Wall clock time and date at job start Thu Mar 4 2021 19:29:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 N 1.28472 * 124.88107 * 2 1 4 4 C 1.31804 * 110.07089 * 179.97438 * 3 2 1 5 5 C 1.47713 * 126.51566 * 180.26544 * 4 3 2 6 6 O 1.21579 * 119.99612 * 179.68936 * 5 4 3 7 7 N 1.34767 * 120.00149 * 359.68773 * 5 4 3 8 8 C 1.46502 * 119.99999 * 180.02562 * 7 5 4 9 9 H 1.08994 * 112.85072 * 23.79916 * 8 7 5 10 10 C 1.53780 * 113.61481 * 155.00038 * 8 7 5 11 11 C 1.53781 * 87.08411 * 89.11240 * 10 8 7 12 12 H 1.08997 * 113.61303 * 270.88470 * 11 10 8 13 13 C 1.50700 * 113.61535 * 140.06180 * 11 10 8 14 14 C 1.38247 * 119.97630 * 299.73044 * 13 11 10 15 15 C 1.38199 * 120.02175 * 179.76413 * 14 13 11 16 16 C 1.38454 * 119.97571 * 0.50793 * 15 14 13 17 17 F 1.35104 * 120.02149 * 179.76150 * 16 15 14 18 18 C 1.38451 * 119.95226 * 359.74592 * 16 15 14 19 19 C 1.38206 * 119.97296 * 359.97438 * 18 16 15 20 20 C 1.53782 * 87.07875 * 25.43251 * 11 10 8 21 21 C 1.41505 * 106.96418 * 0.02562 * 4 3 2 22 22 C 1.35029 * 124.88588 * 179.97438 * 2 1 3 23 23 C 1.50695 * 126.38538 * 0.06774 * 22 2 1 24 24 O 1.42898 * 109.47488 * 29.98549 * 23 22 2 25 25 Si 1.86303 * 109.47100 * 149.98442 * 23 22 2 26 26 H 1.09006 * 109.47029 * 270.03551 * 1 2 3 27 27 H 1.09007 * 109.47555 * 30.03942 * 1 2 3 28 28 H 1.08996 * 109.47089 * 150.03925 * 1 2 3 29 29 H 0.96999 * 120.00298 * 359.97438 * 7 5 4 30 30 H 1.08998 * 113.61432 * 203.66245 * 10 8 7 31 31 H 1.09003 * 113.61675 * 334.56201 * 10 8 7 32 32 H 1.07999 * 119.98243 * 0.02562 * 14 13 11 33 33 H 1.08005 * 120.00901 * 180.24741 * 15 14 13 34 34 H 1.07997 * 120.01503 * 179.97438 * 18 16 15 35 35 H 1.08000 * 119.98860 * 180.02562 * 19 18 16 36 36 H 1.08994 * 113.61161 * 220.01919 * 20 11 10 37 37 H 1.08998 * 113.61636 * 89.11502 * 20 11 10 38 38 H 1.07997 * 127.24741 * 179.97438 * 21 4 3 39 39 H 1.08998 * 109.47148 * 269.98261 * 23 22 2 40 40 H 0.96705 * 113.99733 * 59.99485 * 24 23 22 41 41 H 1.48499 * 109.99996 * 58.68302 * 25 23 22 42 42 H 1.48504 * 110.00038 * 179.97438 * 25 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.1997 1.0539 0.0000 4 6 3.4739 0.7170 0.0006 5 6 4.6271 1.6400 0.0062 6 8 5.7596 1.1978 0.0118 7 7 4.4239 2.9723 0.0052 8 6 5.5677 3.8877 0.0103 9 1 6.4742 3.4347 -0.3909 10 6 5.2534 5.2696 -0.5868 11 6 4.8352 5.6993 0.8293 12 1 3.7840 5.5134 1.0494 13 6 5.2704 7.0963 1.1896 14 6 6.6143 7.4207 1.1976 15 6 7.0141 8.7029 1.5231 16 6 6.0690 9.6600 1.8514 17 9 6.4592 10.9124 2.1744 18 6 4.7237 9.3326 1.8481 19 6 4.3258 8.0512 1.5167 20 6 5.7777 4.6037 1.3550 21 6 3.5271 -0.6971 0.0003 22 6 2.2373 -1.1076 0.0005 23 6 1.7534 -2.5348 -0.0003 24 8 0.4960 -2.6111 -0.6749 25 14 2.9953 -3.6111 -0.8780 26 1 -0.3633 0.0006 1.0277 27 1 -0.3634 0.8897 -0.5145 28 1 -0.3633 -0.8903 -0.5132 29 1 3.5204 3.3251 0.0003 30 1 6.1328 5.7941 -0.9603 31 1 4.4301 5.2597 -1.3011 32 1 7.3515 6.6729 0.9453 33 1 8.0638 8.9572 1.5254 34 1 3.9857 10.0781 2.1045 35 1 3.2764 7.7957 1.5137 36 1 5.3777 4.0561 2.2083 37 1 6.8005 4.9461 1.5122 38 1 4.4108 -1.3179 0.0003 39 1 1.6361 -2.8792 1.0271 40 1 0.5257 -2.3193 -1.5964 41 1 4.3155 -3.5158 -0.2049 42 1 2.5300 -5.0213 -0.8851 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_10466350_13259642.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 19:29:06 Heat of formation + Delta-G solvation = 30.348598 kcal Electronic energy + Delta-G solvation = -27079.387811 eV Core-core repulsion = 22943.527175 eV Total energy + Delta-G solvation = -4135.860636 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 332.132 amu Computer time = 0.98 seconds Orbital eigenvalues (eV) -49.91739 -43.86375 -41.52421 -40.17521 -38.62631 -38.09633 -34.74296 -34.22686 -32.61759 -32.12319 -31.32112 -28.61460 -26.89767 -26.69180 -26.01429 -24.47097 -23.92685 -22.55207 -22.26066 -21.11296 -20.19196 -19.14074 -18.72404 -17.77542 -17.53821 -17.34167 -17.11964 -16.99200 -16.65763 -16.62097 -16.05954 -15.77546 -15.71514 -15.53527 -15.37655 -15.07926 -14.73627 -14.47601 -14.20506 -14.00619 -13.93332 -13.67325 -13.62187 -13.43659 -13.39550 -12.92418 -12.59235 -12.34216 -12.20822 -11.87583 -11.85335 -11.67883 -11.34637 -11.22620 -10.86087 -10.32666 -10.08118 -10.00996 -9.97681 -9.48423 -4.96785 0.12064 0.26936 0.41756 0.78928 1.18625 1.55085 1.71074 1.97242 2.07411 2.25745 2.55798 3.12919 3.29832 3.32181 3.33337 3.45827 3.66164 3.70997 3.82555 3.95893 3.96567 4.02870 4.20399 4.31750 4.32692 4.33973 4.39192 4.41871 4.50302 4.59160 4.65658 4.78495 4.80348 4.86226 4.89453 5.02095 5.03688 5.05340 5.14248 5.18836 5.20062 5.28451 5.49268 5.63971 5.67911 5.92330 6.35975 6.53401 6.80744 7.09606 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.062 3.938 2 N -0.257 5.257 3 N -0.259 5.259 4 C -0.038 4.038 5 C 0.606 3.394 6 O -0.568 6.568 7 N -0.688 5.688 8 C 0.112 3.888 9 H 0.093 0.907 10 C -0.123 4.123 11 C -0.064 4.064 12 H 0.110 0.890 13 C -0.081 4.081 14 C -0.090 4.090 15 C -0.159 4.159 16 C 0.065 3.935 17 F -0.156 7.156 18 C -0.159 4.159 19 C -0.089 4.089 20 C -0.143 4.143 21 C -0.198 4.198 22 C -0.007 4.007 23 C -0.034 4.034 24 O -0.541 6.541 25 Si 0.791 3.209 26 H 0.088 0.912 27 H 0.106 0.894 28 H 0.138 0.862 29 H 0.416 0.584 30 H 0.107 0.893 31 H 0.087 0.913 32 H 0.151 0.849 33 H 0.143 0.857 34 H 0.143 0.857 35 H 0.153 0.847 36 H 0.065 0.935 37 H 0.104 0.896 38 H 0.160 0.840 39 H 0.127 0.873 40 H 0.400 0.600 41 H -0.292 1.292 42 H -0.281 1.281 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.513 -1.836 -3.753 7.738 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 N -0.047 5.047 3 N -0.097 5.097 4 C -0.196 4.196 5 C 0.392 3.608 6 O -0.446 6.446 7 N -0.339 5.339 8 C 0.007 3.993 9 H 0.111 0.889 10 C -0.161 4.161 11 C -0.083 4.083 12 H 0.128 0.872 13 C -0.081 4.081 14 C -0.108 4.108 15 C -0.177 4.177 16 C 0.046 3.954 17 F -0.134 7.134 18 C -0.178 4.178 19 C -0.107 4.107 20 C -0.181 4.181 21 C -0.226 4.226 22 C -0.132 4.132 23 C -0.146 4.146 24 O -0.349 6.349 25 Si 0.694 3.306 26 H 0.106 0.894 27 H 0.125 0.875 28 H 0.156 0.844 29 H 0.253 0.747 30 H 0.126 0.874 31 H 0.106 0.894 32 H 0.169 0.831 33 H 0.161 0.839 34 H 0.161 0.839 35 H 0.170 0.830 36 H 0.083 0.917 37 H 0.122 0.878 38 H 0.177 0.823 39 H 0.144 0.856 40 H 0.252 0.748 41 H -0.219 1.219 42 H -0.208 1.208 Dipole moment (debyes) X Y Z Total from point charges -6.209 -2.043 -3.114 7.241 hybrid contribution 0.248 0.314 1.007 1.084 sum -5.961 -1.729 -2.107 6.554 Atomic orbital electron populations 1.22967 0.70389 1.08264 1.05972 1.45733 1.09055 1.01614 1.48265 1.73465 1.02436 1.14771 1.19060 1.21722 0.91015 0.94121 1.12718 1.17037 0.86311 0.82160 0.75323 1.90793 1.24018 1.77795 1.51950 1.45426 1.10689 1.04333 1.73437 1.21960 0.89705 0.89700 0.97958 0.88854 1.23390 1.03532 0.93179 0.95960 1.21576 1.00527 0.89422 0.96736 0.87159 1.19939 0.93202 0.95821 0.99112 1.21128 0.96361 0.95397 0.97886 1.21367 1.00215 0.93605 1.02535 1.18113 0.94332 0.79900 1.03080 1.91473 1.91925 1.39423 1.90622 1.21381 0.94078 0.99110 1.03244 1.21211 1.01048 0.91346 0.97104 1.23586 1.01158 0.96330 0.97071 1.21623 0.97307 0.93829 1.09821 1.22074 0.90599 0.92301 1.08249 1.24812 0.94515 0.92107 1.03131 1.86451 1.29026 1.88610 1.30837 0.93167 0.73388 0.75513 0.88484 0.89362 0.87503 0.84428 0.74699 0.87443 0.89445 0.83117 0.83892 0.83886 0.82976 0.91658 0.87808 0.82261 0.85564 0.74848 1.21886 1.20779 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.53 11.00 127.77 1.41 0.88 16 2 N -0.26 0.28 3.70 -355.93 -1.32 -1.03 16 3 N -0.26 -0.76 11.67 -48.17 -0.56 -1.33 16 4 C -0.04 -0.24 7.13 42.46 0.30 0.06 16 5 C 0.61 4.93 7.82 86.75 0.68 5.61 16 6 O -0.57 -8.63 16.53 -3.97 -0.07 -8.70 16 7 N -0.69 -0.92 5.26 -443.03 -2.33 -3.25 16 8 C 0.11 -0.08 4.32 45.52 0.20 0.12 16 9 H 0.09 0.26 7.46 -2.39 -0.02 0.25 16 10 C -0.12 0.65 7.29 31.12 0.23 0.87 16 11 C -0.06 0.31 3.85 -11.01 -0.04 0.27 16 12 H 0.11 -0.73 8.09 -2.39 -0.02 -0.75 16 13 C -0.08 0.17 5.29 -19.86 -0.11 0.07 16 14 C -0.09 0.13 8.62 22.26 0.19 0.33 16 15 C -0.16 -0.26 10.03 22.31 0.22 -0.04 16 16 C 0.06 0.31 7.30 22.37 0.16 0.47 16 17 F -0.16 -1.30 17.27 44.97 0.78 -0.53 16 18 C -0.16 -0.25 10.03 22.31 0.22 -0.02 16 19 C -0.09 0.15 9.71 22.26 0.22 0.36 16 20 C -0.14 0.32 7.25 31.12 0.23 0.55 16 21 C -0.20 -0.90 9.35 22.41 0.21 -0.69 16 22 C -0.01 0.00 6.18 41.40 0.26 0.26 16 23 C -0.03 0.18 2.99 71.23 0.21 0.39 16 24 O -0.54 4.54 10.02 -148.98 -1.49 3.05 16 25 Si 0.79 -3.43 31.37 68.60 2.15 -1.28 16 26 H 0.09 -0.77 8.14 -2.38 -0.02 -0.79 16 27 H 0.11 -1.14 8.14 -2.38 -0.02 -1.16 16 28 H 0.14 -1.65 5.00 -2.39 -0.01 -1.67 16 29 H 0.42 -0.97 8.43 -92.71 -0.78 -1.75 16 30 H 0.11 -0.67 7.73 -2.39 -0.02 -0.69 16 31 H 0.09 -0.55 8.14 -2.39 -0.02 -0.57 16 32 H 0.15 -0.82 6.65 -2.91 -0.02 -0.84 16 33 H 0.14 -0.11 8.06 -2.91 -0.02 -0.13 16 34 H 0.14 -0.14 8.06 -2.91 -0.02 -0.17 16 35 H 0.15 -0.96 8.05 -2.91 -0.02 -0.98 16 36 H 0.06 0.03 8.14 -2.39 -0.02 0.01 16 37 H 0.10 -0.38 6.30 -2.39 -0.02 -0.40 16 38 H 0.16 0.81 6.84 -2.91 -0.02 0.79 16 39 H 0.13 -0.62 7.96 -2.39 -0.02 -0.64 16 40 H 0.40 -6.36 8.39 -74.05 -0.62 -6.98 16 41 H -0.29 -0.83 6.83 99.48 0.68 -0.15 16 42 H -0.28 -0.35 7.11 99.48 0.71 0.36 16 Total: 0.00 -21.29 357.52 1.44 -19.84 By element: Atomic # 1 Polarization: -15.96 SS G_CDS: -0.30 Total: -16.27 kcal Atomic # 6 Polarization: 4.90 SS G_CDS: 4.59 Total: 9.49 kcal Atomic # 7 Polarization: -1.40 SS G_CDS: -4.21 Total: -5.61 kcal Atomic # 8 Polarization: -4.09 SS G_CDS: -1.56 Total: -5.65 kcal Atomic # 9 Polarization: -1.30 SS G_CDS: 0.78 Total: -0.53 kcal Atomic # 14 Polarization: -3.43 SS G_CDS: 2.15 Total: -1.28 kcal Total: -21.29 1.44 -19.84 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_10466350_13259642.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 50.192 kcal (2) G-P(sol) polarization free energy of solvation -21.286 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 28.905 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.443 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.843 kcal (6) G-S(sol) free energy of system = (1) + (5) 30.349 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.98 seconds