Wall clock time and date at job start Thu Mar 4 2021 19:25:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 C 1.53002 * 109.47469 * 2 1 4 4 H 1.09002 * 109.47070 * 305.00072 * 3 2 1 5 5 C 1.52997 * 109.46817 * 64.99892 * 3 2 1 6 6 C 1.52999 * 109.47317 * 179.97438 * 5 3 2 7 7 C 1.53005 * 109.47159 * 300.00546 * 6 5 3 8 8 H 1.09002 * 109.46935 * 299.99411 * 7 6 5 9 9 N 1.46500 * 109.47094 * 179.97438 * 7 6 5 10 10 C 1.34779 * 119.99793 * 84.99912 * 9 7 6 11 11 O 1.21568 * 120.00527 * 359.97438 * 10 9 7 12 12 C 1.47715 * 119.99842 * 180.02562 * 10 9 7 13 13 N 1.31807 * 126.51606 * 0.02694 * 12 10 9 14 14 N 1.28476 * 110.07018 * 179.97438 * 13 12 10 15 15 C 1.46495 * 124.88294 * 179.97438 * 14 13 12 16 16 C 1.35034 * 110.22981 * 359.97438 * 14 13 12 17 17 C 1.50698 * 126.38353 * 180.02562 * 16 14 13 18 18 O 1.42907 * 109.47031 * 29.99822 * 17 16 14 19 19 Si 1.86295 * 109.47246 * 149.99835 * 17 16 14 20 20 C 1.35368 * 107.23093 * 359.76400 * 16 14 13 21 21 C 1.52997 * 109.47452 * 59.99536 * 7 6 5 22 22 C 1.53000 * 109.47233 * 184.99697 * 3 2 1 23 23 H 1.08997 * 109.47151 * 300.00410 * 1 2 3 24 24 H 1.09006 * 109.46918 * 59.99351 * 1 2 3 25 25 H 1.08988 * 109.47178 * 179.97438 * 1 2 3 26 26 H 1.09008 * 109.47149 * 240.00076 * 2 1 3 27 27 H 1.08997 * 109.47163 * 120.00146 * 2 1 3 28 28 H 1.08996 * 109.47853 * 300.00202 * 5 3 2 29 29 H 1.09002 * 109.47153 * 60.00231 * 5 3 2 30 30 H 1.09000 * 109.47486 * 180.02562 * 6 5 3 31 31 H 1.09002 * 109.46716 * 60.00091 * 6 5 3 32 32 H 0.97004 * 120.00223 * 264.99822 * 9 7 6 33 33 H 1.08996 * 109.47318 * 89.96974 * 15 14 13 34 34 H 1.09004 * 109.47293 * 209.97557 * 15 14 13 35 35 H 1.09001 * 109.47469 * 329.97151 * 15 14 13 36 36 H 1.08994 * 109.47378 * 270.00167 * 17 16 14 37 37 H 0.96701 * 113.99795 * 179.97438 * 18 17 16 38 38 H 1.48502 * 110.00146 * 178.67911 * 19 17 16 39 39 H 1.48496 * 110.00130 * 300.00037 * 19 17 16 40 40 H 1.08000 * 127.24952 * 180.24236 * 20 16 14 41 41 H 1.08993 * 109.47194 * 179.97438 * 21 7 6 42 42 H 1.09002 * 109.46695 * 59.99734 * 21 7 6 43 43 H 1.08992 * 109.47399 * 300.00166 * 22 3 2 44 44 H 1.09004 * 109.46724 * 60.00652 * 22 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0401 1.4425 0.0000 4 1 1.6055 1.9816 -0.8418 5 6 1.6353 2.1265 1.3073 6 6 2.1459 3.5688 1.3077 7 6 3.6708 3.5700 1.1822 8 1 4.1050 3.0307 2.0241 9 7 4.1596 4.9511 1.1820 10 6 4.3842 5.5866 2.3491 11 8 4.1808 5.0140 3.4021 12 6 4.8766 6.9792 2.3489 13 7 5.1375 7.7187 1.2895 14 7 5.5479 8.8806 1.6530 15 6 5.9290 9.9589 0.7375 16 6 5.5773 8.9650 3.0004 17 6 5.9995 10.1624 3.8121 18 8 5.7070 11.3576 3.0854 19 14 5.0725 10.1755 5.4280 20 6 5.1513 7.7754 3.4860 21 6 4.0755 2.8860 -0.1251 22 6 3.5649 1.4443 -0.1256 23 1 -0.3633 0.5139 0.8899 24 1 -0.3633 0.5140 -0.8900 25 1 -0.3633 -1.0275 -0.0005 26 1 1.8933 -0.5139 -0.8901 27 1 1.8933 -0.5138 0.8899 28 1 0.5490 2.1253 1.3970 29 1 2.0699 1.5874 2.1492 30 1 1.8579 4.0559 2.2393 31 1 1.7116 4.1081 0.4659 32 1 4.3216 5.4081 0.3419 33 1 5.0545 10.5683 0.5097 34 1 6.6928 10.5799 1.2054 35 1 6.3234 9.5307 -0.1841 36 1 7.0704 10.1093 4.0080 37 1 5.9526 12.1699 3.5491 38 1 5.5032 11.3339 6.2513 39 1 3.6111 10.2478 5.1746 40 1 5.0457 7.4926 4.5230 41 1 5.1618 2.8873 -0.2147 42 1 3.6412 3.4254 -0.9669 43 1 3.9995 0.9052 0.7161 44 1 3.8532 0.9570 -1.0571 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_10466078_13259642.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 19:25:22 Heat of formation + Delta-G solvation = -6.871317 kcal Electronic energy + Delta-G solvation = -23940.900396 eV Core-core repulsion = 20474.709083 eV Total energy + Delta-G solvation = -3466.191313 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 294.173 amu Computer time = 0.78 seconds Orbital eigenvalues (eV) -43.83036 -41.00577 -39.39081 -38.06569 -36.12521 -34.49546 -33.46756 -32.66514 -31.76669 -29.56576 -28.25664 -26.74217 -25.03004 -24.02222 -23.34089 -22.12434 -21.64635 -21.07339 -20.43175 -18.68219 -18.48402 -17.56086 -17.45283 -17.27367 -16.29724 -16.02005 -15.76062 -15.56763 -15.32222 -14.97578 -14.88341 -14.66335 -14.36330 -14.23941 -14.02237 -13.81592 -13.65528 -13.36494 -13.18829 -13.03009 -12.78202 -12.50315 -12.42081 -12.32348 -12.08008 -11.87261 -11.65533 -11.52102 -11.33578 -11.09584 -11.03448 -10.98044 -10.28055 -9.99909 -9.88681 -4.89844 0.42930 0.79729 1.26050 1.52303 1.63775 1.96942 2.09823 2.29430 2.98241 3.26434 3.52712 3.65757 3.71418 3.84622 4.01571 4.08327 4.16838 4.28155 4.34991 4.36919 4.39015 4.40350 4.46716 4.49585 4.54501 4.55656 4.64034 4.70282 4.71635 4.77562 4.84664 5.02307 5.07939 5.13897 5.16189 5.20186 5.24255 5.26211 5.30663 5.33583 5.45170 5.53381 5.60545 5.67368 6.37968 6.49745 6.81359 7.11267 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.156 4.156 2 C -0.119 4.119 3 C -0.085 4.085 4 H 0.073 0.927 5 C -0.109 4.109 6 C -0.125 4.125 7 C 0.146 3.854 8 H 0.072 0.928 9 N -0.705 5.705 10 C 0.604 3.396 11 O -0.564 6.564 12 C -0.039 4.039 13 N -0.268 5.268 14 N -0.265 5.265 15 C 0.088 3.912 16 C 0.025 3.975 17 C -0.046 4.046 18 O -0.554 6.554 19 Si 0.773 3.227 20 C -0.193 4.193 21 C -0.119 4.119 22 C -0.109 4.109 23 H 0.054 0.946 24 H 0.054 0.946 25 H 0.053 0.947 26 H 0.066 0.934 27 H 0.060 0.940 28 H 0.069 0.931 29 H 0.058 0.942 30 H 0.045 0.955 31 H 0.069 0.931 32 H 0.413 0.587 33 H 0.088 0.912 34 H 0.118 0.882 35 H 0.102 0.898 36 H 0.118 0.882 37 H 0.406 0.594 38 H -0.264 1.264 39 H -0.312 1.312 40 H 0.183 0.817 41 H 0.074 0.926 42 H 0.078 0.922 43 H 0.062 0.938 44 H 0.079 0.921 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.695 2.925 -2.135 5.174 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.214 4.214 2 C -0.156 4.156 3 C -0.104 4.104 4 H 0.092 0.908 5 C -0.147 4.147 6 C -0.163 4.163 7 C 0.042 3.958 8 H 0.090 0.910 9 N -0.356 5.356 10 C 0.389 3.611 11 O -0.442 6.442 12 C -0.197 4.197 13 N -0.106 5.106 14 N -0.054 5.054 15 C -0.051 4.051 16 C -0.100 4.100 17 C -0.156 4.156 18 O -0.365 6.365 19 Si 0.676 3.324 20 C -0.220 4.220 21 C -0.157 4.157 22 C -0.147 4.147 23 H 0.073 0.927 24 H 0.073 0.927 25 H 0.072 0.928 26 H 0.085 0.915 27 H 0.078 0.922 28 H 0.088 0.912 29 H 0.077 0.923 30 H 0.064 0.936 31 H 0.087 0.913 32 H 0.249 0.751 33 H 0.106 0.894 34 H 0.136 0.864 35 H 0.121 0.879 36 H 0.136 0.864 37 H 0.259 0.741 38 H -0.189 1.189 39 H -0.240 1.240 40 H 0.200 0.800 41 H 0.092 0.908 42 H 0.097 0.903 43 H 0.081 0.919 44 H 0.097 0.903 Dipole moment (debyes) X Y Z Total from point charges 2.838 2.610 -2.572 4.635 hybrid contribution 0.054 1.409 0.059 1.411 sum 2.893 4.019 -2.513 5.553 Atomic orbital electron populations 1.21836 0.95989 1.01671 1.01861 1.21554 0.95863 0.96039 1.02178 1.21202 0.95534 0.96054 0.97590 0.90826 1.21566 1.01009 0.94138 0.97986 1.21867 0.94932 0.97994 1.01533 1.21088 0.94114 0.80782 0.99772 0.90951 1.45911 1.66255 1.15099 1.08290 1.17032 0.76488 0.83462 0.84086 1.90776 1.53939 1.67067 1.32370 1.21822 1.10483 0.96116 0.91271 1.73448 1.16467 0.93865 1.26857 1.45680 1.43867 1.09836 1.06015 1.22476 1.03333 0.86149 0.93133 1.21192 1.06619 0.97608 0.84561 1.24421 1.06848 0.81786 1.02571 1.86464 1.87218 1.16297 1.46534 0.93385 0.75950 0.87604 0.75439 1.21645 1.07063 0.92440 1.00894 1.21751 1.01690 0.96571 0.95646 1.21525 0.94989 0.95295 1.02876 0.92712 0.92700 0.92762 0.91480 0.92163 0.91241 0.92275 0.93610 0.91252 0.75061 0.89374 0.86376 0.87912 0.86431 0.74123 1.18934 1.24021 0.79984 0.90755 0.90296 0.91875 0.90260 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 0.10 9.67 71.98 0.70 0.80 16 2 C -0.12 0.14 5.40 30.59 0.17 0.30 16 3 C -0.09 0.09 2.19 -10.79 -0.02 0.07 16 4 H 0.07 -0.09 8.14 -2.39 -0.02 -0.11 16 5 C -0.11 -0.16 4.96 30.59 0.15 0.00 16 6 C -0.12 -0.47 5.49 30.60 0.17 -0.31 16 7 C 0.15 0.53 2.45 44.99 0.11 0.64 16 8 H 0.07 0.55 7.58 -2.39 -0.02 0.54 16 9 N -0.71 -3.72 5.07 -445.52 -2.26 -5.98 16 10 C 0.60 6.66 7.79 86.75 0.68 7.33 16 11 O -0.56 -9.54 16.59 -3.93 -0.07 -9.61 16 12 C -0.04 -0.37 7.13 42.46 0.30 -0.06 16 13 N -0.27 -1.99 11.67 -48.17 -0.56 -2.56 16 14 N -0.27 -1.06 3.70 -355.94 -1.32 -2.37 16 15 C 0.09 -0.29 10.12 127.77 1.29 1.00 16 16 C 0.03 0.08 6.22 41.40 0.26 0.33 16 17 C -0.05 0.19 2.86 71.24 0.20 0.39 16 18 O -0.55 2.74 10.38 -148.98 -1.55 1.19 16 19 Si 0.77 -2.29 31.22 68.60 2.14 -0.15 16 20 C -0.19 -1.18 9.35 22.41 0.21 -0.97 16 21 C -0.12 0.16 5.39 30.58 0.16 0.33 16 22 C -0.11 0.21 5.20 30.58 0.16 0.37 16 23 H 0.05 -0.01 6.56 -2.39 -0.02 -0.02 16 24 H 0.05 -0.05 8.14 -2.38 -0.02 -0.06 16 25 H 0.05 -0.04 8.14 -2.39 -0.02 -0.06 16 26 H 0.07 -0.13 8.14 -2.38 -0.02 -0.15 16 27 H 0.06 -0.03 8.14 -2.39 -0.02 -0.05 16 28 H 0.07 0.09 6.57 -2.39 -0.02 0.07 16 29 H 0.06 0.17 8.14 -2.39 -0.02 0.15 16 30 H 0.05 0.40 8.14 -2.39 -0.02 0.38 16 31 H 0.07 0.18 8.14 -2.39 -0.02 0.16 16 32 H 0.41 0.83 8.33 -92.71 -0.77 0.06 16 33 H 0.09 -0.31 8.14 -2.39 -0.02 -0.33 16 34 H 0.12 -0.78 6.77 -2.39 -0.02 -0.79 16 35 H 0.10 -0.58 8.14 -2.39 -0.02 -0.60 16 36 H 0.12 -1.11 7.96 -2.39 -0.02 -1.13 16 37 H 0.41 -5.34 8.74 -74.06 -0.65 -5.99 16 38 H -0.26 0.33 7.11 99.48 0.71 1.03 16 39 H -0.31 -2.32 7.11 99.48 0.71 -1.61 16 40 H 0.18 0.43 7.01 -2.91 -0.02 0.41 16 41 H 0.07 -0.13 8.14 -2.39 -0.02 -0.15 16 42 H 0.08 -0.24 8.14 -2.39 -0.02 -0.26 16 43 H 0.06 -0.05 8.14 -2.39 -0.02 -0.07 16 44 H 0.08 -0.28 8.14 -2.39 -0.02 -0.30 16 Total: 0.00 -18.68 350.58 0.54 -18.14 By element: Atomic # 1 Polarization: -8.51 SS G_CDS: -0.38 Total: -8.89 kcal Atomic # 6 Polarization: 5.69 SS G_CDS: 4.53 Total: 10.23 kcal Atomic # 7 Polarization: -6.77 SS G_CDS: -4.14 Total: -10.91 kcal Atomic # 8 Polarization: -6.80 SS G_CDS: -1.61 Total: -8.41 kcal Atomic # 14 Polarization: -2.29 SS G_CDS: 2.14 Total: -0.15 kcal Total: -18.68 0.54 -18.14 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_10466078_13259642.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 11.269 kcal (2) G-P(sol) polarization free energy of solvation -18.684 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -7.415 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.544 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.140 kcal (6) G-S(sol) free energy of system = (1) + (5) -6.871 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.78 seconds