Wall clock time and date at job start Thu Mar 4 2021 13:30:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46501 * 1 3 3 N 1.28469 * 124.88384 * 2 1 4 4 C 1.31800 * 110.07384 * 180.15634 * 3 2 1 5 5 C 1.47717 * 126.52288 * 179.81509 * 4 3 2 6 6 O 1.21569 * 120.00289 * 179.68503 * 5 4 3 7 7 N 1.34774 * 119.99583 * 359.68945 * 5 4 3 8 8 C 1.46499 * 120.00133 * 179.97438 * 7 5 4 9 9 H 1.09003 * 112.84469 * 336.19957 * 8 7 5 10 10 C 1.54049 * 113.61109 * 107.50629 * 8 7 5 11 11 C 1.53786 * 86.98426 * 89.11993 * 10 8 7 12 12 H 1.09002 * 113.61357 * 270.83585 * 11 10 8 13 13 C 1.50697 * 113.61519 * 140.01979 * 11 10 8 14 14 C 1.38328 * 120.00625 * 140.58887 * 13 11 10 15 15 Cl 1.73597 * 120.01678 * 359.97438 * 14 13 11 16 16 C 1.38378 * 119.96930 * 179.69621 * 14 13 11 17 17 C 1.38197 * 119.98965 * 0.59855 * 16 14 13 18 18 C 1.38262 * 120.01123 * 359.70029 * 17 16 14 19 19 C 1.38225 * 120.02655 * 359.97381 * 18 17 16 20 20 C 1.53781 * 87.17350 * 25.42668 * 11 10 8 21 21 C 1.41506 * 106.96488 * 359.55328 * 4 3 2 22 22 C 1.35033 * 124.88335 * 179.65193 * 2 1 3 23 23 C 1.50691 * 126.38596 * 0.04846 * 22 2 1 24 24 O 1.42899 * 109.47469 * 329.99879 * 23 22 2 25 25 Si 1.86301 * 109.47030 * 209.99690 * 23 22 2 26 26 H 1.08997 * 109.47345 * 270.34349 * 1 2 3 27 27 H 1.09007 * 109.47193 * 30.34588 * 1 2 3 28 28 H 1.09001 * 109.47078 * 150.33819 * 1 2 3 29 29 H 0.96999 * 120.00152 * 0.02562 * 7 5 4 30 30 H 1.08992 * 113.69868 * 334.60103 * 10 8 7 31 31 H 1.09000 * 113.61076 * 203.61862 * 10 8 7 32 32 H 1.08008 * 120.00768 * 180.32165 * 16 14 13 33 33 H 1.07999 * 119.99388 * 179.72304 * 17 16 14 34 34 H 1.08001 * 119.98421 * 180.02562 * 18 17 16 35 35 H 1.07997 * 119.99330 * 180.02562 * 19 18 17 36 36 H 1.08999 * 113.61567 * 89.07405 * 20 11 10 37 37 H 1.08998 * 113.61196 * 219.97759 * 20 11 10 38 38 H 1.08000 * 127.25245 * 180.26160 * 21 4 3 39 39 H 1.09004 * 109.47463 * 90.00203 * 23 22 2 40 40 H 0.96699 * 113.99616 * 299.99874 * 24 23 22 41 41 H 1.48499 * 110.00288 * 58.68358 * 25 23 22 42 42 H 1.48506 * 110.00193 * 180.02562 * 25 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.1997 1.0538 0.0000 4 6 3.4740 0.7169 -0.0034 5 6 4.6273 1.6399 -0.0084 6 8 5.7597 1.1977 -0.0053 7 7 4.4241 2.9722 -0.0161 8 6 5.5678 3.8876 -0.0205 9 1 6.4723 3.4368 0.3882 10 6 5.7853 4.5970 -1.3706 11 6 4.8398 5.6943 -0.8540 12 1 3.7897 5.5072 -1.0786 13 6 5.2768 7.0893 -1.2200 14 6 4.3371 8.0327 -1.5946 15 17 2.6541 7.6101 -1.6439 16 6 4.7387 9.3152 -1.9245 17 6 6.0793 9.6492 -1.8915 18 6 7.0187 8.7040 -1.5230 19 6 6.6175 7.4247 -1.1868 20 6 5.2504 5.2729 0.5669 21 6 3.5272 -0.6971 0.0048 22 6 2.2373 -1.1077 0.0067 23 6 1.7534 -2.5348 0.0144 24 8 0.4950 -2.6075 0.6876 25 14 2.9940 -3.6064 0.8994 26 1 -0.3634 0.0062 1.0276 27 1 -0.3634 0.8869 -0.5192 28 1 -0.3633 -0.8930 -0.5086 29 1 3.5205 3.3250 -0.0181 30 1 5.3897 4.0459 -2.2237 31 1 6.8087 4.9392 -1.5241 32 1 4.0050 10.0538 -2.2121 33 1 6.3932 10.6489 -2.1533 34 1 8.0662 8.9657 -1.4970 35 1 7.3517 6.6869 -0.8986 36 1 6.1278 5.7996 0.9421 37 1 4.4233 5.2672 1.2767 38 1 4.4108 -1.3180 0.0087 39 1 1.6374 -2.8847 -1.0114 40 1 0.5234 -2.3110 1.6075 41 1 3.1849 -3.1204 2.2896 42 1 2.5287 -5.0166 0.9133 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_10565092_13259642.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:30:53 Heat of formation + Delta-G solvation = 66.418017 kcal Electronic energy + Delta-G solvation = -27222.678310 eV Core-core repulsion = 23198.035945 eV Total energy + Delta-G solvation = -4024.642365 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 348.103 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -43.85948 -41.56633 -40.27948 -38.79732 -38.16635 -37.42110 -34.79432 -34.28113 -32.66167 -31.71594 -31.66225 -28.64653 -26.93111 -26.72854 -26.20075 -24.47914 -23.60445 -22.54341 -22.21709 -21.09923 -20.16731 -19.22694 -18.31190 -17.64566 -17.57140 -17.18755 -17.03030 -16.61154 -16.39815 -16.06966 -15.75115 -15.71660 -15.33986 -15.10782 -14.87028 -14.78190 -14.74804 -14.41081 -14.08603 -13.73589 -13.48029 -13.42272 -13.35980 -12.96576 -12.70602 -12.69047 -12.48517 -12.29706 -12.15306 -12.00369 -11.77666 -11.55284 -11.32438 -11.25227 -11.08430 -10.31743 -10.03838 -9.98586 -9.82786 -9.58324 -4.88956 0.18248 0.29165 0.41707 0.81341 1.16572 1.21500 1.53238 1.67482 1.93695 2.06604 2.27187 2.63512 3.08571 3.29178 3.33913 3.40429 3.59922 3.66491 3.86177 3.94613 3.97858 4.10647 4.17377 4.27517 4.34217 4.39677 4.40591 4.42882 4.47792 4.61326 4.64268 4.68797 4.72535 4.75364 4.83468 4.89161 4.98384 5.01384 5.12181 5.24449 5.30412 5.41929 5.49659 5.57852 5.66328 5.87422 6.26772 6.35081 6.79452 7.08622 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.078 3.922 2 N -0.265 5.265 3 N -0.267 5.267 4 C -0.040 4.040 5 C 0.607 3.393 6 O -0.561 6.561 7 N -0.693 5.693 8 C 0.116 3.884 9 H 0.101 0.899 10 C -0.136 4.136 11 C -0.078 4.078 12 H 0.097 0.903 13 C -0.070 4.070 14 C -0.052 4.052 15 Cl -0.079 7.079 16 C -0.122 4.122 17 C -0.117 4.117 18 C -0.114 4.114 19 C -0.110 4.110 20 C -0.122 4.122 21 C -0.186 4.186 22 C -0.013 4.013 23 C -0.045 4.045 24 O -0.538 6.538 25 Si 0.784 3.216 26 H 0.100 0.900 27 H 0.100 0.900 28 H 0.117 0.883 29 H 0.412 0.588 30 H 0.064 0.936 31 H 0.110 0.890 32 H 0.138 0.862 33 H 0.150 0.850 34 H 0.151 0.849 35 H 0.151 0.849 36 H 0.113 0.887 37 H 0.079 0.921 38 H 0.183 0.817 39 H 0.146 0.854 40 H 0.388 0.612 41 H -0.294 1.294 42 H -0.284 1.284 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.679 0.827 -0.221 1.093 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.061 4.061 2 N -0.054 5.054 3 N -0.105 5.105 4 C -0.198 4.198 5 C 0.393 3.607 6 O -0.438 6.438 7 N -0.343 5.343 8 C 0.011 3.989 9 H 0.119 0.881 10 C -0.174 4.174 11 C -0.096 4.096 12 H 0.115 0.885 13 C -0.070 4.070 14 C -0.078 4.078 15 Cl -0.050 7.050 16 C -0.140 4.140 17 C -0.135 4.135 18 C -0.132 4.132 19 C -0.128 4.128 20 C -0.160 4.160 21 C -0.214 4.214 22 C -0.138 4.138 23 C -0.155 4.155 24 O -0.345 6.345 25 Si 0.687 3.313 26 H 0.118 0.882 27 H 0.118 0.882 28 H 0.135 0.865 29 H 0.249 0.751 30 H 0.083 0.917 31 H 0.128 0.872 32 H 0.156 0.844 33 H 0.167 0.833 34 H 0.168 0.832 35 H 0.168 0.832 36 H 0.131 0.869 37 H 0.098 0.902 38 H 0.200 0.800 39 H 0.163 0.837 40 H 0.238 0.762 41 H -0.221 1.221 42 H -0.210 1.210 Dipole moment (debyes) X Y Z Total from point charges -0.938 0.659 -0.127 1.154 hybrid contribution -1.245 0.170 0.584 1.385 sum -2.183 0.829 0.457 2.379 Atomic orbital electron populations 1.22605 0.70811 1.06682 1.06008 1.45691 1.08968 1.01934 1.48818 1.73471 1.02826 1.14816 1.19414 1.21813 0.90828 0.94553 1.12636 1.17010 0.86430 0.81932 0.75330 1.90784 1.23648 1.77628 1.51691 1.45489 1.10569 1.04648 1.73623 1.21985 0.89778 0.89423 0.97712 0.88109 1.23597 1.00951 0.95810 0.97077 1.21670 1.00469 0.90036 0.97467 0.88451 1.19702 0.93093 0.94956 0.99294 1.21062 0.84926 0.95870 1.05968 1.98360 1.15954 1.93519 1.97137 1.21294 0.97716 0.94674 1.00351 1.21451 0.91826 1.01124 0.99106 1.21611 1.01202 0.92976 0.97450 1.21271 0.94451 0.97554 0.99512 1.23378 1.03366 0.93789 0.95453 1.21731 0.97476 0.93405 1.08739 1.22199 0.90989 0.92088 1.08525 1.24867 0.93448 0.92010 1.05196 1.86580 1.29312 1.88376 1.30248 0.93210 0.83899 0.74755 0.79439 0.88157 0.88169 0.86458 0.75130 0.91683 0.87211 0.84410 0.83259 0.83167 0.83186 0.86907 0.90226 0.79952 0.83688 0.76203 1.22076 1.21040 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 -0.46 10.12 127.77 1.29 0.83 16 2 N -0.26 -0.26 3.70 -355.92 -1.32 -1.58 16 3 N -0.27 -1.37 11.67 -48.17 -0.56 -1.93 16 4 C -0.04 -0.28 7.13 42.46 0.30 0.02 16 5 C 0.61 5.34 7.83 86.75 0.68 6.02 16 6 O -0.56 -8.07 16.52 -3.93 -0.06 -8.14 16 7 N -0.69 -2.48 5.26 -442.59 -2.33 -4.81 16 8 C 0.12 0.12 4.33 45.61 0.20 0.32 16 9 H 0.10 0.32 7.46 -2.39 -0.02 0.31 16 10 C -0.14 0.03 7.28 31.21 0.23 0.26 16 11 C -0.08 0.03 3.65 -11.01 -0.04 -0.01 16 12 H 0.10 0.13 6.54 -2.39 -0.02 0.11 16 13 C -0.07 -0.07 5.29 -19.84 -0.11 -0.17 16 14 C -0.05 -0.16 6.31 22.32 0.14 -0.02 16 15 Cl -0.08 -0.30 27.14 -2.72 -0.07 -0.38 16 16 C -0.12 -0.15 9.83 22.29 0.22 0.07 16 17 C -0.12 0.18 10.05 22.27 0.22 0.40 16 18 C -0.11 0.30 10.05 22.27 0.22 0.52 16 19 C -0.11 0.20 8.54 22.27 0.19 0.39 16 20 C -0.12 0.26 7.29 31.12 0.23 0.49 16 21 C -0.19 -0.65 9.35 22.41 0.21 -0.44 16 22 C -0.01 0.00 6.18 41.40 0.26 0.25 16 23 C -0.05 0.20 2.87 71.23 0.20 0.40 16 24 O -0.54 2.38 10.40 -148.98 -1.55 0.83 16 25 Si 0.78 -2.81 31.23 68.60 2.14 -0.66 16 26 H 0.10 -0.89 8.14 -2.39 -0.02 -0.91 16 27 H 0.10 -0.69 8.14 -2.38 -0.02 -0.71 16 28 H 0.12 -0.88 6.77 -2.39 -0.02 -0.90 16 29 H 0.41 0.59 8.43 -92.71 -0.78 -0.19 16 30 H 0.06 0.16 8.14 -2.39 -0.02 0.14 16 31 H 0.11 -0.32 6.40 -2.39 -0.02 -0.34 16 32 H 0.14 -0.11 8.06 -2.91 -0.02 -0.13 16 33 H 0.15 -0.86 8.06 -2.91 -0.02 -0.89 16 34 H 0.15 -1.07 8.06 -2.91 -0.02 -1.09 16 35 H 0.15 -0.88 6.73 -2.91 -0.02 -0.90 16 36 H 0.11 -0.50 7.64 -2.39 -0.02 -0.52 16 37 H 0.08 -0.16 8.14 -2.39 -0.02 -0.18 16 38 H 0.18 0.00 7.03 -2.91 -0.02 -0.02 16 39 H 0.15 -1.05 7.96 -2.39 -0.02 -1.07 16 40 H 0.39 -3.41 8.70 -74.06 -0.64 -4.05 16 41 H -0.29 -0.86 7.11 99.48 0.71 -0.15 16 42 H -0.28 -0.63 7.11 99.48 0.71 0.08 16 Total: 0.00 -19.14 366.63 0.40 -18.74 By element: Atomic # 1 Polarization: -11.11 SS G_CDS: -0.30 Total: -11.41 kcal Atomic # 6 Polarization: 4.87 SS G_CDS: 4.45 Total: 9.32 kcal Atomic # 7 Polarization: -4.11 SS G_CDS: -4.21 Total: -8.31 kcal Atomic # 8 Polarization: -5.69 SS G_CDS: -1.61 Total: -7.31 kcal Atomic # 14 Polarization: -2.81 SS G_CDS: 2.14 Total: -0.66 kcal Atomic # 17 Polarization: -0.30 SS G_CDS: -0.07 Total: -0.38 kcal Total: -19.14 0.40 -18.74 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_10565092_13259642.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 85.161 kcal (2) G-P(sol) polarization free energy of solvation -19.139 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 66.022 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.396 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.743 kcal (6) G-S(sol) free energy of system = (1) + (5) 66.418 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.03 seconds