Wall clock time and date at job start Mon Mar 23 2020 11:52:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46501 * 1 3 3 C 1.46505 * 119.99974 * 2 1 4 4 C 1.36083 * 120.00152 * 179.97438 * 2 1 3 5 5 C 1.36597 * 120.00224 * 6.80430 * 4 2 1 6 6 C 1.41154 * 119.99729 * 324.28257 * 5 4 2 7 7 O 1.21476 * 120.00111 * 185.83501 * 6 5 4 8 8 C 1.48389 * 120.00157 * 144.27983 * 5 4 2 9 9 N 1.31641 * 125.95229 * 226.14227 * 8 5 4 10 10 N 1.40075 * 108.18380 * 180.23868 * 9 8 5 11 11 C 1.35894 * 108.01974 * 359.73831 * 10 9 8 12 12 Cl 1.73601 * 126.09008 * 180.02562 * 11 10 9 13 13 C 1.35240 * 107.82760 * 0.02562 * 11 10 9 14 14 C 1.50707 * 126.06401 * 179.97438 * 13 11 10 15 15 O 1.42900 * 109.46930 * 50.70289 * 14 13 11 16 16 Si 1.86291 * 109.47038 * 290.70316 * 14 13 11 17 17 H 1.48496 * 109.47284 * 68.18207 * 16 14 13 18 18 H 1.48497 * 109.47376 * 188.18437 * 16 14 13 19 19 H 1.48503 * 109.47134 * 308.18241 * 16 14 13 20 20 C 1.40086 * 125.99083 * 179.71887 * 10 9 8 21 21 C 1.38868 * 120.06706 * 144.75003 * 20 10 9 22 22 C 1.38123 * 119.92456 * 179.68000 * 21 20 10 23 23 C 1.38282 * 120.06890 * 0.61168 * 22 21 20 24 24 C 1.38282 * 120.14054 * 359.68374 * 23 22 21 25 25 C 1.38116 * 120.06929 * 359.97438 * 24 23 22 26 26 H 1.08998 * 109.46755 * 271.66594 * 1 2 3 27 27 H 1.08995 * 109.46896 * 31.66804 * 1 2 3 28 28 H 1.08992 * 109.46865 * 151.66770 * 1 2 3 29 29 H 1.09001 * 109.46615 * 269.99951 * 3 2 1 30 30 H 1.08999 * 109.46958 * 29.99334 * 3 2 1 31 31 H 1.08994 * 109.47415 * 149.99838 * 3 2 1 32 32 H 1.08003 * 120.00147 * 186.79714 * 4 2 1 33 33 H 1.08009 * 119.99828 * 5.83825 * 6 5 4 34 34 H 1.08994 * 109.47050 * 170.70100 * 14 13 11 35 35 H 1.07988 * 120.03957 * 359.97438 * 21 20 10 36 36 H 1.08004 * 119.96219 * 180.31933 * 22 21 20 37 37 H 1.08001 * 119.92796 * 179.69990 * 23 22 21 38 38 H 1.07999 * 119.96612 * 180.02562 * 24 23 22 39 39 H 1.08001 * 120.03334 * 180.02562 * 25 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1975 1.2688 0.0000 4 6 2.1455 -1.1785 0.0005 5 6 1.4698 -2.3574 -0.1391 6 6 0.1909 -2.5105 0.4384 7 8 -0.3648 -3.5902 0.4061 8 6 2.0801 -3.4771 -0.8979 9 7 1.4778 -4.2127 -1.8084 10 7 2.3939 -5.1616 -2.2799 11 6 3.5706 -4.9701 -1.6276 12 17 5.0260 -5.8893 -1.8528 13 6 3.4061 -3.9359 -0.7718 14 6 4.4538 -3.3771 0.1563 15 8 5.6500 -3.1133 -0.5795 16 14 4.8130 -4.6130 1.5032 17 1 5.4931 -5.7972 0.9199 18 1 5.6928 -3.9902 2.5247 19 1 3.5395 -5.0367 2.1388 20 6 2.1414 -6.1372 -3.2528 21 6 3.1402 -6.5056 -4.1445 22 6 2.8900 -7.4727 -5.0984 23 6 1.6426 -8.0647 -5.1742 24 6 0.6441 -7.6956 -4.2917 25 6 0.8901 -6.7343 -3.3310 26 1 -0.3633 0.0299 1.0272 27 1 -0.3633 0.8746 -0.5395 28 1 -0.3633 -0.9045 -0.4877 29 1 2.3792 1.5833 -1.0277 30 1 1.6084 2.0284 0.5137 31 1 3.1499 1.1385 0.5138 32 1 3.2198 -1.1817 0.1112 33 1 -0.2936 -1.6676 0.9089 34 1 4.0889 -2.4512 0.6007 35 1 4.1130 -6.0399 -4.0891 36 1 3.6680 -7.7633 -5.7889 37 1 1.4480 -8.8172 -5.9241 38 1 -0.3290 -8.1602 -4.3532 39 1 0.1099 -6.4468 -2.6418 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000000162154.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 23 2020 11:52:11 Heat of formation + Delta-G solvation = 71.316380 kcal Electronic energy + Delta-G solvation = -26481.541805 eV Core-core repulsion = 22612.649467 eV Total energy + Delta-G solvation = -3868.892337 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 334.087 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -40.63665 -39.27773 -38.43941 -37.21681 -35.70695 -33.63972 -31.50746 -31.21980 -30.76228 -29.02997 -28.45268 -27.70363 -25.94692 -23.59095 -22.72786 -21.83694 -21.67681 -20.40369 -19.05098 -18.30288 -17.37784 -16.35001 -16.04250 -15.81405 -15.39117 -14.98889 -14.68212 -14.50522 -13.98737 -13.72032 -13.53532 -13.41906 -13.23894 -13.01279 -12.80132 -12.55084 -12.47634 -12.23272 -11.91516 -11.65843 -11.54072 -11.18620 -11.09703 -10.83825 -10.50350 -10.42197 -10.19659 -9.92867 -9.63356 -9.34983 -9.16802 -8.77506 -8.72549 -8.05620 -7.28955 -6.80153 -5.64605 -5.07761 1.26262 1.49390 1.56031 2.51461 2.70813 2.84914 3.35837 3.47824 3.62827 3.71789 3.78160 3.98102 4.01277 4.73058 4.88250 4.93186 5.02090 5.06969 5.09165 5.12045 5.28956 5.34491 5.46819 5.52953 5.54941 5.57822 5.58394 5.79474 5.84530 5.93411 6.17390 6.32111 6.51748 6.54100 6.61415 6.66148 6.81110 6.95845 7.01788 7.07481 7.27394 7.68293 7.71694 7.87125 8.39698 8.51455 10.19496 Molecular weight = 334.09amu Principal moments of inertia in cm(-1) A = 0.011331 B = 0.005287 C = 0.004163 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2470.573328 B = 5294.915492 C = 6724.996779 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.058 3.942 2 N -0.586 5.586 3 C 0.078 3.922 4 C 0.270 3.730 5 C -0.320 4.320 6 C 0.356 3.644 7 O -0.498 6.498 8 C 0.174 3.826 9 N -0.269 5.269 10 N -0.349 5.349 11 C 0.105 3.895 12 Cl -0.006 7.006 13 C -0.162 4.162 14 C 0.076 3.924 15 O -0.849 6.849 16 Si 0.860 3.140 17 H -0.267 1.267 18 H -0.283 1.283 19 H -0.303 1.303 20 C 0.179 3.821 21 C -0.137 4.137 22 C -0.100 4.100 23 C -0.139 4.139 24 C -0.104 4.104 25 C -0.119 4.119 26 H 0.067 0.933 27 H 0.073 0.927 28 H 0.092 0.908 29 H 0.066 0.934 30 H 0.072 0.928 31 H 0.082 0.918 32 H 0.178 0.822 33 H 0.082 0.918 34 H -0.016 1.016 35 H 0.133 0.867 36 H 0.127 0.873 37 H 0.122 0.878 38 H 0.125 0.875 39 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.086 4.476 -3.783 10.812 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.084 4.084 2 N -0.286 5.286 3 C -0.065 4.065 4 C 0.133 3.867 5 C -0.333 4.333 6 C 0.223 3.777 7 O -0.377 6.377 8 C 0.007 3.993 9 N -0.089 5.089 10 N -0.131 5.131 11 C -0.039 4.039 12 Cl 0.022 6.978 13 C -0.173 4.173 14 C -0.044 4.044 15 O -0.795 6.795 16 Si 0.690 3.310 17 H -0.191 1.191 18 H -0.209 1.209 19 H -0.232 1.232 20 C 0.086 3.914 21 C -0.158 4.158 22 C -0.118 4.118 23 C -0.158 4.158 24 C -0.123 4.123 25 C -0.140 4.140 26 H 0.085 0.915 27 H 0.092 0.908 28 H 0.110 0.890 29 H 0.085 0.915 30 H 0.091 0.909 31 H 0.101 0.899 32 H 0.195 0.805 33 H 0.097 0.903 34 H 0.000 1.000 35 H 0.151 0.849 36 H 0.145 0.855 37 H 0.140 0.860 38 H 0.143 0.857 39 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges -9.940 3.275 -3.978 11.196 hybrid contribution 0.882 0.035 0.470 1.000 sum -9.058 3.310 -3.508 10.262 Atomic orbital electron populations 1.22566 0.79648 1.04326 1.01901 1.46620 1.06581 1.05419 1.70005 1.22008 0.97494 0.84081 1.02873 1.22983 0.98894 0.84171 0.80624 1.18258 1.00934 0.94667 1.19442 1.22496 0.84759 0.91178 0.79282 1.90545 1.63998 1.29568 1.53638 1.19806 0.91413 0.94306 0.93788 1.77674 1.11972 1.03178 1.16060 1.45864 1.08088 1.26782 1.32323 1.21190 0.82983 0.99485 1.00218 1.98317 1.31494 1.72027 1.95996 1.22165 0.96531 0.96062 1.02559 1.22009 0.92026 0.94060 0.96289 1.94987 1.28611 1.88161 1.67784 0.87589 0.78408 0.84047 0.81005 1.19117 1.20914 1.23204 1.17518 0.95304 0.89526 0.89068 1.21297 0.99878 0.99974 0.94655 1.20928 0.97116 0.96006 0.97789 1.21100 0.93536 1.01077 1.00043 1.20969 0.99283 0.97029 0.95007 1.21040 0.96297 0.96520 1.00100 0.91504 0.90846 0.88996 0.91507 0.90925 0.89903 0.80489 0.90288 0.99964 0.84874 0.85530 0.86012 0.85663 0.84991 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 0.52 8.74 59.85 0.52 1.05 16 2 N -0.59 -6.66 3.31 -190.04 -0.63 -7.29 16 3 C 0.08 0.61 10.70 59.85 0.64 1.26 16 4 C 0.27 4.39 9.39 -16.26 -0.15 4.24 16 5 C -0.32 -6.39 5.25 -105.20 -0.55 -6.94 16 6 C 0.36 6.55 8.81 31.84 0.28 6.83 16 7 O -0.50 -11.40 17.17 5.39 0.09 -11.31 16 8 C 0.17 4.32 6.26 -82.77 -0.52 3.80 16 9 N -0.27 -6.71 12.13 33.43 0.41 -6.31 16 10 N -0.35 -8.51 3.75 -7.79 -0.03 -8.54 16 11 C 0.11 2.77 6.83 -16.82 -0.11 2.66 16 12 Cl -0.01 -0.16 24.24 -51.86 -1.26 -1.42 16 13 C -0.16 -4.42 4.46 -104.69 -0.47 -4.89 16 14 C 0.08 2.17 2.74 36.01 0.10 2.27 16 15 O -0.85 -28.64 17.30 -35.23 -0.61 -29.25 16 16 Si 0.86 23.27 27.42 -169.99 -4.66 18.61 16 17 H -0.27 -7.36 6.67 56.52 0.38 -6.98 16 18 H -0.28 -7.47 7.11 56.52 0.40 -7.06 16 19 H -0.30 -8.06 7.11 56.52 0.40 -7.66 16 20 C 0.18 3.70 6.36 -83.62 -0.53 3.17 16 21 C -0.14 -2.51 8.81 -39.39 -0.35 -2.86 16 22 C -0.10 -1.44 10.04 -39.61 -0.40 -1.84 16 23 C -0.14 -1.81 10.04 -39.55 -0.40 -2.21 16 24 C -0.10 -1.48 10.04 -39.61 -0.40 -1.88 16 25 C -0.12 -2.16 9.76 -39.40 -0.38 -2.54 16 26 H 0.07 0.49 7.27 -51.93 -0.38 0.11 16 27 H 0.07 0.48 8.08 -51.93 -0.42 0.06 16 28 H 0.09 1.04 4.94 -51.93 -0.26 0.79 16 29 H 0.07 0.51 8.14 -51.93 -0.42 0.08 16 30 H 0.07 0.38 8.07 -51.93 -0.42 -0.04 16 31 H 0.08 0.65 8.02 -51.93 -0.42 0.24 16 32 H 0.18 3.16 5.49 -52.48 -0.29 2.87 16 33 H 0.08 1.07 4.45 -52.48 -0.23 0.84 16 34 H -0.02 -0.41 4.73 -51.93 -0.25 -0.66 16 35 H 0.13 2.56 6.19 -52.49 -0.32 2.23 16 36 H 0.13 1.45 8.06 -52.48 -0.42 1.03 16 37 H 0.12 1.19 8.06 -52.49 -0.42 0.77 16 38 H 0.13 1.40 8.06 -52.49 -0.42 0.98 16 39 H 0.13 2.48 8.06 -52.49 -0.42 2.05 16 LS Contribution 342.04 15.07 5.15 5.15 Total: -1.00 -40.41 342.04 -8.17 -48.57 By element: Atomic # 1 Polarization: -6.43 SS G_CDS: -3.92 Total: -10.35 kcal Atomic # 6 Polarization: 4.84 SS G_CDS: -2.72 Total: 2.12 kcal Atomic # 7 Polarization: -21.89 SS G_CDS: -0.25 Total: -22.14 kcal Atomic # 8 Polarization: -40.04 SS G_CDS: -0.52 Total: -40.56 kcal Atomic # 14 Polarization: 23.27 SS G_CDS: -4.66 Total: 18.61 kcal Atomic # 17 Polarization: -0.16 SS G_CDS: -1.26 Total: -1.42 kcal Total LS contribution 5.15 Total: 5.15 kcal Total: -40.41 -8.17 -48.57 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000000162154.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 119.891 kcal (2) G-P(sol) polarization free energy of solvation -40.408 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 79.483 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.167 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -48.575 kcal (6) G-S(sol) free energy of system = (1) + (5) 71.316 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds