Wall clock time and date at job start Thu Mar 4 2021 14:16:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45202 * 1 3 3 C 1.34230 * 116.99836 * 2 1 4 4 O 1.20833 * 119.99930 * 359.97438 * 3 2 1 5 5 C 1.50697 * 120.00262 * 180.27336 * 3 2 1 6 6 H 1.09005 * 112.85050 * 48.51890 * 5 3 2 7 7 C 1.53776 * 113.61980 * 179.72212 * 5 3 2 8 8 C 1.53780 * 87.08410 * 139.97809 * 7 5 3 9 9 H 1.09000 * 113.61054 * 89.11771 * 8 7 5 10 10 N 1.46497 * 113.61483 * 219.93174 * 8 7 5 11 11 C 1.34770 * 120.00269 * 205.00154 * 10 8 7 12 12 O 1.21591 * 120.00017 * 359.97438 * 11 10 8 13 13 C 1.47575 * 120.00244 * 180.02562 * 11 10 8 14 14 C 1.36499 * 120.01136 * 180.02562 * 13 11 10 15 15 N 1.35942 * 120.50536 * 180.02562 * 14 13 11 16 16 C 1.37001 * 132.41106 * 179.97438 * 15 14 13 17 17 C 1.50701 * 126.42961 * 0.02562 * 16 15 14 18 18 O 1.42897 * 109.47049 * 330.00403 * 17 16 15 19 19 Si 1.86302 * 109.47364 * 210.00049 * 17 16 15 20 20 C 1.35008 * 107.14316 * 179.97438 * 16 15 14 21 21 N 1.33586 * 108.65568 * 0.02562 * 20 16 15 22 22 C 1.32419 * 109.22041 * 359.97438 * 21 20 16 23 23 C 1.41252 * 132.11440 * 179.97438 * 22 21 20 24 24 Br 1.89097 * 120.25541 * 0.02562 * 23 22 21 25 25 C 1.35706 * 119.48900 * 179.71004 * 23 22 21 26 26 C 1.53780 * 87.07946 * 334.56775 * 8 7 5 27 27 H 1.08998 * 109.47630 * 300.00638 * 1 2 3 28 28 H 1.09004 * 109.46770 * 60.01042 * 1 2 3 29 29 H 1.09001 * 109.46882 * 180.02562 * 1 2 3 30 30 H 1.09000 * 113.61363 * 254.53316 * 7 5 3 31 31 H 1.09002 * 113.61389 * 25.33961 * 7 5 3 32 32 H 0.97003 * 119.99721 * 25.00411 * 10 8 7 33 33 H 1.07998 * 119.74392 * 0.02562 * 14 13 11 34 34 H 1.09006 * 109.46818 * 89.99830 * 17 16 15 35 35 H 0.96700 * 113.99867 * 299.99866 * 18 17 16 36 36 H 1.48500 * 109.99897 * 180.02562 * 19 17 16 37 37 H 1.48504 * 109.99708 * 301.32155 * 19 17 16 38 38 H 1.07994 * 125.67375 * 179.97438 * 20 16 15 39 39 H 1.07995 * 120.24024 * 180.27461 * 25 23 22 40 40 H 1.08996 * 113.61527 * 270.87817 * 26 8 7 41 41 H 1.08999 * 113.61274 * 139.98029 * 26 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4032 2.2094 -0.0005 5 6 3.5663 1.2750 -0.0062 6 1 4.0206 0.6344 -0.7621 7 6 4.1077 2.7143 -0.0122 8 6 5.1849 2.2296 0.9724 9 1 6.0827 1.8497 0.4850 10 7 5.4796 3.1896 2.0390 11 6 6.6802 3.1695 2.6509 12 8 7.5187 2.3544 2.3180 13 6 6.9769 4.1362 3.7258 14 6 8.1930 4.1164 4.3453 15 7 8.4768 5.0019 5.3370 16 6 9.5911 5.1983 6.1094 17 6 10.8773 4.4159 6.0401 18 8 10.5997 3.0796 5.6168 19 14 11.6746 4.3812 7.7235 20 6 9.3213 6.2249 6.9436 21 7 8.0803 6.6566 6.7024 22 6 7.5472 5.9306 5.7317 23 6 6.2818 5.9698 5.1051 24 35 4.9923 7.2449 5.6411 25 6 6.0010 5.0896 4.1112 26 6 4.1966 1.1274 1.3887 27 1 -0.3634 0.5139 0.8899 28 1 -0.3633 0.5137 -0.8901 29 1 -0.3633 -1.0277 0.0005 30 1 4.5068 3.0266 -0.9772 31 1 3.4183 3.4419 0.4160 32 1 4.8105 3.8397 2.3049 33 1 8.9354 3.3917 4.0453 34 1 11.5528 4.8897 5.3278 35 1 10.0033 2.5966 6.2051 36 1 12.9443 3.6131 7.6684 37 1 11.9393 5.7664 8.1887 38 1 9.9961 6.6294 7.6834 39 1 5.0391 5.1117 3.6208 40 1 3.5322 1.4209 2.2014 41 1 4.6676 0.1586 1.5547 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_10970304_12335884.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 14:16:54 Heat of formation + Delta-G solvation = -16.566449 kcal Electronic energy + Delta-G solvation = -29754.676242 eV Core-core repulsion = 25264.590425 eV Total energy + Delta-G solvation = -4490.085817 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 410.036 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -44.28367 -42.01537 -41.13570 -39.41743 -38.40245 -37.97269 -37.41722 -35.45764 -34.66656 -32.53023 -31.80876 -30.27269 -29.37969 -27.22071 -26.86444 -26.80397 -25.35955 -24.10318 -22.78710 -22.45459 -21.81089 -20.75934 -19.52528 -19.02504 -18.53324 -18.19956 -17.99859 -17.68133 -17.46241 -17.40733 -16.75282 -16.31628 -16.13447 -16.03138 -15.82208 -15.75576 -15.41645 -15.06528 -14.70537 -14.47584 -14.28161 -14.05644 -13.65864 -13.54878 -13.41301 -13.34646 -13.05816 -12.97555 -12.68442 -12.52132 -12.32293 -12.14883 -11.83972 -11.80028 -11.55503 -11.41802 -11.36249 -11.34053 -11.24717 -10.89221 -10.27571 -10.02686 -9.10095 -4.95045 -0.90858 -0.38997 0.18838 0.96300 1.06661 1.11828 1.40321 1.64075 1.69333 1.77603 1.95845 2.07231 2.21671 2.79198 3.06945 3.17387 3.25581 3.32858 3.37990 3.46088 3.47478 3.66235 3.77831 3.83129 4.03407 4.11895 4.24037 4.27049 4.29556 4.33554 4.40649 4.48798 4.54048 4.59743 4.66014 4.69961 4.86341 4.94293 4.95976 5.04328 5.25363 5.34642 5.42209 5.56144 6.29222 6.42207 6.50851 6.66507 6.94981 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.364 6.364 3 C 0.470 3.530 4 O -0.537 6.537 5 C -0.107 4.107 6 H 0.152 0.848 7 C -0.122 4.122 8 C 0.127 3.873 9 H 0.125 0.875 10 N -0.699 5.699 11 C 0.583 3.417 12 O -0.559 6.559 13 C -0.170 4.170 14 C 0.163 3.837 15 N -0.356 5.356 16 C -0.080 4.080 17 C -0.043 4.043 18 O -0.553 6.553 19 Si 0.804 3.196 20 C 0.035 3.965 21 N -0.494 5.494 22 C 0.227 3.773 23 C -0.081 4.081 24 Br 0.003 6.997 25 C -0.024 4.024 26 C -0.129 4.129 27 H 0.061 0.939 28 H 0.061 0.939 29 H 0.127 0.873 30 H 0.100 0.900 31 H 0.099 0.901 32 H 0.415 0.585 33 H 0.196 0.804 34 H 0.121 0.879 35 H 0.396 0.604 36 H -0.287 1.287 37 H -0.268 1.268 38 H 0.207 0.793 39 H 0.183 0.817 40 H 0.092 0.908 41 H 0.096 0.904 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.603 -4.311 -0.006 4.599 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.280 6.280 3 C 0.315 3.685 4 O -0.426 6.426 5 C -0.126 4.126 6 H 0.170 0.830 7 C -0.160 4.160 8 C 0.023 3.977 9 H 0.142 0.858 10 N -0.350 5.350 11 C 0.369 3.631 12 O -0.438 6.438 13 C -0.177 4.177 14 C 0.037 3.963 15 N -0.029 5.029 16 C -0.191 4.191 17 C -0.152 4.152 18 O -0.360 6.360 19 Si 0.705 3.295 20 C -0.115 4.115 21 N -0.213 5.213 22 C -0.018 4.018 23 C -0.164 4.164 24 Br 0.088 6.912 25 C -0.050 4.050 26 C -0.168 4.168 27 H 0.080 0.920 28 H 0.080 0.920 29 H 0.145 0.855 30 H 0.118 0.882 31 H 0.118 0.882 32 H 0.253 0.747 33 H 0.213 0.787 34 H 0.138 0.862 35 H 0.246 0.754 36 H -0.213 1.213 37 H -0.193 1.193 38 H 0.224 0.776 39 H 0.200 0.800 40 H 0.110 0.890 41 H 0.115 0.885 Dipole moment (debyes) X Y Z Total from point charges -0.960 -3.092 0.394 3.261 hybrid contribution -0.134 -0.045 -1.048 1.057 sum -1.094 -3.136 -0.653 3.385 Atomic orbital electron populations 1.23517 0.75113 1.05540 1.02443 1.86524 1.24694 1.33302 1.83483 1.24027 0.92579 0.80971 0.70958 1.90673 1.67902 1.37338 1.46723 1.22443 0.85814 1.01729 1.02608 0.83020 1.23364 0.96509 0.94717 1.01361 1.22512 0.97984 0.89409 0.87823 0.85757 1.45711 1.15208 1.36799 1.37257 1.17517 0.82403 0.82342 0.80794 1.90851 1.47655 1.39853 1.65459 1.19264 0.94642 1.01552 1.02267 1.22287 0.97919 0.90945 0.85190 1.42710 1.12949 1.23119 1.24130 1.22361 0.91269 1.06077 0.99357 1.25155 0.92978 0.82523 1.14522 1.86482 1.71029 1.23541 1.54919 0.93077 0.79676 0.81057 0.75710 1.22848 0.93429 0.94800 1.00403 1.70829 1.09654 1.26270 1.14551 1.20679 0.92173 0.91340 0.97631 1.20556 0.92238 1.01894 1.01690 1.96845 1.49111 1.53910 1.91319 1.21358 1.00278 0.90342 0.92979 1.23438 0.97536 1.01313 0.94483 0.91999 0.92050 0.85529 0.88154 0.88228 0.74686 0.78682 0.86216 0.75390 1.21333 1.19349 0.77600 0.80001 0.88994 0.88501 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.07 10.56 113.37 1.20 1.13 16 2 O -0.36 -0.35 10.57 -51.41 -0.54 -0.89 16 3 C 0.47 0.54 7.48 71.23 0.53 1.07 16 4 O -0.54 -3.77 15.65 21.94 0.34 -3.43 16 5 C -0.11 0.60 4.26 -11.02 -0.05 0.55 16 6 H 0.15 -1.44 8.14 -2.38 -0.02 -1.46 16 7 C -0.12 0.82 7.16 31.12 0.22 1.04 16 8 C 0.13 -0.78 4.24 45.52 0.19 -0.59 16 9 H 0.12 -0.57 7.46 -2.39 -0.02 -0.59 16 10 N -0.70 4.11 5.31 -443.17 -2.35 1.75 16 11 C 0.58 -0.34 7.76 86.71 0.67 0.33 16 12 O -0.56 -3.46 15.87 -4.00 -0.06 -3.53 16 13 C -0.17 0.23 5.84 -20.35 -0.12 0.11 16 14 C 0.16 0.08 9.91 83.65 0.83 0.91 16 15 N -0.36 -0.90 2.93 -337.71 -0.99 -1.89 16 16 C -0.08 -0.04 6.24 41.01 0.26 0.21 16 17 C -0.04 0.14 3.06 71.24 0.22 0.36 16 18 O -0.55 1.70 10.90 -148.98 -1.62 0.08 16 19 Si 0.80 -4.63 31.34 68.60 2.15 -2.48 16 20 C 0.03 0.09 10.44 83.68 0.87 0.96 16 21 N -0.49 -3.91 11.30 -194.10 -2.19 -6.11 16 22 C 0.23 1.30 7.59 134.19 1.02 2.32 16 23 C -0.08 -0.19 6.24 22.42 0.14 -0.05 16 24 Br 0.00 0.01 33.72 -20.37 -0.69 -0.68 16 25 C -0.02 0.07 9.26 22.55 0.21 0.28 16 26 C -0.13 0.83 7.43 31.12 0.23 1.06 16 27 H 0.06 -0.13 8.13 -2.39 -0.02 -0.15 16 28 H 0.06 -0.11 8.13 -2.38 -0.02 -0.13 16 29 H 0.13 -0.97 8.14 -2.39 -0.02 -0.99 16 30 H 0.10 -0.82 8.14 -2.39 -0.02 -0.84 16 31 H 0.10 -0.52 7.41 -2.39 -0.02 -0.54 16 32 H 0.41 -4.29 6.76 -92.71 -0.63 -4.92 16 33 H 0.20 0.06 6.19 -2.91 -0.02 0.04 16 34 H 0.12 -0.33 7.96 -2.38 -0.02 -0.35 16 35 H 0.40 -3.91 8.70 -74.06 -0.64 -4.56 16 36 H -0.29 -0.30 7.11 99.48 0.71 0.41 16 37 H -0.27 0.66 6.80 99.48 0.68 1.34 16 38 H 0.21 -0.52 6.70 -2.91 -0.02 -0.54 16 39 H 0.18 -1.77 6.44 -2.91 -0.02 -1.79 16 40 H 0.09 -0.54 8.09 -2.39 -0.02 -0.56 16 41 H 0.10 -0.66 8.14 -2.39 -0.02 -0.68 16 Total: 0.00 -24.11 373.52 0.33 -23.78 By element: Atomic # 1 Polarization: -16.17 SS G_CDS: -0.13 Total: -16.30 kcal Atomic # 6 Polarization: 3.27 SS G_CDS: 6.43 Total: 9.70 kcal Atomic # 7 Polarization: -0.71 SS G_CDS: -5.54 Total: -6.24 kcal Atomic # 8 Polarization: -5.88 SS G_CDS: -1.89 Total: -7.77 kcal Atomic # 14 Polarization: -4.63 SS G_CDS: 2.15 Total: -2.48 kcal Atomic # 35 Polarization: 0.01 SS G_CDS: -0.69 Total: -0.68 kcal Total: -24.11 0.33 -23.78 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_10970304_12335884.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 7.215 kcal (2) G-P(sol) polarization free energy of solvation -24.112 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -16.897 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.331 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.781 kcal (6) G-S(sol) free energy of system = (1) + (5) -16.566 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.03 seconds