Wall clock time and date at job start Thu Apr 22 2021 13:27:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46502 * 1 3 3 C 1.35209 * 125.75563 * 2 1 4 4 C 1.36476 * 106.04842 * 179.97438 * 3 2 1 5 5 C 1.48452 * 126.90611 * 180.02562 * 4 3 2 6 6 C 1.39332 * 120.08119 * 0.27261 * 5 4 3 7 7 C 1.38099 * 120.01848 * 179.97438 * 6 5 4 8 8 C 1.38173 * 120.19100 * 0.02562 * 7 6 5 9 9 C 1.38967 * 120.16815 * 359.97438 * 8 7 6 10 10 N 1.39942 * 120.00852 * 180.02562 * 9 8 7 11 11 C 1.46502 * 119.99455 * 246.73221 * 10 9 8 12 12 C 1.50707 * 109.47304 * 90.00046 * 11 10 9 13 13 C 1.38210 * 119.99939 * 270.27262 * 12 11 10 14 14 C 1.38254 * 120.00178 * 180.02562 * 13 12 11 15 15 C 1.38218 * 119.99853 * 359.97173 * 14 13 12 16 16 C 1.38255 * 119.99794 * 359.97438 * 15 14 13 17 Xx 1.81006 * 119.99700 * 179.97438 * 16 15 14 18 17 F 9.60023 * 138.83082 * 24.87870 * 7 1 2 19 18 F 1.61002 * 90.00139 * 314.99904 * 17 16 15 20 19 F 1.61002 * 89.99861 * 134.99904 * 17 16 15 21 20 F 1.61001 * 89.99855 * 45.00153 * 17 16 15 22 21 F 1.60997 * 90.00118 * 224.99675 * 17 16 15 23 22 C 1.38210 * 120.00252 * 359.81113 * 16 15 14 24 23 C 1.34773 * 120.00348 * 66.72680 * 10 9 8 25 24 O 1.21284 * 120.00249 * 184.45561 * 24 10 9 26 25 C 1.50696 * 119.99952 * 4.45881 * 24 10 9 27 26 C 1.53002 * 109.47338 * 174.46986 * 26 24 10 28 27 Si 1.86297 * 109.47348 * 179.97438 * 27 26 24 29 28 H 1.48506 * 109.47082 * 300.00329 * 28 27 26 30 29 H 1.48504 * 109.47150 * 59.99932 * 28 27 26 31 30 H 1.48501 * 109.47425 * 180.02562 * 28 27 26 32 31 C 1.38642 * 119.98045 * 359.73937 * 9 8 7 33 32 N 1.34504 * 106.19340 * 359.97438 * 4 3 2 34 33 N 1.28625 * 108.78031 * 359.77722 * 33 4 3 35 34 H 1.08998 * 109.47065 * 270.28595 * 1 2 3 36 35 H 1.08997 * 109.46843 * 30.28584 * 1 2 3 37 36 H 1.09000 * 109.46892 * 150.27974 * 1 2 3 38 37 H 1.08003 * 126.97450 * 359.94281 * 3 2 1 39 38 H 1.07994 * 119.99135 * 359.95693 * 6 5 4 40 39 H 1.07998 * 119.89993 * 179.97438 * 7 6 5 41 40 H 1.08005 * 119.91168 * 179.97438 * 8 7 6 42 41 H 1.09002 * 109.46947 * 209.99578 * 11 10 9 43 42 H 1.08991 * 109.47654 * 329.99924 * 11 10 9 44 43 H 1.08005 * 119.99711 * 359.97438 * 13 12 11 45 44 H 1.08002 * 120.00119 * 179.97438 * 14 13 12 46 45 H 1.07999 * 120.00222 * 179.97438 * 15 14 13 47 46 H 1.07998 * 120.00257 * 180.02562 * 23 16 15 48 47 H 1.08997 * 109.47165 * 294.47345 * 26 24 10 49 48 H 1.09003 * 109.47037 * 54.46986 * 26 24 10 50 49 H 1.08997 * 109.47285 * 300.00285 * 27 26 24 51 50 H 1.09003 * 109.47056 * 60.00012 * 27 26 24 52 51 H 1.07999 * 120.09920 * 180.02562 * 32 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2551 1.0972 0.0000 4 6 3.5399 0.6370 0.0006 5 6 4.7794 1.4539 0.0014 6 6 4.6991 2.8449 0.0073 7 6 5.8530 3.6036 0.0085 8 6 7.0897 2.9874 0.0034 9 6 7.1790 1.6006 -0.0026 10 7 8.4333 0.9801 -0.0072 11 6 8.8655 0.2109 -1.1768 12 6 9.5917 1.1194 -2.1352 13 6 8.8890 1.7905 -3.1181 14 6 9.5552 2.6235 -3.9977 15 6 10.9239 2.7856 -3.8937 16 6 11.6266 2.1151 -2.9098 17 9 15.0128 2.5167 -2.6527 18 9 13.5591 2.1649 -4.3699 19 9 13.2791 2.4889 -1.1784 20 9 13.2445 3.9176 -2.9509 21 9 13.5937 0.7362 -2.5973 22 6 10.9600 1.2858 -2.0277 23 6 9.2436 1.0900 1.0641 24 8 10.3617 0.6213 1.0295 25 6 8.7605 1.7954 2.3050 26 6 9.8106 1.6611 3.4096 27 14 9.2136 2.5338 4.9435 28 1 8.9939 3.9711 4.6414 29 1 7.9381 1.9226 5.3961 30 1 10.2331 2.4040 6.0154 31 6 6.0251 0.8321 0.0022 32 7 3.4575 -0.7055 0.0015 33 7 2.2166 -1.0442 0.0062 34 1 -0.3633 0.0051 1.0276 35 1 -0.3633 0.8874 -0.5183 36 1 -0.3633 -0.8925 -0.5095 37 1 1.9345 2.1286 -0.0009 38 1 3.7342 3.3299 0.0106 39 1 5.7885 4.6817 0.0127 40 1 7.9893 3.5852 0.0039 41 1 9.5332 -0.5898 -0.8585 42 1 7.9944 -0.2178 -1.6720 43 1 7.8195 1.6635 -3.1995 44 1 9.0061 3.1476 -4.7660 45 1 11.4444 3.4360 -4.5811 46 1 11.5089 0.7624 -1.2589 47 1 8.5989 2.8504 2.0836 48 1 7.8244 1.3464 2.6370 49 1 9.9722 0.6062 3.6310 50 1 10.7467 2.1102 3.0776 51 1 6.0923 -0.2458 -0.0020 RHF calculation, no. of doubly occupied orbitals= 81 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. SCF OSCILLATION -- NSTAR INDEX INCREASED BY ONE CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_275550_17776020_18164856_13179792.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Apr 22 2021 13:27:41 Heat of formation + Delta-G solvation = 503.484421 kcal Electronic energy + Delta-G solvation = -44749.327922 eV Core-core repulsion = 38400.929637 eV Total energy + Delta-G solvation = -6348.398285 eV No. of doubly occupied orbitals = 81 Molecular weight (most abundant/longest-lived isotopes) = 444.145 amu Computer time = 42.54 seconds Orbital eigenvalues (eV) -44.40053 -44.26065 -44.20608 -44.16716 -44.11659 -43.54868 -42.03076 -40.80419 -39.73456 -36.91932 -35.61792 -34.33614 -33.28859 -33.05053 -32.44482 -31.13039 -30.09694 -28.70523 -28.10218 -25.27316 -24.60544 -24.21329 -23.75012 -22.71680 -22.57368 -21.95511 -20.32694 -18.82232 -18.38089 -18.06323 -17.55323 -17.50350 -17.27492 -17.02739 -16.91348 -16.12036 -16.04300 -15.81214 -15.63707 -15.33933 -15.26181 -15.16147 -15.07660 -14.98738 -14.78608 -14.72394 -14.49023 -14.39642 -14.31027 -14.20113 -14.18789 -14.14885 -14.03237 -13.91635 -13.76908 -13.65806 -13.63868 -13.58872 -13.47292 -13.35512 -13.20292 -12.97322 -12.80300 -12.47361 -12.43050 -12.31145 -12.22021 -12.06986 -11.95289 -11.83206 -11.67609 -11.59577 -11.42155 -11.31984 -11.07487 -10.82427 -10.78831 -10.60543 -10.43098 -9.54759 -9.17418 -5.27661 -4.81914 -3.09111 -0.72414 -0.54269 -0.00849 0.35412 0.72106 1.40312 1.44395 1.55720 1.58885 1.63943 1.68232 1.71629 2.03875 2.17961 2.65888 2.90453 2.93879 3.22884 3.34069 3.45718 3.54422 3.61329 3.73164 3.84803 3.93479 4.00963 4.09402 4.15464 4.17284 4.20636 4.27708 4.34873 4.36203 4.36966 4.48992 4.56271 4.61375 4.64765 4.68658 4.71674 4.74357 4.86584 4.87853 4.89745 4.91813 5.09976 5.14631 5.22197 5.35175 5.50897 5.59344 5.63520 5.66192 5.88141 6.30791 6.99417 7.47916 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.067 3.933 2 N -0.287 5.287 3 C -0.017 4.017 4 C -0.006 4.006 5 C 0.000 4.000 6 C -0.089 4.089 7 C -0.091 4.091 8 C -0.113 4.113 9 C 0.123 3.877 10 N -0.564 5.564 11 C 0.149 3.851 12 C -0.047 4.047 13 C -0.060 4.060 14 C -0.028 4.028 15 C -0.108 4.108 16 C 0.320 3.680 17 F -0.221 7.221 18 F -0.157 7.157 19 F -0.161 7.161 20 F -0.160 7.160 21 F -0.168 7.168 22 C -0.107 4.107 23 C 0.519 3.481 24 O -0.557 6.557 25 C -0.133 4.133 26 C -0.340 4.340 27 Si 1.007 2.993 28 H -0.259 1.259 29 H -0.267 1.267 30 H -0.289 1.289 31 C -0.097 4.097 32 N -0.297 5.297 33 N -0.128 5.128 34 H 0.106 0.894 35 H 0.135 0.865 36 H 0.102 0.898 37 H 0.240 0.760 38 H 0.156 0.844 39 H 0.160 0.840 40 H 0.136 0.864 41 H 0.094 0.906 42 H 0.144 0.856 43 H 0.207 0.793 44 H 0.230 0.770 45 H 0.186 0.814 46 H 0.156 0.844 47 H 0.122 0.878 48 H 0.112 0.888 49 H 0.081 0.919 50 H 0.080 0.920 51 H 0.120 0.880 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -25.218 6.759 -3.046 26.285 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.072 4.072 2 N -0.079 5.079 3 C -0.170 4.170 4 C -0.144 4.144 5 C -0.003 4.003 6 C -0.108 4.108 7 C -0.109 4.109 8 C -0.133 4.133 9 C 0.033 3.967 10 N -0.292 5.292 11 C 0.028 3.972 12 C -0.048 4.048 13 C -0.078 4.078 14 C -0.045 4.045 15 C -0.126 4.126 16 C 0.315 3.685 17 F -0.221 7.221 18 F -0.156 7.156 19 F -0.159 7.159 20 F -0.158 7.158 21 F -0.167 7.167 22 C -0.125 4.125 23 C 0.311 3.689 24 O -0.435 6.435 25 C -0.173 4.173 26 C -0.432 4.432 27 Si 0.834 3.166 28 H -0.183 1.183 29 H -0.191 1.191 30 H -0.214 1.214 31 C -0.118 4.118 32 N -0.163 5.163 33 N -0.107 5.107 34 H 0.124 0.876 35 H 0.154 0.846 36 H 0.120 0.880 37 H 0.256 0.744 38 H 0.174 0.826 39 H 0.177 0.823 40 H 0.154 0.846 41 H 0.112 0.888 42 H 0.161 0.839 43 H 0.224 0.776 44 H 0.247 0.753 45 H 0.203 0.797 46 H 0.173 0.827 47 H 0.140 0.860 48 H 0.131 0.869 49 H 0.100 0.900 50 H 0.099 0.901 51 H 0.138 0.862 Dipole moment (debyes) X Y Z Total from point charges -24.995 5.280 -2.276 25.648 hybrid contribution 2.425 0.271 0.115 2.443 sum -22.570 5.552 -2.161 23.343 Atomic orbital electron populations 1.22768 0.69809 1.07923 1.06685 1.47610 1.11110 1.04390 1.44806 1.24279 0.89507 0.96272 1.06911 1.20795 0.94306 0.90213 1.09115 1.17545 0.88309 0.92417 1.02001 1.21472 1.00827 0.90874 0.97630 1.21242 0.90379 1.01542 0.97744 1.21547 0.99664 0.92417 0.99651 1.17393 0.82970 0.91465 1.04861 1.45513 1.15767 1.52640 1.15314 1.20763 1.00952 0.91448 0.84022 1.20574 0.85515 1.00002 0.98755 1.22261 1.03981 0.91225 0.90327 1.22141 0.85075 0.97110 1.00166 1.22362 0.92731 1.00472 0.96990 1.27833 0.31782 1.05968 1.02896 2.00000 1.99620 1.69040 1.53450 1.99918 1.95600 1.88137 1.31913 1.99923 1.92310 1.84812 1.38882 1.99918 1.93752 1.51730 1.70423 1.99922 1.94800 1.47196 1.74787 1.21817 0.92981 0.98174 0.99529 1.21362 0.84101 0.78702 0.84783 1.90746 1.20795 1.48815 1.83100 1.21572 1.00772 1.03364 0.91545 1.25101 1.02741 1.08128 1.07214 0.84469 0.78325 0.78669 0.75108 1.18327 1.19088 1.21436 1.21153 0.90743 1.00181 0.99702 1.75229 1.10061 1.13450 1.17561 1.78263 0.96726 1.13795 1.21868 0.87588 0.84627 0.87959 0.74363 0.82596 0.82264 0.84645 0.88782 0.83858 0.77574 0.75328 0.79740 0.82715 0.86042 0.86947 0.90028 0.90107 0.86178 Number of geometries 1 Number of calculations of the screened coulomb radii 3 The total number of SCF iterations 388. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 -1.01 11.38 127.77 1.45 0.44 16 2 N -0.29 1.62 3.73 -368.37 -1.37 0.24 16 3 C -0.02 0.16 11.01 83.76 0.92 1.08 16 4 C -0.01 0.02 6.99 41.05 0.29 0.31 16 5 C 0.00 0.00 5.87 -20.05 -0.12 -0.12 16 6 C -0.09 1.29 9.58 22.50 0.22 1.51 16 7 C -0.09 1.44 10.03 22.22 0.22 1.66 16 8 C -0.11 1.49 8.44 22.43 0.19 1.68 16 9 C 0.12 -1.21 4.42 38.12 0.17 -1.04 16 10 N -0.56 3.51 2.51 -635.42 -1.59 1.91 16 11 C 0.15 -1.25 5.44 85.64 0.47 -0.79 16 12 C -0.05 0.42 5.46 -19.86 -0.11 0.31 16 13 C -0.06 1.05 9.70 22.27 0.22 1.26 16 14 C -0.03 0.50 10.05 22.27 0.22 0.73 16 15 C -0.11 0.78 8.62 22.27 0.19 0.97 16 16 C 0.32 1.05 4.82 22.27 0.11 1.16 16 17 F -0.22 -6.74 16.66 44.97 0.75 -5.99 16 18 F -0.16 -2.89 15.31 44.97 0.69 -2.20 16 19 F -0.16 -3.58 15.30 44.97 0.69 -2.90 16 20 F -0.16 -2.90 15.31 44.97 0.69 -2.21 16 21 F -0.17 -3.71 15.32 44.97 0.69 -3.02 16 22 C -0.11 -0.04 8.16 22.27 0.18 0.14 16 23 C 0.52 0.08 7.53 87.66 0.66 0.74 16 24 O -0.56 -4.91 14.85 -3.04 -0.05 -4.95 16 25 C -0.13 0.51 3.74 29.85 0.11 0.62 16 26 C -0.34 0.16 3.76 71.98 0.27 0.43 16 27 Si 1.01 -1.23 29.30 68.60 2.01 0.78 16 28 H -0.26 0.34 7.11 99.48 0.71 1.04 16 29 H -0.27 0.08 7.11 99.48 0.71 0.79 16 30 H -0.29 -1.09 7.11 99.48 0.71 -0.39 16 31 C -0.10 0.71 9.30 22.60 0.21 0.92 16 32 N -0.30 -1.35 12.16 -49.31 -0.60 -1.95 16 33 N -0.13 -0.48 13.14 37.02 0.49 0.00 16 34 H 0.11 -1.79 8.14 -2.39 -0.02 -1.81 16 35 H 0.14 -2.95 8.14 -2.39 -0.02 -2.97 16 36 H 0.10 -1.45 8.14 -2.39 -0.02 -1.47 16 37 H 0.24 -4.83 7.40 -2.91 -0.02 -4.85 16 38 H 0.16 -3.14 7.11 -2.91 -0.02 -3.16 16 39 H 0.16 -3.20 8.06 -2.91 -0.02 -3.22 16 40 H 0.14 -1.90 7.91 -2.91 -0.02 -1.92 16 41 H 0.09 -0.39 7.43 -2.39 -0.02 -0.41 16 42 H 0.14 -2.08 7.78 -2.39 -0.02 -2.10 16 43 H 0.21 -5.06 8.06 -2.91 -0.02 -5.09 16 44 H 0.23 -6.18 8.06 -2.91 -0.02 -6.21 16 45 H 0.19 -1.43 7.40 -2.91 -0.02 -1.46 16 46 H 0.16 1.11 6.75 -2.91 -0.02 1.09 16 47 H 0.12 -1.04 6.81 -2.39 -0.02 -1.05 16 48 H 0.11 -0.74 7.84 -2.39 -0.02 -0.76 16 49 H 0.08 0.10 7.96 -2.39 -0.02 0.08 16 50 H 0.08 0.17 7.86 -2.39 -0.02 0.15 16 51 H 0.12 -0.44 7.90 -2.91 -0.02 -0.46 16 Total: 0.00 -52.42 457.95 10.01 -42.40 By element: Atomic # 1 Polarization: -35.91 SS G_CDS: 1.75 Total: -34.15 kcal Atomic # 6 Polarization: 6.15 SS G_CDS: 5.87 Total: 12.02 kcal Atomic # 7 Polarization: 3.29 SS G_CDS: -3.08 Total: 0.21 kcal Atomic # 8 Polarization: -4.91 SS G_CDS: -0.05 Total: -4.95 kcal Atomic # 9 Polarization: -19.82 SS G_CDS: 3.50 Total: -16.31 kcal Atomic # 14 Polarization: -1.23 SS G_CDS: 2.01 Total: 0.78 kcal Total: -52.42 10.01 -42.40 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_275550_17776020_18164856_13179792.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 545.888 kcal (2) G-P(sol) polarization free energy of solvation -52.416 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 493.472 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 10.012 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.403 kcal (6) G-S(sol) free energy of system = (1) + (5) 503.484 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 42.54 seconds