Wall clock time and date at job start Thu Mar 4 2021 14:01:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.35894 * 117.00532 * 2 1 4 4 C 1.38718 * 120.05441 * 359.97438 * 3 2 1 5 5 C 1.38161 * 119.94684 * 179.72431 * 4 3 2 6 6 C 1.38250 * 120.05329 * 0.23129 * 5 4 3 7 7 C 1.38285 * 120.11226 * 0.02562 * 6 5 4 8 8 C 1.50703 * 119.97299 * 179.97438 * 7 6 5 9 9 H 1.08998 * 112.84725 * 191.20001 * 8 7 6 10 10 C 1.53785 * 113.61177 * 322.50774 * 8 7 6 11 11 C 1.53783 * 87.07811 * 139.97709 * 10 8 7 12 12 H 1.08993 * 113.61400 * 220.01304 * 11 10 8 13 13 N 1.46506 * 113.68691 * 89.12426 * 11 10 8 14 14 C 1.46499 * 120.00508 * 326.00043 * 13 11 10 15 15 C 1.34783 * 119.99559 * 146.00018 * 13 11 10 16 16 O 1.21569 * 120.00269 * 4.33570 * 15 13 11 17 17 C 1.47711 * 119.99616 * 184.33903 * 15 13 11 18 18 N 1.31807 * 126.52016 * 352.28661 * 17 15 13 19 19 N 1.28467 * 110.07419 * 179.85480 * 18 17 15 20 20 C 1.46495 * 124.88622 * 180.20141 * 19 18 17 21 21 C 1.35038 * 110.23035 * 0.42628 * 19 18 17 22 22 C 1.50697 * 126.38783 * 179.76508 * 21 19 18 23 23 O 1.42898 * 109.46973 * 29.99679 * 22 21 19 24 24 Si 1.86299 * 109.47050 * 149.99790 * 22 21 19 25 25 C 1.35366 * 107.22783 * 359.74279 * 21 19 18 26 26 C 1.53773 * 87.08313 * 334.56577 * 11 10 8 27 27 C 1.38128 * 120.05485 * 359.97438 * 7 6 5 28 28 H 1.09003 * 109.46725 * 60.00167 * 1 2 3 29 29 H 1.08998 * 109.47346 * 180.02562 * 1 2 3 30 30 H 1.09004 * 109.47345 * 300.00212 * 1 2 3 31 31 H 1.07999 * 120.02561 * 359.97438 * 4 3 2 32 32 H 1.07994 * 119.97266 * 180.25182 * 5 4 3 33 33 H 1.07998 * 119.93975 * 180.02562 * 6 5 4 34 34 H 1.09000 * 113.61216 * 254.52842 * 10 8 7 35 35 H 1.08999 * 113.61865 * 25.43050 * 10 8 7 36 36 H 1.09005 * 109.46760 * 23.85058 * 14 13 11 37 37 H 1.08991 * 109.47468 * 143.85238 * 14 13 11 38 38 H 1.08997 * 109.46975 * 263.85925 * 14 13 11 39 39 H 1.08997 * 109.47755 * 270.25208 * 20 19 18 40 40 H 1.08998 * 109.46866 * 30.25661 * 20 19 18 41 41 H 1.09005 * 109.46858 * 150.24874 * 20 19 18 42 42 H 1.09002 * 109.47376 * 270.00029 * 22 21 19 43 43 H 0.96700 * 113.99922 * 60.00438 * 23 22 21 44 44 H 1.48509 * 109.99715 * 179.97438 * 24 22 21 45 45 H 1.48499 * 110.00149 * 301.31968 * 24 22 21 46 46 H 1.08001 * 127.25317 * 180.02562 * 25 21 19 47 47 H 1.09004 * 113.61931 * 270.88299 * 26 11 10 48 48 H 1.09008 * 113.61486 * 139.97876 * 26 11 10 49 49 H 1.08000 * 120.02266 * 180.02562 * 27 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2108 0.0000 4 6 1.2917 2.3749 -0.0005 5 6 1.9214 3.6047 0.0052 6 6 3.3021 3.6756 0.0067 7 6 4.0563 2.5166 0.0019 8 6 5.5612 2.5976 0.0029 9 1 6.0368 1.6373 -0.1963 10 6 6.1165 3.7509 -0.8494 11 6 7.1516 3.9723 0.2662 12 1 7.3473 5.0234 0.4779 13 7 8.3776 3.1885 0.0956 14 6 8.3161 1.8534 -0.5044 15 6 9.5622 3.6959 0.4906 16 8 9.6043 4.7693 1.0597 17 6 10.8092 2.9476 0.2319 18 7 10.9041 1.7212 -0.2415 19 7 12.1391 1.3828 -0.3447 20 6 12.6147 0.0888 -0.8402 21 6 12.9357 2.3896 0.0739 22 6 14.4422 2.3804 0.1132 23 8 14.9407 1.5380 -0.9279 24 14 15.0803 4.1136 -0.1312 25 6 12.1288 3.4089 0.4512 26 6 6.1378 3.3287 1.2267 27 6 3.4315 1.2847 -0.0039 28 1 -0.3633 0.5138 -0.8900 29 1 -0.3634 -1.0276 0.0005 30 1 -0.3634 0.5139 0.8900 31 1 0.2131 2.3200 -0.0014 32 1 1.3346 4.5113 0.0089 33 1 3.7923 4.6379 0.0116 34 1 6.5543 3.4250 -1.7929 35 1 5.4195 4.5803 -0.9692 36 1 7.4239 1.7752 -1.1258 37 1 9.2018 1.6897 -1.1181 38 1 8.2764 1.1022 0.2843 39 1 12.7057 -0.6082 -0.0072 40 1 11.9048 -0.3049 -1.5675 41 1 13.5877 0.2168 -1.3148 42 1 14.7782 2.0023 1.0787 43 1 14.6801 1.8154 -1.8169 44 1 16.5649 4.1181 -0.0939 45 1 14.6027 4.6523 -1.4300 46 1 12.4290 4.3716 0.8377 47 1 5.4465 4.0427 1.6746 48 1 6.5928 2.6620 1.9593 49 1 4.0211 0.3798 -0.0073 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_10860584_13259642.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 14:01:53 Heat of formation + Delta-G solvation = 65.231732 kcal Electronic energy + Delta-G solvation = -31611.188974 eV Core-core repulsion = 27316.537530 eV Total energy + Delta-G solvation = -4294.651444 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 358.173 amu Computer time = 1.16 seconds Orbital eigenvalues (eV) -43.87186 -41.86047 -40.88380 -39.59974 -38.25000 -37.97246 -35.47210 -34.27949 -32.66381 -32.13752 -31.00795 -28.64840 -28.52340 -28.14205 -26.90979 -26.64544 -25.83715 -24.10747 -23.56034 -22.28567 -21.82734 -20.99320 -19.74136 -18.97909 -18.69947 -17.78312 -17.59998 -17.28369 -17.09049 -17.03678 -16.85623 -16.67448 -16.42283 -15.93651 -15.91044 -15.73032 -15.49709 -14.89032 -14.73638 -14.43465 -14.30441 -14.14319 -14.07878 -13.92519 -13.61961 -13.57255 -13.39395 -13.25483 -13.15859 -13.05604 -12.63590 -12.51985 -12.33730 -12.14013 -12.07252 -11.82835 -11.63743 -11.55303 -11.29467 -11.15681 -10.95027 -10.19917 -9.96184 -9.77483 -9.64826 -9.15088 -4.88247 0.32507 0.43297 0.48127 0.81814 1.21664 1.53072 1.67227 1.87865 1.98886 2.24035 2.34940 2.73847 3.03180 3.22666 3.35178 3.43786 3.67377 3.70335 3.87880 3.91634 3.95411 4.07419 4.17901 4.21784 4.27893 4.32265 4.34503 4.35144 4.38099 4.43453 4.49303 4.54177 4.59210 4.62216 4.66896 4.67834 4.70372 4.74248 4.76947 4.83361 4.92751 4.98250 5.01476 5.08361 5.19942 5.27264 5.34298 5.49388 5.56450 5.68890 5.75850 5.82917 6.22653 6.25613 6.43746 6.76225 7.05525 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.020 3.980 2 O -0.341 6.341 3 C 0.110 3.890 4 C -0.221 4.221 5 C -0.082 4.082 6 C -0.159 4.159 7 C -0.033 4.033 8 C -0.074 4.074 9 H 0.110 0.890 10 C -0.128 4.128 11 C 0.112 3.888 12 H 0.098 0.902 13 N -0.583 5.583 14 C 0.067 3.933 15 C 0.599 3.401 16 O -0.565 6.565 17 C -0.039 4.039 18 N -0.257 5.257 19 N -0.267 5.267 20 C 0.064 3.936 21 C -0.012 4.012 22 C -0.044 4.044 23 O -0.536 6.536 24 Si 0.782 3.218 25 C -0.186 4.186 26 C -0.132 4.132 27 C -0.167 4.167 28 H 0.064 0.936 29 H 0.115 0.885 30 H 0.063 0.937 31 H 0.140 0.860 32 H 0.145 0.855 33 H 0.142 0.858 34 H 0.082 0.918 35 H 0.113 0.887 36 H 0.093 0.907 37 H 0.092 0.908 38 H 0.058 0.942 39 H 0.091 0.909 40 H 0.104 0.896 41 H 0.130 0.870 42 H 0.144 0.856 43 H 0.390 0.610 44 H -0.283 1.283 45 H -0.292 1.292 46 H 0.181 0.819 47 H 0.102 0.898 48 H 0.064 0.936 49 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.283 -2.302 -2.101 3.129 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.074 4.074 2 O -0.255 6.255 3 C 0.065 3.935 4 C -0.240 4.240 5 C -0.100 4.100 6 C -0.177 4.177 7 C -0.033 4.033 8 C -0.092 4.092 9 H 0.128 0.872 10 C -0.165 4.165 11 C 0.009 3.991 12 H 0.116 0.884 13 N -0.314 5.314 14 C -0.075 4.075 15 C 0.387 3.613 16 O -0.443 6.443 17 C -0.196 4.196 18 N -0.095 5.095 19 N -0.056 5.056 20 C -0.074 4.074 21 C -0.137 4.137 22 C -0.154 4.154 23 O -0.344 6.344 24 Si 0.685 3.315 25 C -0.214 4.214 26 C -0.171 4.171 27 C -0.185 4.185 28 H 0.082 0.918 29 H 0.133 0.867 30 H 0.081 0.919 31 H 0.158 0.842 32 H 0.163 0.837 33 H 0.159 0.841 34 H 0.100 0.900 35 H 0.131 0.869 36 H 0.111 0.889 37 H 0.110 0.890 38 H 0.076 0.924 39 H 0.110 0.890 40 H 0.122 0.878 41 H 0.147 0.853 42 H 0.162 0.838 43 H 0.240 0.760 44 H -0.210 1.210 45 H -0.219 1.219 46 H 0.198 0.802 47 H 0.121 0.879 48 H 0.083 0.917 49 H 0.146 0.854 Dipole moment (debyes) X Y Z Total from point charges -0.060 -2.774 -2.221 3.554 hybrid contribution -0.196 -0.192 -0.587 0.648 sum -0.255 -2.967 -2.807 4.092 Atomic orbital electron populations 1.23294 0.76636 1.05373 1.02129 1.86036 1.23301 1.27338 1.88801 1.19270 0.92739 0.84687 0.96809 1.21491 1.00928 0.92394 1.09192 1.21251 0.94948 0.97565 0.96270 1.21185 0.93815 0.98720 1.03968 1.19602 0.95284 0.91990 0.96459 1.21829 0.90088 0.99790 0.97454 0.87242 1.23466 0.96890 0.98902 0.97291 1.22020 0.83093 0.96069 0.97962 0.88412 1.47429 1.05496 1.18363 1.60101 1.22394 1.04792 0.81330 0.98991 1.17195 0.82254 0.83926 0.77965 1.90770 1.86857 1.23113 1.43527 1.21735 0.94960 0.93270 1.09679 1.73686 1.02204 1.14599 1.19008 1.45871 1.02214 1.14036 1.43465 1.22874 1.03541 0.78998 1.02030 1.22120 0.96134 0.89621 1.05864 1.24853 0.86032 1.08979 0.95535 1.86557 1.76507 1.52629 1.18682 0.93161 0.77381 0.74943 0.86018 1.21685 0.90210 1.01736 1.07739 1.23424 0.97562 0.99838 0.96237 1.20480 0.91532 0.98786 1.07743 0.91787 0.86697 0.91882 0.84209 0.83749 0.84061 0.89971 0.86921 0.88892 0.88970 0.92375 0.89005 0.87769 0.85252 0.83823 0.75952 1.20971 1.21884 0.80195 0.87944 0.91697 0.85352 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.03 9.81 113.37 1.11 1.08 16 2 O -0.34 -2.08 10.50 -92.36 -0.97 -3.05 16 3 C 0.11 0.65 6.69 22.51 0.15 0.80 16 4 C -0.22 -0.62 9.04 22.37 0.20 -0.41 16 5 C -0.08 -0.07 10.04 22.25 0.22 0.15 16 6 C -0.16 -0.11 8.61 22.28 0.19 0.08 16 7 C -0.03 -0.07 5.29 -19.88 -0.11 -0.17 16 8 C -0.07 0.05 3.31 -11.01 -0.04 0.01 16 9 H 0.11 -0.17 5.58 -2.39 -0.01 -0.18 16 10 C -0.13 0.22 6.66 31.12 0.21 0.42 16 11 C 0.11 0.29 4.40 45.51 0.20 0.49 16 12 H 0.10 0.54 7.32 -2.39 -0.02 0.52 16 13 N -0.58 -2.88 3.08 -823.21 -2.54 -5.42 16 14 C 0.07 0.03 8.17 127.77 1.04 1.08 16 15 C 0.60 6.13 7.68 86.75 0.67 6.80 16 16 O -0.57 -9.07 16.47 -3.93 -0.06 -9.14 16 17 C -0.04 -0.29 6.82 42.46 0.29 0.00 16 18 N -0.26 -1.11 8.51 -48.17 -0.41 -1.52 16 19 N -0.27 -0.10 3.70 -355.94 -1.32 -1.42 16 20 C 0.06 -0.42 11.00 127.77 1.41 0.98 16 21 C -0.01 0.00 6.18 41.40 0.26 0.26 16 22 C -0.04 0.20 2.99 71.24 0.21 0.41 16 23 O -0.54 2.72 10.02 -148.98 -1.49 1.23 16 24 Si 0.78 -2.92 31.23 68.60 2.14 -0.78 16 25 C -0.19 -0.70 9.36 22.41 0.21 -0.49 16 26 C -0.13 -0.14 7.25 31.12 0.23 0.09 16 27 C -0.17 -0.83 9.65 22.37 0.22 -0.61 16 28 H 0.06 -0.22 7.66 -2.39 -0.02 -0.24 16 29 H 0.11 -0.58 8.14 -2.39 -0.02 -0.60 16 30 H 0.06 -0.21 7.66 -2.38 -0.02 -0.22 16 31 H 0.14 -0.14 6.30 -2.91 -0.02 -0.15 16 32 H 0.14 -0.52 8.06 -2.91 -0.02 -0.54 16 33 H 0.14 -0.44 6.65 -2.91 -0.02 -0.46 16 34 H 0.08 -0.17 7.25 -2.39 -0.02 -0.19 16 35 H 0.11 -0.42 6.31 -2.39 -0.02 -0.44 16 36 H 0.09 -0.27 4.58 -2.38 -0.01 -0.28 16 37 H 0.09 0.15 5.35 -2.39 -0.01 0.14 16 38 H 0.06 0.04 8.14 -2.39 -0.02 0.02 16 39 H 0.09 -0.68 8.14 -2.39 -0.02 -0.70 16 40 H 0.10 -0.90 8.14 -2.39 -0.02 -0.91 16 41 H 0.13 -1.19 5.00 -2.38 -0.01 -1.20 16 42 H 0.14 -1.01 7.96 -2.39 -0.02 -1.03 16 43 H 0.39 -3.87 8.39 -74.06 -0.62 -4.49 16 44 H -0.28 -0.57 7.11 99.48 0.71 0.13 16 45 H -0.29 -0.73 7.11 99.48 0.71 -0.02 16 46 H 0.18 0.10 7.02 -2.91 -0.02 0.08 16 47 H 0.10 -0.01 7.72 -2.38 -0.02 -0.03 16 48 H 0.06 0.22 8.14 -2.38 -0.02 0.20 16 49 H 0.13 0.48 8.05 -2.91 -0.02 0.46 16 Total: 0.00 -21.71 388.23 2.44 -19.27 By element: Atomic # 1 Polarization: -10.57 SS G_CDS: 0.42 Total: -10.15 kcal Atomic # 6 Polarization: 4.30 SS G_CDS: 6.67 Total: 10.97 kcal Atomic # 7 Polarization: -4.09 SS G_CDS: -4.26 Total: -8.35 kcal Atomic # 8 Polarization: -8.43 SS G_CDS: -2.53 Total: -10.96 kcal Atomic # 14 Polarization: -2.92 SS G_CDS: 2.14 Total: -0.78 kcal Total: -21.71 2.44 -19.27 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_10860584_13259642.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 84.501 kcal (2) G-P(sol) polarization free energy of solvation -21.712 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 62.789 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.443 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.269 kcal (6) G-S(sol) free energy of system = (1) + (5) 65.232 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.17 seconds