Wall clock time and date at job start Fri Apr 23 2021 06:03:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.21294 * 1 3 3 C 1.50699 * 120.00003 * 2 1 4 4 C 1.52999 * 109.47427 * 1.17414 * 3 2 1 5 5 Si 1.86299 * 109.47409 * 180.02562 * 4 3 2 6 6 H 1.48496 * 109.46845 * 300.00018 * 5 4 3 7 7 H 1.48496 * 109.47046 * 60.00109 * 5 4 3 8 8 H 1.48502 * 109.47028 * 180.02562 * 5 4 3 9 9 N 1.34774 * 119.99956 * 179.72257 * 2 1 3 10 10 C 1.46500 * 120.00223 * 185.13399 * 9 2 1 11 11 C 1.50698 * 109.47181 * 264.56612 * 10 9 2 12 12 C 1.38213 * 119.99701 * 274.37897 * 11 10 9 13 13 C 1.38257 * 119.99765 * 180.02562 * 12 11 10 14 Xx 1.81005 * 119.99666 * 179.97438 * 13 12 11 15 14 F 8.26154 * 118.68604 * 219.51145 * 2 1 3 16 15 F 1.60995 * 89.99840 * 135.00197 * 14 13 12 17 16 F 1.61004 * 89.99882 * 314.99746 * 14 13 12 18 17 F 1.61007 * 89.99749 * 225.00275 * 14 13 12 19 18 F 1.60994 * 89.99973 * 44.99959 * 14 13 12 20 19 C 1.38214 * 120.00147 * 359.95485 * 13 12 11 21 20 C 1.38255 * 119.99930 * 0.02562 * 20 13 12 22 21 C 1.38212 * 119.99983 * 359.77174 * 21 20 13 23 22 C 1.40073 * 119.99825 * 5.13204 * 9 2 1 24 23 C 1.38575 * 119.99139 * 90.28025 * 23 9 2 25 24 C 1.39263 * 119.54986 * 179.97438 * 24 23 9 26 25 C 1.39802 * 120.12860 * 359.97438 * 25 24 23 27 26 C 1.37756 * 119.96817 * 0.06788 * 26 25 24 28 27 C 1.38550 * 120.01725 * 359.67734 * 27 26 25 29 28 F 1.35108 * 119.83450 * 180.02562 * 28 27 26 30 29 C 1.50585 * 119.17490 * 180.13165 * 26 25 24 31 30 C 1.52693 * 109.91299 * 325.94362 * 30 26 25 32 31 N 1.46032 * 111.04712 * 51.17862 * 31 30 26 33 32 C 1.34809 * 121.17872 * 322.27987 * 32 31 30 34 33 O 1.21572 * 120.43718 * 182.75027 * 33 32 31 35 34 H 1.08999 * 109.47493 * 121.17860 * 3 2 1 36 35 H 1.09005 * 109.46938 * 241.17595 * 3 2 1 37 36 H 1.08999 * 109.47148 * 300.00657 * 4 3 2 38 37 H 1.09005 * 109.46914 * 60.00166 * 4 3 2 39 38 H 1.08999 * 109.46965 * 24.56432 * 10 9 2 40 39 H 1.09002 * 109.46999 * 144.55818 * 10 9 2 41 40 H 1.07998 * 120.00141 * 359.97438 * 12 11 10 42 41 H 1.08003 * 120.00017 * 179.97438 * 20 13 12 43 42 H 1.07998 * 119.99983 * 179.97438 * 21 20 13 44 43 H 1.07996 * 120.00049 * 180.02562 * 22 21 20 45 44 H 1.08000 * 120.22535 * 359.93181 * 24 23 9 46 45 H 1.07996 * 119.98950 * 179.97438 * 27 26 25 47 46 H 1.08996 * 109.40166 * 86.08053 * 30 26 25 48 47 H 1.08996 * 109.39480 * 205.81201 * 30 26 25 49 48 H 1.09002 * 109.15981 * 171.57733 * 31 30 26 50 49 H 1.08993 * 109.16770 * 290.76917 * 31 30 26 51 50 H 0.96994 * 119.41412 * 142.25768 * 32 31 30 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.2129 0.0000 0.0000 3 6 1.9664 1.3051 0.0000 4 6 0.9725 2.4679 0.0296 5 14 1.9040 4.0813 0.0288 6 1 2.7795 4.1479 1.2263 7 1 2.7356 4.1721 -1.1981 8 1 0.9393 5.2099 0.0581 9 7 1.8868 -1.1672 0.0057 10 6 3.3474 -1.1692 0.1192 11 6 3.9581 -1.2479 -1.2563 12 6 4.1478 -2.4773 -1.8588 13 6 4.7085 -2.5495 -3.1205 14 9 5.1786 -5.5915 -4.6111 15 9 4.3633 -3.5763 -5.2872 16 9 5.5520 -4.7426 -2.5313 17 9 6.4374 -3.7108 -4.3576 18 9 3.4779 -4.6081 -3.4608 19 6 5.0785 -1.3924 -3.7796 20 6 4.8883 -0.1626 -3.1770 21 6 4.3239 -0.0902 -1.9175 22 6 1.1906 -2.3783 -0.0970 23 6 0.9444 -2.9323 -1.3431 24 6 0.2518 -4.1370 -1.4344 25 6 -0.1906 -4.7817 -0.2755 26 6 0.0574 -4.2241 0.9595 27 6 0.7508 -3.0282 1.0534 28 9 0.9925 -2.4848 2.2665 29 6 -0.9348 -6.0850 -0.3991 30 6 -1.7844 -6.0804 -1.6678 31 7 -0.9869 -5.7037 -2.8317 32 6 -0.0304 -4.7576 -2.7457 33 8 0.5916 -4.4190 -3.7339 34 1 2.6089 1.3538 0.8792 35 1 2.5772 1.3720 -0.9004 36 1 0.3301 2.4192 -0.8496 37 1 0.3618 2.4010 0.9299 38 1 3.6749 -0.2529 0.6102 39 1 3.6649 -2.0301 0.7076 40 1 3.8588 -3.3814 -1.3437 41 1 5.5169 -1.4488 -4.7650 42 1 5.1778 0.7415 -3.6919 43 1 4.1750 0.8704 -1.4470 44 1 1.2866 -2.4328 -2.2374 45 1 -0.2846 -4.7216 1.8549 46 1 -0.2205 -6.9069 -0.4447 47 1 -1.5810 -6.2165 0.4688 48 1 -2.1982 -7.0766 -1.8249 49 1 -2.6017 -5.3692 -1.5487 50 1 -1.1480 -6.1422 -3.6817 RHF calculation, no. of doubly occupied orbitals= 82 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. SCF OSCILLATION -- NSTAR INDEX INCREASED BY ONE SCF OSCILLATION -- NSTAR INDEX INCREASED BY ONE CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_275550_17776144_18164856_13179792.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Fri Apr 23 2021 06:03:50 Heat of formation + Delta-G solvation = 323.631437 kcal Electronic energy + Delta-G solvation = -48665.773763 eV Core-core repulsion = 41936.055881 eV Total energy + Delta-G solvation = -6729.717882 eV No. of doubly occupied orbitals = 82 Molecular weight (most abundant/longest-lived isotopes) = 450.129 amu Computer time = 46.26 seconds Orbital eigenvalues (eV) -50.16555 -44.40780 -44.23803 -44.14736 -44.06327 -43.49054 -42.24320 -41.50951 -40.70861 -39.21338 -37.63454 -36.64872 -34.13411 -33.40083 -32.66008 -32.37774 -31.80983 -29.95779 -27.75752 -26.17176 -25.23381 -24.39860 -23.95712 -23.14194 -22.99705 -21.33645 -20.12032 -18.89769 -18.85516 -18.62901 -18.12487 -17.89914 -17.63172 -17.26027 -16.94442 -16.80467 -16.58743 -16.30452 -15.98124 -15.70400 -15.42137 -15.36380 -15.29681 -15.17413 -15.12269 -14.96218 -14.94553 -14.78038 -14.71228 -14.51368 -14.41430 -14.22235 -14.14050 -14.12706 -14.04306 -14.01049 -13.88900 -13.77935 -13.60227 -13.58792 -13.54310 -13.48472 -13.06814 -13.03303 -12.85351 -12.55032 -12.35746 -12.26738 -12.23251 -11.95512 -11.90687 -11.49533 -11.48163 -11.39795 -11.28293 -10.93725 -10.81602 -10.73743 -10.34771 -10.28842 -10.23074 -9.82263 -5.23596 -4.78711 -3.08988 -0.75212 -0.64696 -0.54764 -0.17947 1.40527 1.42961 1.46155 1.66207 1.75733 1.81652 1.97978 2.15364 2.29803 2.37628 2.62843 2.81151 2.88933 3.26418 3.34373 3.35179 3.39699 3.50044 3.54256 3.63607 3.75530 3.84409 3.94828 4.03061 4.09084 4.13989 4.20477 4.24325 4.28365 4.36412 4.45902 4.51809 4.54271 4.62000 4.70405 4.72443 4.74099 4.78366 4.85066 4.93994 5.01853 5.03938 5.09030 5.14621 5.46595 5.60446 5.76369 6.02636 6.03923 6.99517 7.02762 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.561 6.561 2 C 0.517 3.483 3 C -0.139 4.139 4 C -0.344 4.344 5 Si 1.009 2.991 6 H -0.259 1.259 7 H -0.245 1.245 8 H -0.304 1.304 9 N -0.571 5.571 10 C 0.139 3.861 11 C -0.053 4.053 12 C -0.112 4.112 13 C 0.322 3.678 14 F -0.229 7.229 15 F -0.170 7.170 16 F -0.177 7.177 17 F -0.166 7.166 18 F -0.121 7.121 19 C -0.115 4.115 20 C -0.029 4.029 21 C -0.073 4.073 22 C 0.082 3.918 23 C -0.031 4.031 24 C -0.161 4.161 25 C -0.010 4.010 26 C -0.148 4.148 27 C 0.133 3.867 28 F -0.126 7.126 29 C -0.105 4.105 30 C 0.105 3.895 31 N -0.721 5.721 32 C 0.551 3.449 33 O -0.569 6.569 34 H 0.146 0.854 35 H 0.136 0.864 36 H 0.078 0.922 37 H 0.078 0.922 38 H 0.175 0.825 39 H 0.114 0.886 40 H 0.159 0.841 41 H 0.180 0.820 42 H 0.230 0.770 43 H 0.222 0.778 44 H 0.130 0.870 45 H 0.178 0.822 46 H 0.101 0.899 47 H 0.137 0.863 48 H 0.124 0.876 49 H 0.077 0.923 50 H 0.411 0.589 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.783 10.477 10.182 14.631 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.436 6.436 2 C 0.309 3.691 3 C -0.177 4.177 4 C -0.435 4.435 5 Si 0.836 3.164 6 H -0.183 1.183 7 H -0.169 1.169 8 H -0.230 1.230 9 N -0.302 5.302 10 C 0.019 3.981 11 C -0.054 4.054 12 C -0.130 4.130 13 C 0.318 3.682 14 F -0.229 7.229 15 F -0.168 7.168 16 F -0.176 7.176 17 F -0.164 7.164 18 F -0.119 7.119 19 C -0.132 4.132 20 C -0.045 4.045 21 C -0.090 4.090 22 C -0.009 4.009 23 C -0.052 4.052 24 C -0.165 4.165 25 C -0.011 4.011 26 C -0.167 4.167 27 C 0.112 3.888 28 F -0.104 7.104 29 C -0.142 4.142 30 C -0.018 4.018 31 N -0.373 5.373 32 C 0.339 3.661 33 O -0.448 6.448 34 H 0.164 0.836 35 H 0.153 0.847 36 H 0.097 0.903 37 H 0.097 0.903 38 H 0.193 0.807 39 H 0.132 0.868 40 H 0.177 0.823 41 H 0.197 0.803 42 H 0.246 0.754 43 H 0.238 0.762 44 H 0.148 0.852 45 H 0.195 0.805 46 H 0.119 0.881 47 H 0.155 0.845 48 H 0.143 0.857 49 H 0.095 0.905 50 H 0.247 0.753 Dipole moment (debyes) X Y Z Total from point charges -0.644 11.610 9.961 15.311 hybrid contribution -0.384 -2.646 -1.310 2.977 sum -1.028 8.964 8.651 12.500 Atomic orbital electron populations 1.90764 1.16507 1.87408 1.48958 1.21936 0.87990 0.85756 0.73417 1.21939 0.99570 0.87885 1.08346 1.25155 1.04704 1.07356 1.06291 0.84438 0.77564 0.73672 0.80693 1.18314 1.16857 1.23040 1.45678 1.07199 1.02830 1.74458 1.21302 0.76115 1.10218 0.90434 1.20721 0.99071 0.87194 0.98424 1.21792 0.99065 1.01481 0.90646 1.27791 1.09085 0.44288 0.87043 2.00000 1.86421 1.87714 1.48782 1.99919 1.98498 1.68265 1.50142 1.99918 1.97506 1.94411 1.25758 1.99918 1.73105 1.68314 1.75085 1.99923 1.64434 1.95431 1.52148 1.22383 1.00787 0.85331 1.04738 1.22200 0.95063 0.92719 0.94548 1.22504 0.92232 1.00410 0.93821 1.17275 1.02545 0.90151 0.90966 1.21109 0.93668 0.93517 0.96863 1.19776 1.05063 0.98065 0.93595 1.20209 0.93745 0.96464 0.90705 1.21169 1.01046 0.94860 0.99628 1.18275 0.97546 0.93184 0.79797 1.91538 1.92012 1.85369 1.41456 1.21090 0.99899 0.92740 1.00487 1.21653 0.92900 1.03925 0.83332 1.45810 1.36777 1.39552 1.15143 1.18489 0.79785 0.79596 0.88222 1.90891 1.51187 1.63392 1.39377 0.83601 0.84652 0.90272 0.90342 0.80738 0.86802 0.82340 0.80291 0.75366 0.76191 0.85169 0.80468 0.88123 0.84484 0.85745 0.90490 0.75258 Number of geometries 1 Number of calculations of the screened coulomb radii 6 The total number of SCF iterations 439. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -3.92 15.96 -3.07 -0.05 -3.96 16 2 C 0.52 -2.32 7.63 87.66 0.67 -1.65 16 3 C -0.14 2.10 3.72 29.85 0.11 2.21 16 4 C -0.34 3.34 3.74 71.98 0.27 3.61 16 5 Si 1.01 -10.86 29.30 68.60 2.01 -8.85 16 6 H -0.26 2.72 7.11 99.48 0.71 3.43 16 7 H -0.25 3.14 7.11 99.48 0.71 3.85 16 8 H -0.30 0.85 7.11 99.48 0.71 1.56 16 9 N -0.57 3.82 2.32 -635.08 -1.47 2.34 16 10 C 0.14 -2.24 5.40 85.63 0.46 -1.77 16 11 C -0.05 0.75 5.44 -19.87 -0.11 0.64 16 12 C -0.11 0.44 7.58 22.27 0.17 0.61 16 13 C 0.32 0.66 4.82 22.27 0.11 0.77 16 14 F -0.23 -7.10 16.66 44.97 0.75 -6.35 16 15 F -0.17 -3.59 15.31 44.97 0.69 -2.90 16 16 F -0.18 -3.40 15.31 44.97 0.69 -2.71 16 17 F -0.17 -3.07 15.31 44.97 0.69 -2.39 16 18 F -0.12 -2.65 14.91 44.97 0.67 -1.97 16 19 C -0.11 0.83 8.62 22.27 0.19 1.02 16 20 C -0.03 0.55 10.05 22.27 0.22 0.77 16 21 C -0.07 1.55 9.05 22.27 0.20 1.75 16 22 C 0.08 0.00 4.47 38.15 0.17 0.17 16 23 C -0.03 -0.13 8.90 22.60 0.20 0.07 16 24 C -0.16 -0.87 5.78 -20.13 -0.12 -0.98 16 25 C -0.01 0.01 5.68 -19.64 -0.11 -0.10 16 26 C -0.15 0.43 9.69 22.23 0.22 0.65 16 27 C 0.13 -0.02 7.31 22.59 0.17 0.15 16 28 F -0.13 -0.03 17.06 44.97 0.77 0.73 16 29 C -0.11 0.79 6.04 29.71 0.18 0.97 16 30 C 0.10 -0.68 7.03 86.37 0.61 -0.07 16 31 N -0.72 -1.58 5.58 -467.49 -2.61 -4.19 16 32 C 0.55 5.55 7.78 86.77 0.68 6.23 16 33 O -0.57 -11.00 17.05 -3.94 -0.07 -11.07 16 34 H 0.15 -3.36 7.00 -2.39 -0.02 -3.38 16 35 H 0.14 -3.15 5.12 -2.38 -0.01 -3.16 16 36 H 0.08 -0.52 7.91 -2.39 -0.02 -0.54 16 37 H 0.08 -0.50 7.93 -2.38 -0.02 -0.52 16 38 H 0.18 -4.57 6.14 -2.39 -0.01 -4.59 16 39 H 0.11 -1.84 8.06 -2.39 -0.02 -1.86 16 40 H 0.16 -0.09 7.40 -2.91 -0.02 -0.11 16 41 H 0.18 -1.15 7.40 -2.91 -0.02 -1.17 16 42 H 0.23 -6.41 8.06 -2.91 -0.02 -6.43 16 43 H 0.22 -6.94 6.06 -2.91 -0.02 -6.96 16 44 H 0.13 0.83 7.78 -2.91 -0.02 0.80 16 45 H 0.18 -1.56 8.06 -2.91 -0.02 -1.58 16 46 H 0.10 -0.76 8.14 -2.39 -0.02 -0.78 16 47 H 0.14 -1.88 8.07 -2.39 -0.02 -1.90 16 48 H 0.12 -1.50 8.14 -2.39 -0.02 -1.52 16 49 H 0.08 -0.54 8.14 -2.39 -0.02 -0.56 16 50 H 0.41 0.40 8.92 -92.71 -0.83 -0.43 16 Total: 0.00 -59.43 443.18 7.33 -52.10 By element: Atomic # 1 Polarization: -26.81 SS G_CDS: 0.99 Total: -25.82 kcal Atomic # 6 Polarization: 10.75 SS G_CDS: 4.28 Total: 15.03 kcal Atomic # 7 Polarization: 2.24 SS G_CDS: -4.08 Total: -1.84 kcal Atomic # 8 Polarization: -14.91 SS G_CDS: -0.12 Total: -15.03 kcal Atomic # 9 Polarization: -19.84 SS G_CDS: 4.25 Total: -15.59 kcal Atomic # 14 Polarization: -10.86 SS G_CDS: 2.01 Total: -8.85 kcal Total: -59.43 7.33 -52.10 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_275550_17776144_18164856_13179792.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 375.733 kcal (2) G-P(sol) polarization free energy of solvation -59.435 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 316.298 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 7.333 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -52.101 kcal (6) G-S(sol) free energy of system = (1) + (5) 323.631 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 46.27 seconds