22 51 50 H 1.07995 * 120.11658 * 180.02562 * 30 7 6 52 51 H 0.97002 * 120.49863 * 15.39308 * 32 31 30 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0061 1.3483 0.0000 4 6 3.3241 1.5316 0.2844 5 6 4.0337 2.5645 -0.3018 6 6 5.3730 2.7387 -0.0040 7 6 6.0085 1.8792 0.8817 8 7 7.3656 2.0593 1.1799 9 6 8.3476 1.0578 0.7572 10 6 8.8621 1.4070 -0.6155 11 6 8.2193 0.9215 -1.7387 12 6 8.6917 1.2414 -2.9980 13 6 9.8065 2.0472 -3.1339 14 6 10.4488 2.5337 -2.0105 15 9 13.2072 4.5293 -2.3441 16 9 12.4963 2.5869 -3.3039 17 9 11.3216 4.5898 -1.0729 18 9 11.1606 4.4305 -3.3385 19 9 12.6574 2.7461 -1.0383 20 6 9.9740 2.2175 -0.7516 21 6 7.7675 3.1541 1.8556 22 8 8.9495 3.3508 2.0433 23 6 6.7483 4.1337 2.3778 24 6 7.4513 5.2020 3.2177 25 14 6.1915 6.4134 3.8626 26 1 6.8740 7.4506 4.6772 27 1 5.4964 7.0598 2.7205 28 1 5.2001 5.6958 4.7036 29 6 5.3001 0.8408 1.4726 30 6 3.9598 0.6663 1.1744 31 7 3.2261 -0.3751 1.7602 32 6 2.0323 -0.7153 1.2274 33 8 1.3664 -1.5925 1.7358 34 1 -0.3633 0.5112 0.8916 35 1 -0.3633 0.5164 -0.8884 36 1 -0.3634 -1.0276 -0.0030 37 1 1.8928 -0.5124 -0.8910 38 1 3.5421 3.2345 -0.9916 39 1 5.9261 3.5451 -0.4625 40 1 9.1779 1.0424 1.4633 41 1 7.8759 0.0756 0.7294 42 1 7.3485 0.2916 -1.6324 43 1 8.1896 0.8617 -3.8756 44 1 10.1756 2.2967 -4.1177 45 1 10.4756 2.5978 0.1260 46 1 6.2377 4.6081 1.5398 47 1 6.0209 3.6066 2.9952 48 1 7.9619 4.7275 4.0557 49 1 8.1788 5.7290 2.6002 50 1 5.7934 0.1719 2.1621 51 1 3.5708 -0.8443 2.5361 RHF calculation, no. of doubly occupied orbitals= 82 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. SCF OSCILLATION -- NSTAR INDEX INCREASED BY ONE SCF OSCILLATION -- NSTAR INDEX INCREASED BY ONE CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_275550_18164810_18164856_13179792.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Apr 22 2021 12:07:48 Heat of formation + Delta-G solvation = 337.327595 kcal Electronic energy + Delta-G solvation = -46358.487492 eV Core-core repulsion = 39780.135304 eV Total energy + Delta-G solvation = -6578.352188 eV No. of doubly occupied orbitals = 82 Molecular weight (most abundant/longest-lived isotopes) = 448.138 amu Computer time = 52.50 seconds Orbital eigenvalues (eV) -44.38561 -44.24636 -44.19054 -44.10057 -43.52780 -42.64739 -41.85224 -40.73329 -39.90593 -38.78594 -36.97571 -35.85597 -34.13975 -33.19899 -32.69239 -32.40000 -31.16597 -29.52852 -27.98863 -26.01736 -25.21452 -24.25486 -24.02876 -23.71792 -22.62716 -21.52057 -20.19470 -19.83083 -18.98357 -18.38642 -18.29170 -17.96281 -17.42372 -17.19103 -16.97248 -16.90342 -16.00477 -15.93680 -15.79813 -15.63406 -15.57946 -15.30487 -15.24375 -15.19215 -15.10347 -14.97049 -14.85868 -14.76549 -14.42663 -14.37461 -14.18924 -14.17225 -14.13973 -14.06399 -14.01479 -13.90034 -13.76939 -13.62306 -13.58746 -13.44902 -13.31336 -13.27826 -13.15586 -13.02435 -12.81129 -12.47304 -12.35879 -12.29619 -12.25559 -12.08978 -11.93824 -11.88748 -11.66317 -11.56814 -11.40400 -11.17805 -11.03864 -10.75590 -10.56994 -10.37364 -9.60781 -8.94005 -5.26065 -4.80521 -3.05081 -0.69347 -0.51334 -0.09552 0.13865 1.16896 1.41311 1.47437 1.57650 1.63741 1.64655 1.72359 2.05577 2.13928 2.25520 2.55610 2.69368 2.90877 2.96729 3.37547 3.48986 3.54888 3.59838 3.64958 3.73920 3.88115 3.93196 4.01730 4.08322 4.17393 4.20371 4.25297 4.29824 4.39858 4.54784 4.60921 4.64975 4.69833 4.75436 4.76120 4.77469 4.85702 4.90790 4.95103 4.97727 5.11213 5.14334 5.19012 5.36276 5.42946 5.45327 5.55988 5.70057 6.16567 6.29832 6.69868 7.01127 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.138 4.138 2 C 0.080 3.920 3 O -0.309 6.309 4 C 0.072 3.928 5 C -0.084 4.084 6 C -0.098 4.098 7 C 0.134 3.866 8 N -0.562 5.562 9 C 0.149 3.851 10 C -0.048 4.048 11 C -0.059 4.059 12 C -0.032 4.032 13 C -0.111 4.111 14 C 0.317 3.683 15 F -0.222 7.222 16 F -0.158 7.158 17 F -0.159 7.159 18 F -0.162 7.162 19 F -0.166 7.166 20 C -0.106 4.106 21 C 0.523 3.477 22 O -0.553 6.553 23 C -0.137 4.137 24 C -0.335 4.335 25 Si 1.000 3.000 26 H -0.291 1.291 27 H -0.265 1.265 28 H -0.266 1.266 29 C -0.105 4.105 30 C 0.099 3.901 31 N -0.656 5.656 32 C 0.489 3.511 33 O -0.542 6.542 34 H 0.058 0.942 35 H 0.098 0.902 36 H 0.090 0.910 37 H 0.131 0.869 38 H 0.159 0.841 39 H 0.151 0.849 40 H 0.098 0.902 41 H 0.155 0.845 42 H 0.212 0.788 43 H 0.227 0.773 44 H 0.182 0.818 45 H 0.157 0.843 46 H 0.120 0.880 47 H 0.118 0.882 48 H 0.085 0.915 49 H 0.080 0.920 50 H 0.159 0.841 51 H 0.423 0.577 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -14.279 -9.213 -2.794 17.222 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.196 4.196 2 C 0.021 3.979 3 O -0.224 6.224 4 C 0.026 3.974 5 C -0.104 4.104 6 C -0.119 4.119 7 C 0.043 3.957 8 N -0.290 5.290 9 C 0.029 3.971 10 C -0.050 4.050 11 C -0.076 4.076 12 C -0.048 4.048 13 C -0.128 4.128 14 C 0.313 3.687 15 F -0.222 7.222 16 F -0.157 7.157 17 F -0.158 7.158 18 F -0.161 7.161 19 F -0.165 7.165 20 C -0.125 4.125 21 C 0.314 3.686 22 O -0.430 6.430 23 C -0.176 4.176 24 C -0.427 4.427 25 Si 0.829 3.171 26 H -0.217 1.217 27 H -0.189 1.189 28 H -0.190 1.190 29 C -0.127 4.127 30 C 0.003 3.997 31 N -0.303 5.303 32 C 0.276 3.724 33 O -0.419 6.419 34 H 0.077 0.923 35 H 0.116 0.884 36 H 0.108 0.892 37 H 0.148 0.852 38 H 0.177 0.823 39 H 0.168 0.832 40 H 0.116 0.884 41 H 0.173 0.827 42 H 0.229 0.771 43 H 0.243 0.757 44 H 0.199 0.801 45 H 0.174 0.826 46 H 0.138 0.862 47 H 0.136 0.864 48 H 0.104 0.896 49 H 0.099 0.901 50 H 0.176 0.824 51 H 0.264 0.736 Dipole moment (debyes) X Y Z Total from point charges -14.906 -8.825 -2.214 17.463 hybrid contribution 2.502 0.676 0.574 2.654 sum -12.404 -8.149 -1.640 14.932 Atomic orbital electron populations 1.21754 0.88805 1.04509 1.04486 1.22741 0.98347 0.81171 0.95606 1.86321 1.22026 1.26869 1.87169 1.18973 0.83534 0.97546 0.97347 1.20562 0.92580 0.97540 0.99701 1.21303 0.93892 1.00114 0.96556 1.17171 0.82773 0.97510 0.98209 1.45490 1.05333 1.22519 1.55657 1.20869 0.93527 0.93221 0.89532 1.20655 0.89922 0.94666 0.99729 1.22297 0.99545 0.96135 0.89642 1.22141 0.88945 0.92012 1.01719 1.22342 0.94258 0.96800 0.99407 1.27865 0.59312 0.85165 0.96401 2.00000 1.99996 1.99938 1.22300 1.99919 1.97597 1.87713 1.30463 1.99923 1.92726 1.97367 1.25776 1.99918 1.88126 1.98544 1.29473 1.99921 1.98033 1.93562 1.24962 1.21880 0.96568 0.98265 0.95742 1.21290 0.89840 0.81352 0.76142 1.90771 1.19840 1.74493 1.57875 1.21613 0.97731 0.95908 1.02385 1.25014 1.07828 1.05266 1.04630 0.84554 0.76776 0.76989 0.78822 1.21730 1.18874 1.18995 1.20691 0.90244 1.00393 1.01400 1.17896 0.92461 0.91300 0.98076 1.43766 1.19554 1.34501 1.32485 1.21952 0.80602 0.82999 0.86813 1.90823 1.56148 1.32556 1.62329 0.92302 0.88362 0.89168 0.85183 0.82297 0.83174 0.88383 0.82722 0.77092 0.75656 0.80143 0.82552 0.86171 0.86398 0.89628 0.90102 0.82380 0.73647 Number of geometries 1 Number of calculations of the screened coulomb radii 6 The total number of SCF iterations 490. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 0.96 9.14 71.98 0.66 1.61 16 2 C 0.08 -0.60 3.68 29.84 0.11 -0.49 16 3 O -0.31 2.18 10.09 -94.46 -0.95 1.22 16 4 C 0.07 -0.78 6.44 22.59 0.15 -0.64 16 5 C -0.08 1.26 9.99 22.31 0.22 1.48 16 6 C -0.10 1.65 8.44 22.42 0.19 1.84 16 7 C 0.13 -2.19 4.43 38.12 0.17 -2.03 16 8 N -0.56 7.38 2.51 -635.15 -1.60 5.79 16 9 C 0.15 -2.33 5.44 85.63 0.47 -1.87 16 10 C -0.05 0.68 5.46 -19.86 -0.11 0.57 16 11 C -0.06 1.28 9.70 22.27 0.22 1.49 16 12 C -0.03 0.65 10.05 22.27 0.22 0.87 16 13 C -0.11 1.04 8.62 22.27 0.19 1.23 16 14 C 0.32 0.20 4.82 22.27 0.11 0.31 16 15 F -0.22 -6.45 16.67 44.97 0.75 -5.70 16 16 F -0.16 -2.66 15.32 44.97 0.69 -1.97 16 17 F -0.16 -3.19 15.30 44.97 0.69 -2.51 16 18 F -0.16 -2.72 15.31 44.97 0.69 -2.03 16 19 F -0.17 -3.26 15.32 44.97 0.69 -2.57 16 20 C -0.11 0.37 8.16 22.27 0.18 0.55 16 21 C 0.52 -2.94 7.53 87.66 0.66 -2.28 16 22 O -0.55 -1.96 14.85 -3.06 -0.05 -2.01 16 23 C -0.14 1.15 3.74 29.85 0.11 1.26 16 24 C -0.33 1.32 3.76 71.98 0.27 1.59 16 25 Si 1.00 -2.99 29.30 68.60 2.01 -0.98 16 26 H -0.29 -0.75 7.11 99.48 0.71 -0.04 16 27 H -0.26 0.56 7.11 99.48 0.71 1.27 16 28 H -0.27 0.59 7.11 99.48 0.71 1.29 16 29 C -0.11 1.74 9.54 22.47 0.21 1.96 16 30 C 0.10 -1.20 6.54 38.13 0.25 -0.95 16 31 N -0.66 5.69 5.47 -302.80 -1.66 4.04 16 32 C 0.49 -1.59 7.65 87.60 0.67 -0.92 16 33 O -0.54 -2.64 17.01 -3.08 -0.05 -2.69 16 34 H 0.06 -0.23 8.14 -2.39 -0.02 -0.25 16 35 H 0.10 -0.99 8.14 -2.39 -0.02 -1.01 16 36 H 0.09 -0.54 7.86 -2.39 -0.02 -0.56 16 37 H 0.13 -1.62 8.14 -2.39 -0.02 -1.64 16 38 H 0.16 -2.66 8.06 -2.91 -0.02 -2.68 16 39 H 0.15 -2.73 7.90 -2.91 -0.02 -2.75 16 40 H 0.10 -1.12 7.43 -2.39 -0.02 -1.13 16 41 H 0.16 -3.70 7.77 -2.39 -0.02 -3.72 16 42 H 0.21 -6.34 8.06 -2.91 -0.02 -6.37 16 43 H 0.23 -6.57 8.06 -2.91 -0.02 -6.60 16 44 H 0.18 -1.65 7.40 -2.91 -0.02 -1.67 16 45 H 0.16 0.47 6.75 -2.91 -0.02 0.46 16 46 H 0.12 -1.49 6.81 -2.39 -0.02 -1.50 16 47 H 0.12 -1.43 7.84 -2.39 -0.02 -1.45 16 48 H 0.08 -0.24 7.96 -2.39 -0.02 -0.26 16 49 H 0.08 -0.08 7.86 -2.39 -0.02 -0.10 16 50 H 0.16 -3.11 8.06 -2.91 -0.02 -3.13 16 51 H 0.42 -4.66 8.89 -92.71 -0.82 -5.49 16 Total: 0.00 -48.27 452.74 7.11 -41.15 By element: Atomic # 1 Polarization: -38.29 SS G_CDS: 0.95 Total: -37.34 kcal Atomic # 6 Polarization: 0.64 SS G_CDS: 4.95 Total: 5.59 kcal Atomic # 7 Polarization: 13.08 SS G_CDS: -3.25 Total: 9.83 kcal Atomic # 8 Polarization: -2.42 SS G_CDS: -1.05 Total: -3.47 kcal Atomic # 9 Polarization: -18.28 SS G_CDS: 3.50 Total: -14.78 kcal Atomic # 14 Polarization: -2.99 SS G_CDS: 2.01 Total: -0.98 kcal Total: -48.27 7.11 -41.15 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_275550_18164810_18164856_13179792.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 378.482 kcal (2) G-P(sol) polarization free energy of solvation -48.267 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 330.215 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 7.112 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.154 kcal (6) G-S(sol) free energy of system = (1) + (5) 337.328 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 52.50 seconds