Wall clock time and date at job start Thu Mar 4 2021 13:35:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42895 * 1 3 3 C 1.42904 * 114.00059 * 2 1 4 4 H 1.08995 * 112.84670 * 341.19978 * 3 2 1 5 5 C 1.53784 * 113.68611 * 112.46541 * 3 2 1 6 6 C 1.53790 * 87.07960 * 139.99364 * 5 3 2 7 7 H 1.08996 * 113.68954 * 89.12215 * 6 5 3 8 8 N 1.46495 * 113.61375 * 220.01453 * 6 5 3 9 9 C 1.46506 * 119.99738 * 37.50003 * 8 6 5 10 10 C 1.34774 * 120.00297 * 217.49543 * 8 6 5 11 11 O 1.21576 * 119.99724 * 3.72638 * 10 8 6 12 12 C 1.47703 * 120.00211 * 183.73019 * 10 8 6 13 13 N 1.31808 * 126.51983 * 352.62893 * 12 10 8 14 14 N 1.28470 * 110.07646 * 180.02562 * 13 12 10 15 15 C 1.46494 * 124.88501 * 180.02562 * 14 13 12 16 16 C 1.35039 * 110.22650 * 0.02562 * 14 13 12 17 17 C 1.50703 * 126.38069 * 179.97438 * 16 14 13 18 18 O 1.42900 * 109.47074 * 329.99323 * 17 16 14 19 19 Si 1.86306 * 109.46763 * 209.99519 * 17 16 14 20 20 C 1.35360 * 107.22881 * 0.23616 * 16 14 13 21 21 C 1.53779 * 113.61310 * 209.99810 * 3 2 1 22 22 H 1.08994 * 109.47076 * 299.99544 * 1 2 3 23 23 H 1.08996 * 109.47159 * 60.00020 * 1 2 3 24 24 H 1.09001 * 109.47134 * 179.97438 * 1 2 3 25 25 H 1.09001 * 113.61550 * 25.44756 * 5 3 2 26 26 H 1.09003 * 113.61142 * 254.53592 * 5 3 2 27 27 H 1.08998 * 109.46727 * 263.98274 * 9 8 6 28 28 H 1.08992 * 109.47357 * 23.98746 * 9 8 6 29 29 H 1.09002 * 109.46976 * 143.98856 * 9 8 6 30 30 H 1.09005 * 109.47657 * 269.97713 * 15 14 13 31 31 H 1.09002 * 109.47304 * 29.97971 * 15 14 13 32 32 H 1.09000 * 109.46979 * 149.97810 * 15 14 13 33 33 H 1.08997 * 109.47260 * 89.99695 * 17 16 14 34 34 H 0.96701 * 114.00155 * 300.00309 * 18 17 16 35 35 H 1.48500 * 109.99756 * 180.02562 * 19 17 16 36 36 H 1.48495 * 109.99962 * 301.31938 * 19 17 16 37 37 H 1.08006 * 127.24739 * 179.75850 * 20 16 14 38 38 H 1.09003 * 113.61126 * 105.39221 * 21 3 2 39 39 H 1.08991 * 113.69808 * 334.49855 * 21 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 1 1.3137 2.0788 -0.3237 5 6 2.7531 1.6510 1.3014 6 6 3.8221 2.3199 0.4211 7 1 3.6222 3.3707 0.2118 8 7 5.1929 2.0819 0.8796 9 6 5.5629 0.7786 1.4372 10 6 6.1137 3.0618 0.7884 11 8 5.7911 4.1638 0.3890 12 6 7.5148 2.7968 1.1736 13 7 7.9776 1.7034 1.7459 14 7 9.2428 1.8096 1.9415 15 6 10.0848 0.7810 2.5572 16 6 9.6850 3.0060 1.4978 17 6 11.1047 3.5090 1.5484 18 8 11.7720 2.9393 2.6762 19 14 11.1004 5.3657 1.7019 20 6 8.6143 3.6713 1.0047 21 6 3.3755 1.3719 -0.7045 22 1 -0.3633 0.5137 0.8900 23 1 -0.3633 0.5138 -0.8899 24 1 -0.3633 -1.0277 -0.0005 25 1 3.1169 0.7770 1.8418 26 1 2.2132 2.3503 1.9399 27 1 5.4997 0.8176 2.5246 28 1 4.8816 0.0157 1.0607 29 1 6.5828 0.5330 1.1411 30 1 10.1165 0.9350 3.6358 31 1 9.6702 -0.2041 2.3428 32 1 11.0941 0.8466 2.1510 33 1 11.6249 3.2212 0.6348 34 1 11.3626 3.1544 3.5255 35 1 12.4947 5.8744 1.7521 36 1 10.3814 5.9689 0.5511 37 1 8.6023 4.6605 0.5712 38 1 3.3381 1.8458 -1.6853 39 1 3.9105 0.4223 -0.7134 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_10122440_13259642.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:35:05 Heat of formation + Delta-G solvation = 21.268140 kcal Electronic energy + Delta-G solvation = -22647.798114 eV Core-core repulsion = 19175.220066 eV Total energy + Delta-G solvation = -3472.578048 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 282.141 amu Computer time = 0.68 seconds Orbital eigenvalues (eV) -43.89358 -41.40192 -39.75304 -38.02186 -37.50446 -35.31565 -34.24291 -32.58178 -28.75310 -28.27041 -27.63377 -26.86844 -26.74464 -25.50066 -23.43698 -22.06844 -20.78180 -20.21165 -18.83412 -18.37682 -17.66901 -17.50400 -17.05426 -16.86811 -16.54927 -16.22194 -15.93935 -15.75687 -15.51958 -15.11554 -15.00916 -14.58161 -14.18655 -14.03950 -13.68547 -13.50050 -13.45145 -13.40969 -13.17697 -12.72288 -12.50561 -12.35413 -12.23796 -11.93122 -11.87447 -11.66040 -11.26215 -10.86857 -10.49122 -10.21955 -9.98886 -9.70346 -4.97547 0.39741 0.78507 1.18639 1.51708 1.68618 1.87604 1.98733 2.19533 2.89677 3.12588 3.27274 3.32602 3.43658 3.48707 3.76811 3.81531 3.90976 4.23285 4.29234 4.30697 4.35586 4.42119 4.46797 4.52134 4.55547 4.58776 4.63816 4.68725 4.69567 4.75744 4.81902 4.88775 4.91502 4.93386 5.09462 5.20637 5.48199 5.71315 6.18460 6.25901 6.56109 6.73945 7.00697 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.023 3.977 2 O -0.396 6.396 3 C 0.067 3.933 4 H 0.106 0.894 5 C -0.155 4.155 6 C 0.116 3.884 7 H 0.113 0.887 8 N -0.588 5.588 9 C 0.077 3.923 10 C 0.597 3.403 11 O -0.572 6.572 12 C -0.037 4.037 13 N -0.251 5.251 14 N -0.261 5.261 15 C 0.077 3.923 16 C -0.004 4.004 17 C -0.033 4.033 18 O -0.542 6.542 19 Si 0.786 3.214 20 C -0.198 4.198 21 C -0.146 4.146 22 H 0.050 0.950 23 H 0.050 0.950 24 H 0.093 0.907 25 H 0.098 0.902 26 H 0.084 0.916 27 H 0.064 0.936 28 H 0.082 0.918 29 H 0.092 0.908 30 H 0.110 0.890 31 H 0.100 0.900 32 H 0.115 0.885 33 H 0.128 0.872 34 H 0.398 0.602 35 H -0.281 1.281 36 H -0.293 1.293 37 H 0.158 0.842 38 H 0.080 0.920 39 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.195 -3.274 4.409 5.620 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 O -0.315 6.315 3 C 0.009 3.991 4 H 0.124 0.876 5 C -0.194 4.194 6 C 0.012 3.988 7 H 0.131 0.869 8 N -0.318 5.318 9 C -0.065 4.065 10 C 0.385 3.615 11 O -0.450 6.450 12 C -0.194 4.194 13 N -0.090 5.090 14 N -0.050 5.050 15 C -0.062 4.062 16 C -0.129 4.129 17 C -0.145 4.145 18 O -0.350 6.350 19 Si 0.690 3.310 20 C -0.226 4.226 21 C -0.185 4.185 22 H 0.069 0.931 23 H 0.069 0.931 24 H 0.111 0.889 25 H 0.117 0.883 26 H 0.103 0.897 27 H 0.082 0.918 28 H 0.101 0.899 29 H 0.110 0.890 30 H 0.128 0.872 31 H 0.119 0.881 32 H 0.133 0.867 33 H 0.145 0.855 34 H 0.249 0.751 35 H -0.207 1.207 36 H -0.220 1.220 37 H 0.176 0.824 38 H 0.099 0.901 39 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges 1.505 -3.520 3.867 5.441 hybrid contribution -0.116 0.482 -0.872 1.003 sum 1.389 -3.038 2.995 4.487 Atomic orbital electron populations 1.22966 0.79699 1.03737 1.00873 1.87906 1.21294 1.27613 1.94652 1.23491 0.93770 0.85733 0.96110 0.87601 1.23914 0.96306 1.01393 0.97776 1.22403 0.79835 1.00414 0.96130 0.86896 1.47667 1.09493 1.13830 1.60827 1.22164 1.02794 0.82688 0.98902 1.17265 0.83457 0.83771 0.77041 1.90761 1.80783 1.24261 1.49188 1.21659 0.95001 0.94156 1.08619 1.73698 0.94864 1.22548 1.17859 1.45904 1.04830 1.13322 1.40903 1.22674 0.94099 0.89064 1.00334 1.22109 0.98111 0.88199 1.04521 1.24770 0.85620 1.10971 0.93101 1.86478 1.55393 1.76171 1.16935 0.93186 0.78791 0.71185 0.87874 1.21583 0.90547 1.02279 1.08189 1.23686 0.95757 1.00356 0.98694 0.93088 0.93104 0.88883 0.88344 0.89692 0.91777 0.89933 0.88978 0.87190 0.88108 0.86702 0.85468 0.75119 1.20715 1.21961 0.82413 0.90142 0.88935 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.04 10.85 113.37 1.23 1.19 16 2 O -0.40 -1.41 10.72 -148.98 -1.60 -3.01 16 3 C 0.07 0.05 4.31 31.12 0.13 0.19 16 4 H 0.11 -0.23 7.87 -2.39 -0.02 -0.25 16 5 C -0.16 -0.10 7.31 31.12 0.23 0.13 16 6 C 0.12 0.47 4.22 45.52 0.19 0.66 16 7 H 0.11 0.74 7.21 -2.39 -0.02 0.72 16 8 N -0.59 -3.68 3.08 -823.19 -2.54 -6.22 16 9 C 0.08 0.11 8.34 127.77 1.07 1.18 16 10 C 0.60 6.94 7.68 86.74 0.67 7.61 16 11 O -0.57 -10.23 16.41 -3.96 -0.06 -10.29 16 12 C -0.04 -0.32 6.81 42.45 0.29 -0.03 16 13 N -0.25 -1.05 8.52 -48.18 -0.41 -1.46 16 14 N -0.26 0.11 3.70 -355.93 -1.32 -1.21 16 15 C 0.08 -0.64 10.12 127.77 1.29 0.65 16 16 C 0.00 0.00 6.18 41.40 0.26 0.25 16 17 C -0.03 0.14 2.87 71.24 0.20 0.35 16 18 O -0.54 3.98 10.40 -148.98 -1.55 2.43 16 19 Si 0.79 -2.52 31.36 68.60 2.15 -0.37 16 20 C -0.20 -1.19 9.35 22.41 0.21 -0.98 16 21 C -0.15 -0.33 7.43 31.12 0.23 -0.10 16 22 H 0.05 -0.16 8.14 -2.39 -0.02 -0.18 16 23 H 0.05 -0.16 8.14 -2.39 -0.02 -0.18 16 24 H 0.09 -0.29 8.14 -2.39 -0.02 -0.31 16 25 H 0.10 0.07 6.58 -2.39 -0.02 0.06 16 26 H 0.08 -0.06 8.14 -2.39 -0.02 -0.08 16 27 H 0.06 0.04 8.14 -2.39 -0.02 0.02 16 28 H 0.08 -0.06 6.11 -2.39 -0.01 -0.07 16 29 H 0.09 0.23 5.37 -2.39 -0.01 0.22 16 30 H 0.11 -1.36 8.14 -2.38 -0.02 -1.38 16 31 H 0.10 -0.95 8.14 -2.39 -0.02 -0.97 16 32 H 0.11 -1.07 6.77 -2.39 -0.02 -1.09 16 33 H 0.13 -0.55 7.96 -2.39 -0.02 -0.57 16 34 H 0.40 -5.72 8.70 -74.06 -0.64 -6.36 16 35 H -0.28 -0.62 7.11 99.48 0.71 0.09 16 36 H -0.29 -1.17 6.83 99.48 0.68 -0.49 16 37 H 0.16 1.05 6.83 -2.91 -0.02 1.03 16 38 H 0.08 0.16 8.14 -2.39 -0.02 0.14 16 39 H 0.09 0.27 7.01 -2.39 -0.02 0.26 16 Total: 0.00 -19.52 319.16 1.11 -18.41 By element: Atomic # 1 Polarization: -9.82 SS G_CDS: 0.44 Total: -9.39 kcal Atomic # 6 Polarization: 5.11 SS G_CDS: 6.00 Total: 11.11 kcal Atomic # 7 Polarization: -4.62 SS G_CDS: -4.26 Total: -8.88 kcal Atomic # 8 Polarization: -7.66 SS G_CDS: -3.21 Total: -10.87 kcal Atomic # 14 Polarization: -2.52 SS G_CDS: 2.15 Total: -0.37 kcal Total: -19.52 1.11 -18.41 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_10122440_13259642.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 39.674 kcal (2) G-P(sol) polarization free energy of solvation -19.517 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 20.157 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.111 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.406 kcal (6) G-S(sol) free energy of system = (1) + (5) 21.268 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.68 seconds