Wall clock time and date at job start Thu Mar 4 2021 14:16:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45201 * 1 3 3 C 1.34222 * 117.00137 * 2 1 4 4 O 1.20833 * 119.99852 * 0.02562 * 3 2 1 5 5 C 1.50696 * 120.00432 * 179.71953 * 3 2 1 6 6 H 1.09009 * 112.84398 * 49.07982 * 5 3 2 7 7 C 1.53780 * 113.61720 * 180.27478 * 5 3 2 8 8 C 1.53785 * 87.07938 * 139.98539 * 7 5 3 9 9 H 1.08996 * 113.61552 * 89.20104 * 8 7 5 10 10 N 1.46498 * 113.61430 * 220.02135 * 8 7 5 11 11 C 1.34777 * 119.99904 * 205.00223 * 10 8 7 12 12 O 1.21563 * 120.00033 * 359.97438 * 11 10 8 13 13 C 1.47706 * 119.99874 * 179.97438 * 11 10 8 14 14 N 1.31817 * 126.52161 * 0.02562 * 13 11 10 15 15 N 1.28465 * 110.07481 * 179.97438 * 14 13 11 16 16 C 1.46502 * 124.88309 * 179.97438 * 15 14 13 17 17 C 1.35029 * 110.23204 * 0.02562 * 15 14 13 18 18 C 1.50707 * 126.38571 * 180.02562 * 17 15 14 19 19 O 1.42897 * 109.47038 * 29.99208 * 18 17 15 20 20 Si 1.86302 * 109.47134 * 149.99706 * 18 17 15 21 21 C 1.35367 * 107.23026 * 359.71801 * 17 15 14 22 22 C 1.53779 * 113.61675 * 277.77760 * 5 3 2 23 23 H 1.08997 * 109.47403 * 60.00337 * 1 2 3 24 24 H 1.09007 * 109.47110 * 179.97438 * 1 2 3 25 25 H 1.08997 * 109.47380 * 299.99656 * 1 2 3 26 26 H 1.09000 * 113.61488 * 254.52849 * 7 5 3 27 27 H 1.08997 * 113.61371 * 25.35219 * 7 5 3 28 28 H 0.96995 * 120.00153 * 24.99448 * 10 8 7 29 29 H 1.09000 * 109.46473 * 89.97846 * 16 15 14 30 30 H 1.08997 * 109.47382 * 209.97931 * 16 15 14 31 31 H 1.09000 * 109.47032 * 329.98231 * 16 15 14 32 32 H 1.09001 * 109.46590 * 269.99316 * 18 17 15 33 33 H 0.96697 * 113.99910 * 60.00093 * 19 18 17 34 34 H 1.48492 * 110.00277 * 58.67639 * 20 18 17 35 35 H 1.48503 * 109.99749 * 180.02562 * 20 18 17 36 36 H 1.07998 * 127.25153 * 180.25661 * 21 17 15 37 37 H 1.08997 * 113.61504 * 334.56326 * 22 5 3 38 38 H 1.09004 * 113.61475 * 105.46661 * 22 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2749 0.0064 6 1 4.0267 0.6382 -0.7493 7 6 4.1077 2.7142 0.0123 8 6 5.1770 2.2242 1.0030 9 1 6.0793 1.8482 0.5209 10 7 5.4617 3.1776 2.0782 11 6 6.6571 3.1547 2.7001 12 8 7.4990 2.3426 2.3692 13 6 6.9444 4.1163 3.7839 14 7 6.1307 5.0457 4.2441 15 7 6.7018 5.7037 5.1880 16 6 6.0894 6.8104 5.9273 17 6 7.9482 5.2294 5.4001 18 6 8.9353 5.7344 6.4208 19 8 8.2296 6.2544 7.5493 20 14 10.0349 4.3334 6.9674 21 6 8.1432 4.2112 4.5297 22 6 4.1854 1.1198 1.4055 23 1 -0.3634 0.5138 -0.8900 24 1 -0.3634 -1.0277 -0.0005 25 1 -0.3634 0.5138 0.8900 26 1 4.5147 3.0316 -0.9478 27 1 3.4149 3.4395 0.4390 28 1 4.7898 3.8254 2.3425 29 1 5.5657 6.4189 6.7994 30 1 6.8650 7.5047 6.2506 31 1 5.3819 7.3309 5.2820 32 1 9.5442 6.5228 5.9782 33 1 7.6661 5.6062 7.9936 34 1 10.7503 3.7632 5.7979 35 1 11.0125 4.8184 7.9746 36 1 9.0283 3.6014 4.4247 37 1 3.5144 1.4090 2.2143 38 1 4.6551 0.1501 1.5701 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_10970304_13259642.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 14:16:59 Heat of formation + Delta-G solvation = -38.068660 kcal Electronic energy + Delta-G solvation = -23477.593910 eV Core-core repulsion = 19711.072111 eV Total energy + Delta-G solvation = -3766.521799 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 296.125 amu Computer time = 0.55 seconds Orbital eigenvalues (eV) -43.81616 -41.89465 -40.57011 -38.99981 -38.18472 -37.27729 -34.66744 -34.23857 -32.58072 -29.50947 -28.65803 -27.15729 -26.88598 -26.52935 -24.32315 -22.33456 -22.06905 -21.17961 -20.50781 -19.14752 -18.86676 -17.91091 -17.60529 -17.52192 -17.35541 -17.11455 -16.43764 -16.30695 -16.00918 -15.68542 -15.52521 -15.13476 -14.94178 -14.40819 -14.22040 -14.03771 -13.83130 -13.65191 -13.63115 -13.45938 -13.01662 -12.66814 -12.60039 -12.37687 -12.30745 -11.83231 -11.77359 -11.76659 -11.33649 -11.06453 -11.02258 -10.21743 -9.98669 -9.96348 -5.09968 0.53367 0.82028 1.12912 1.18043 1.46309 1.61487 1.68193 1.89706 2.22807 2.43737 3.00844 3.20824 3.27364 3.28893 3.34270 3.62883 3.72027 3.91115 4.01289 4.04325 4.17569 4.20372 4.24955 4.28685 4.40855 4.43324 4.51585 4.52383 4.59071 4.60965 4.69675 4.76809 4.83996 5.07169 5.29658 5.39880 5.49481 5.62486 6.17350 6.45549 6.75437 6.86469 7.24048 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.357 6.357 3 C 0.472 3.528 4 O -0.505 6.505 5 C -0.109 4.109 6 H 0.132 0.868 7 C -0.127 4.127 8 C 0.126 3.874 9 H 0.127 0.873 10 N -0.708 5.708 11 C 0.610 3.390 12 O -0.528 6.528 13 C -0.017 4.017 14 N -0.256 5.256 15 N -0.263 5.263 16 C 0.084 3.916 17 C -0.018 4.018 18 C -0.043 4.043 19 O -0.541 6.541 20 Si 0.717 3.283 21 C -0.176 4.176 22 C -0.133 4.133 23 H 0.064 0.936 24 H 0.103 0.897 25 H 0.063 0.937 26 H 0.089 0.911 27 H 0.103 0.897 28 H 0.409 0.591 29 H 0.088 0.912 30 H 0.108 0.892 31 H 0.093 0.907 32 H 0.125 0.875 33 H 0.382 0.618 34 H -0.249 1.249 35 H -0.249 1.249 36 H 0.166 0.834 37 H 0.092 0.908 38 H 0.091 0.909 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.798 -0.142 3.298 3.759 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.273 6.273 3 C 0.315 3.685 4 O -0.392 6.392 5 C -0.129 4.129 6 H 0.150 0.850 7 C -0.165 4.165 8 C 0.021 3.979 9 H 0.144 0.856 10 N -0.359 5.359 11 C 0.394 3.606 12 O -0.402 6.402 13 C -0.176 4.176 14 N -0.093 5.093 15 N -0.052 5.052 16 C -0.056 4.056 17 C -0.142 4.142 18 C -0.154 4.154 19 O -0.347 6.347 20 Si 0.616 3.384 21 C -0.204 4.204 22 C -0.172 4.172 23 H 0.083 0.917 24 H 0.122 0.878 25 H 0.082 0.918 26 H 0.108 0.892 27 H 0.122 0.878 28 H 0.245 0.755 29 H 0.106 0.894 30 H 0.126 0.874 31 H 0.112 0.888 32 H 0.142 0.858 33 H 0.230 0.770 34 H -0.173 1.173 35 H -0.173 1.173 36 H 0.184 0.816 37 H 0.110 0.890 38 H 0.110 0.890 Dipole moment (debyes) X Y Z Total from point charges -1.404 0.358 2.863 3.209 hybrid contribution -0.184 0.627 -0.259 0.703 sum -1.589 0.985 2.604 3.206 Atomic orbital electron populations 1.23321 0.75971 1.04007 1.02683 1.86520 1.23690 1.33284 1.83777 1.23487 0.91596 0.81414 0.72031 1.90685 1.66992 1.36445 1.45124 1.22315 0.87680 1.01018 1.01848 0.84978 1.23387 0.97219 0.94936 1.00945 1.22476 0.97964 0.89561 0.87927 0.85553 1.45774 1.16328 1.37063 1.36759 1.16880 0.81841 0.81856 0.79982 1.90817 1.46518 1.38246 1.64569 1.21757 0.94065 0.99720 1.02056 1.73524 1.25101 1.07207 1.03454 1.45357 1.10066 1.25234 1.24501 1.22360 1.00489 0.86555 0.96151 1.21963 0.89417 0.99436 1.03430 1.24858 0.97183 1.08298 0.85083 1.86496 1.64059 1.41156 1.42947 0.94057 0.80169 0.80971 0.83190 1.21537 1.00127 1.00459 0.98293 1.23459 0.98002 1.01215 0.94538 0.91742 0.87843 0.91786 0.89215 0.87846 0.75496 0.89382 0.87379 0.88828 0.85819 0.77048 1.17303 1.17301 0.81622 0.88975 0.89011 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.56 101.05 1.07 1.05 16 2 O -0.36 -0.54 10.56 -39.24 -0.41 -0.96 16 3 C 0.47 0.87 7.48 36.00 0.27 1.14 16 4 O -0.51 -2.31 15.65 -18.76 -0.29 -2.61 16 5 C -0.11 0.10 4.26 -90.96 -0.39 -0.29 16 6 H 0.13 -0.37 8.14 -51.92 -0.42 -0.79 16 7 C -0.13 0.13 7.16 -25.92 -0.19 -0.06 16 8 C 0.13 -0.04 4.24 -67.12 -0.28 -0.33 16 9 H 0.13 0.02 7.46 -51.93 -0.39 -0.37 16 10 N -0.71 -0.60 5.35 -54.00 -0.29 -0.89 16 11 C 0.61 2.12 7.82 -12.39 -0.10 2.02 16 12 O -0.53 -3.30 16.52 5.31 0.09 -3.22 16 13 C -0.02 -0.05 7.13 -82.76 -0.59 -0.64 16 14 N -0.26 -0.51 11.67 33.42 0.39 -0.12 16 15 N -0.26 -0.05 3.70 -63.85 -0.24 -0.29 16 16 C 0.08 -0.26 10.12 59.85 0.61 0.34 16 17 C -0.02 0.00 6.18 -82.21 -0.51 -0.51 16 18 C -0.04 0.08 2.87 36.01 0.10 0.19 16 19 O -0.54 1.53 10.40 -35.23 -0.37 1.16 16 20 Si 0.72 -1.53 31.36 -169.99 -5.33 -6.86 16 21 C -0.18 -0.34 9.35 -39.36 -0.37 -0.70 16 22 C -0.13 0.12 7.43 -25.92 -0.19 -0.07 16 23 H 0.06 -0.02 8.13 -51.93 -0.42 -0.45 16 24 H 0.10 -0.29 8.14 -51.93 -0.42 -0.71 16 25 H 0.06 -0.03 8.13 -51.93 -0.42 -0.45 16 26 H 0.09 -0.16 8.14 -51.93 -0.42 -0.59 16 27 H 0.10 -0.01 7.41 -51.93 -0.38 -0.39 16 28 H 0.41 -0.09 8.45 -40.82 -0.35 -0.43 16 29 H 0.09 -0.42 8.14 -51.93 -0.42 -0.85 16 30 H 0.11 -0.38 6.77 -51.93 -0.35 -0.73 16 31 H 0.09 -0.33 8.14 -51.93 -0.42 -0.75 16 32 H 0.12 -0.23 7.96 -51.93 -0.41 -0.64 16 33 H 0.38 -2.35 8.70 45.56 0.40 -1.95 16 34 H -0.25 -0.14 6.83 56.52 0.39 0.25 16 35 H -0.25 -0.14 7.11 56.52 0.40 0.26 16 36 H 0.17 0.25 6.83 -52.49 -0.36 -0.11 16 37 H 0.09 -0.05 8.09 -51.93 -0.42 -0.47 16 38 H 0.09 -0.12 8.14 -51.93 -0.42 -0.55 16 LS Contribution 330.56 15.07 4.98 4.98 Total: 0.00 -9.46 330.56 -6.90 -16.35 By element: Atomic # 1 Polarization: -4.85 SS G_CDS: -4.86 Total: -9.70 kcal Atomic # 6 Polarization: 2.72 SS G_CDS: -0.57 Total: 2.15 kcal Atomic # 7 Polarization: -1.17 SS G_CDS: -0.14 Total: -1.30 kcal Atomic # 8 Polarization: -4.63 SS G_CDS: -0.99 Total: -5.62 kcal Atomic # 14 Polarization: -1.53 SS G_CDS: -5.33 Total: -6.86 kcal Total LS contribution 4.98 Total: 4.98 kcal Total: -9.46 -6.90 -16.35 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_10970304_13259642.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -21.715 kcal (2) G-P(sol) polarization free energy of solvation -9.456 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -31.171 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.898 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.354 kcal (6) G-S(sol) free energy of system = (1) + (5) -38.069 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.55 seconds