Wall clock time and date at job start Thu Mar 4 2021 18:05:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46495 * 1 3 3 N 1.28464 * 124.88453 * 2 1 4 4 C 1.31829 * 110.07231 * 180.02562 * 3 2 1 5 5 C 1.47667 * 126.51802 * 179.97438 * 4 3 2 6 6 O 1.21569 * 119.99899 * 180.02562 * 5 4 3 7 7 N 1.34774 * 120.00202 * 0.02562 * 5 4 3 8 8 C 1.39204 * 119.99884 * 184.20910 * 7 5 4 9 9 C 1.40285 * 120.16386 * 144.93965 * 8 7 5 10 10 C 1.47503 * 120.20363 * 359.97438 * 9 8 7 11 11 O 1.21592 * 120.00185 * 4.96854 * 10 9 8 12 12 N 1.34778 * 120.00441 * 184.97004 * 10 9 8 13 13 C 1.46494 * 120.00403 * 180.02562 * 12 10 9 14 14 H 1.08999 * 109.47413 * 34.99375 * 13 12 10 15 15 C 1.53007 * 109.47474 * 154.99784 * 13 12 10 16 16 C 1.52999 * 109.47247 * 179.97438 * 15 13 12 17 17 C 1.52998 * 109.47224 * 300.00099 * 16 15 13 18 18 H 1.09005 * 109.47179 * 300.00082 * 17 16 15 19 19 O 1.42893 * 109.47013 * 180.02562 * 17 16 15 20 20 C 1.53007 * 109.47089 * 59.99804 * 17 16 15 21 21 C 1.52998 * 109.46842 * 274.99788 * 13 12 10 22 22 C 1.39698 * 119.59626 * 180.02562 * 9 8 7 23 23 C 1.37791 * 119.92225 * 359.97438 * 22 9 8 24 24 C 1.38570 * 120.33832 * 0.02562 * 23 22 9 25 25 C 1.38020 * 120.40507 * 359.68055 * 24 23 22 26 26 C 1.41512 * 106.95910 * 0.25877 * 4 3 2 27 27 C 1.35042 * 124.88107 * 180.02562 * 2 1 3 28 28 C 1.50697 * 126.38518 * 359.97438 * 27 2 1 29 29 O 1.42901 * 109.46875 * 30.00236 * 28 27 2 30 30 Si 1.86304 * 109.47117 * 150.00087 * 28 27 2 31 31 H 1.09001 * 109.47285 * 89.98085 * 1 2 3 32 32 H 1.09001 * 109.47444 * 209.97647 * 1 2 3 33 33 H 1.08996 * 109.47591 * 329.98056 * 1 2 3 34 34 H 0.96996 * 120.00329 * 4.48703 * 7 5 4 35 35 H 0.97004 * 119.99734 * 359.97438 * 12 10 9 36 36 H 1.08992 * 109.46876 * 300.00053 * 15 13 12 37 37 H 1.08999 * 109.46474 * 59.99783 * 15 13 12 38 38 H 1.09001 * 109.46639 * 60.00249 * 16 15 13 39 39 H 1.08998 * 109.46950 * 179.97438 * 16 15 13 40 40 H 0.96705 * 113.99977 * 180.02562 * 19 17 16 41 41 H 1.08993 * 109.46726 * 60.00406 * 20 17 16 42 42 H 1.09001 * 109.46836 * 179.97438 * 20 17 16 43 43 H 1.09001 * 109.47435 * 299.99618 * 21 13 12 44 44 H 1.08998 * 109.47310 * 59.99988 * 21 13 12 45 45 H 1.07997 * 120.03584 * 180.02562 * 22 9 8 46 46 H 1.08001 * 119.82940 * 180.02562 * 23 22 9 47 47 H 1.08002 * 119.79851 * 179.97438 * 24 23 22 48 48 H 1.08001 * 119.96232 * 180.32262 * 25 24 23 49 49 H 1.07997 * 127.24907 * 179.74378 * 26 4 3 50 50 H 1.08994 * 109.47222 * 269.99971 * 28 27 2 51 51 H 0.96696 * 114.00374 * 59.99919 * 29 28 27 52 52 H 1.48495 * 109.99822 * 180.02562 * 30 28 27 53 53 H 1.48500 * 110.00016 * 301.31971 * 30 28 27 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.1997 1.0538 0.0000 4 6 3.4741 0.7168 -0.0006 5 6 4.6271 1.6394 -0.0013 6 8 5.7595 1.1972 -0.0022 7 7 4.4240 2.9718 -0.0009 8 6 5.5076 3.8410 -0.0900 9 6 5.3863 5.0490 -0.7930 10 6 4.1105 5.4049 -1.4421 11 8 3.1341 4.6955 -1.2937 12 7 4.0268 6.5165 -2.1996 13 6 2.7595 6.8703 -2.8438 14 1 1.9306 6.5860 -2.1956 15 6 2.7178 8.3794 -3.0930 16 6 1.3946 8.7487 -3.7664 17 6 1.2768 8.0082 -5.1000 18 1 2.1060 8.2924 -5.7480 19 8 0.0412 8.3536 -5.7291 20 6 1.3185 6.4991 -4.8508 21 6 2.6412 6.1297 -4.1774 22 6 6.4815 5.9123 -0.8754 23 6 7.6707 5.5738 -0.2673 24 6 7.7873 4.3799 0.4263 25 6 6.7122 3.5196 0.5215 26 6 3.5272 -0.6973 -0.0070 27 6 2.2372 -1.1078 -0.0005 28 6 1.7532 -2.5349 -0.0006 29 8 0.4951 -2.6111 -0.6738 30 14 2.9940 -3.6114 -0.8795 31 1 -0.3634 0.0003 -1.0277 32 1 -0.3634 -0.8902 0.5135 33 1 -0.3634 0.8897 0.5141 34 1 3.5231 3.3251 0.0656 35 1 4.8055 7.0827 -2.3177 36 1 2.8022 8.9069 -2.1430 37 1 3.5468 8.6635 -3.7413 38 1 0.5655 8.4644 -3.1184 39 1 1.3647 9.8238 -3.9435 40 1 -0.1011 7.9193 -6.5814 41 1 0.4894 6.2149 -4.2030 42 1 1.2341 5.9715 -5.8009 43 1 3.4701 6.4140 -4.8257 44 1 2.6709 5.0547 -3.9999 45 1 6.3959 6.8442 -1.4144 46 1 8.5164 6.2426 -0.3316 47 1 8.7237 4.1231 0.8992 48 1 6.8094 2.5933 1.0683 49 1 4.4107 -1.3183 -0.0131 50 1 1.6369 -2.8792 1.0270 51 1 0.5237 -2.3195 -1.5953 52 1 2.5280 -5.0213 -0.8869 53 1 3.1854 -3.1329 -2.2722 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_11560734_13259642.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 18:05:27 Heat of formation + Delta-G solvation = -39.982470 kcal Electronic energy + Delta-G solvation = -38340.383267 eV Core-core repulsion = 33373.297530 eV Total energy + Delta-G solvation = -4967.085737 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 401.183 amu Computer time = 1.87 seconds Orbital eigenvalues (eV) -43.94262 -42.04294 -40.91395 -39.79128 -38.95595 -38.20216 -37.10233 -35.96293 -34.63715 -34.47724 -32.76424 -32.30127 -31.91972 -30.90545 -29.31577 -28.52502 -26.84966 -25.28245 -24.87839 -23.91853 -23.54586 -22.70886 -22.25026 -21.78597 -21.07638 -20.82167 -19.41760 -18.99956 -18.29337 -18.20527 -17.77084 -17.68167 -17.47114 -17.15253 -16.71662 -16.35383 -16.18190 -15.94189 -15.86203 -15.80353 -15.63993 -15.51100 -15.32496 -15.00403 -14.86447 -14.78143 -14.49122 -14.20434 -14.11327 -13.80932 -13.61606 -13.47290 -13.39629 -13.30149 -13.14774 -12.96160 -12.71472 -12.64328 -12.48047 -12.32362 -12.22585 -12.02367 -11.78421 -11.66222 -11.36180 -11.32084 -11.12831 -10.93147 -10.79530 -10.29267 -10.28525 -10.04059 -9.96313 -9.26296 -4.91517 -0.32607 0.12831 0.50765 0.77670 1.17995 1.47566 1.65555 1.75982 1.88788 1.97080 1.98535 2.14811 2.81453 3.04182 3.20441 3.23670 3.28855 3.52496 3.62440 3.67208 3.75992 3.84999 3.98583 4.06262 4.08746 4.17392 4.22129 4.25800 4.28497 4.30725 4.33003 4.37572 4.39253 4.41448 4.43426 4.46157 4.57067 4.61342 4.62361 4.83965 4.84786 4.92428 4.97059 5.04627 5.06895 5.08475 5.16514 5.20922 5.24935 5.27393 5.35934 5.42191 5.47879 5.61013 5.88708 6.17434 6.24409 6.42528 6.69744 6.83150 6.88562 7.10754 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.077 3.923 2 N -0.262 5.262 3 N -0.267 5.267 4 C -0.045 4.045 5 C 0.603 3.397 6 O -0.537 6.537 7 N -0.649 5.649 8 C 0.180 3.820 9 C -0.185 4.185 10 C 0.561 3.439 11 O -0.573 6.573 12 N -0.704 5.704 13 C 0.146 3.854 14 H 0.067 0.933 15 C -0.113 4.113 16 C -0.111 4.111 17 C 0.104 3.896 18 H 0.071 0.929 19 O -0.589 6.589 20 C -0.144 4.144 21 C -0.121 4.121 22 C -0.058 4.058 23 C -0.137 4.137 24 C -0.069 4.069 25 C -0.152 4.152 26 C -0.180 4.180 27 C -0.012 4.012 28 C -0.046 4.046 29 O -0.537 6.537 30 Si 0.787 3.213 31 H 0.099 0.901 32 H 0.122 0.878 33 H 0.097 0.903 34 H 0.427 0.573 35 H 0.416 0.584 36 H 0.087 0.913 37 H 0.094 0.906 38 H 0.058 0.942 39 H 0.080 0.920 40 H 0.394 0.606 41 H 0.056 0.944 42 H 0.076 0.924 43 H 0.082 0.918 44 H 0.044 0.956 45 H 0.165 0.835 46 H 0.165 0.835 47 H 0.154 0.846 48 H 0.132 0.868 49 H 0.189 0.811 50 H 0.149 0.851 51 H 0.388 0.612 52 H -0.281 1.281 53 H -0.296 1.296 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.228 2.867 -1.165 3.814 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.061 4.061 2 N -0.052 5.052 3 N -0.105 5.105 4 C -0.202 4.202 5 C 0.390 3.610 6 O -0.412 6.412 7 N -0.298 5.298 8 C 0.083 3.917 9 C -0.191 4.191 10 C 0.350 3.650 11 O -0.454 6.454 12 N -0.356 5.356 13 C 0.042 3.958 14 H 0.085 0.915 15 C -0.151 4.151 16 C -0.150 4.150 17 C 0.045 3.955 18 H 0.089 0.911 19 O -0.397 6.397 20 C -0.182 4.182 21 C -0.160 4.160 22 C -0.077 4.077 23 C -0.155 4.155 24 C -0.088 4.088 25 C -0.172 4.172 26 C -0.208 4.208 27 C -0.137 4.137 28 C -0.156 4.156 29 O -0.345 6.345 30 Si 0.690 3.310 31 H 0.117 0.883 32 H 0.141 0.859 33 H 0.116 0.884 34 H 0.270 0.730 35 H 0.255 0.745 36 H 0.105 0.895 37 H 0.112 0.888 38 H 0.077 0.923 39 H 0.099 0.901 40 H 0.243 0.757 41 H 0.074 0.926 42 H 0.094 0.906 43 H 0.100 0.900 44 H 0.063 0.937 45 H 0.182 0.818 46 H 0.183 0.817 47 H 0.172 0.828 48 H 0.149 0.851 49 H 0.206 0.794 50 H 0.166 0.834 51 H 0.238 0.762 52 H -0.207 1.207 53 H -0.223 1.223 Dipole moment (debyes) X Y Z Total from point charges 1.268 2.578 -0.643 2.945 hybrid contribution -0.770 -0.389 -1.161 1.446 sum 0.498 2.190 -1.804 2.881 Atomic orbital electron populations 1.22622 0.70754 1.06760 1.06007 1.45746 1.09051 1.01908 1.48497 1.73603 1.03045 1.14930 1.18938 1.21623 0.90579 0.94535 1.13497 1.17202 0.87100 0.81449 0.75210 1.90758 1.22992 1.77429 1.50028 1.43619 1.11268 1.04933 1.69980 1.18004 0.88781 0.89792 0.95118 1.19803 0.95946 0.98045 1.05314 1.18338 0.87439 0.80943 0.78273 1.90634 1.39316 1.51849 1.63569 1.45765 1.14641 1.25437 1.49735 1.21013 0.85884 0.95661 0.93288 0.91480 1.21704 0.98280 0.92580 1.02504 1.21424 0.97576 1.01062 0.94899 1.21901 0.86369 0.92695 0.94500 0.91069 1.86482 1.40467 1.72678 1.40095 1.22165 0.97472 0.97142 1.01450 1.21779 0.98249 0.99594 0.96359 1.21512 0.90862 0.98510 0.96838 1.21518 0.98615 0.97306 0.98079 1.21639 0.98363 0.92925 0.95870 1.21387 0.92725 1.01895 1.01202 1.21729 0.97717 0.92745 1.08578 1.22292 0.90873 0.92183 1.08343 1.24933 0.93559 0.91676 1.05402 1.86576 1.29334 1.88497 1.30048 0.93229 0.83724 0.74764 0.79293 0.88260 0.85935 0.88410 0.72964 0.74544 0.89474 0.88765 0.92308 0.90109 0.75671 0.92563 0.90551 0.89974 0.93690 0.81774 0.81724 0.82800 0.85065 0.79407 0.83390 0.76244 1.20695 1.22316 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 -0.21 10.12 127.77 1.29 1.08 16 2 N -0.26 -1.20 3.70 -355.94 -1.32 -2.51 16 3 N -0.27 -2.83 11.68 -48.19 -0.56 -3.40 16 4 C -0.04 -0.52 7.13 42.44 0.30 -0.21 16 5 C 0.60 8.46 7.66 86.73 0.66 9.12 16 6 O -0.54 -8.87 14.38 -3.93 -0.06 -8.93 16 7 N -0.65 -8.13 4.67 -305.69 -1.43 -9.56 16 8 C 0.18 1.75 6.30 38.62 0.24 2.00 16 9 C -0.19 -0.93 5.89 -19.98 -0.12 -1.05 16 10 C 0.56 3.58 7.72 86.69 0.67 4.25 16 11 O -0.57 -7.75 13.56 -4.01 -0.05 -7.80 16 12 N -0.70 0.84 5.03 -445.74 -2.24 -1.40 16 13 C 0.15 -0.05 2.45 44.99 0.11 0.06 16 14 H 0.07 0.36 7.58 -2.39 -0.02 0.34 16 15 C -0.11 0.60 5.39 30.60 0.16 0.77 16 16 C -0.11 0.20 5.57 30.59 0.17 0.37 16 17 C 0.10 -0.15 3.47 30.60 0.11 -0.05 16 18 H 0.07 -0.30 8.14 -2.38 -0.02 -0.32 16 19 O -0.59 -0.88 13.32 -148.98 -1.98 -2.86 16 20 C -0.14 0.06 5.54 30.58 0.17 0.23 16 21 C -0.12 -0.04 5.49 30.58 0.17 0.13 16 22 C -0.06 0.15 9.52 22.52 0.21 0.37 16 23 C -0.14 0.46 10.02 22.24 0.22 0.68 16 24 C -0.07 -0.05 10.03 22.30 0.22 0.18 16 25 C -0.15 -1.15 8.67 22.37 0.19 -0.96 16 26 C -0.18 -1.06 9.35 22.41 0.21 -0.85 16 27 C -0.01 -0.03 6.18 41.40 0.26 0.23 16 28 C -0.05 0.14 2.88 71.23 0.20 0.35 16 29 O -0.54 1.63 10.40 -148.98 -1.55 0.08 16 30 Si 0.79 -2.12 31.22 68.60 2.14 0.02 16 31 H 0.10 -0.55 8.14 -2.39 -0.02 -0.57 16 32 H 0.12 -0.67 6.77 -2.39 -0.02 -0.69 16 33 H 0.10 -0.30 8.14 -2.39 -0.02 -0.32 16 34 H 0.43 5.84 6.06 -92.71 -0.56 5.28 16 35 H 0.42 -3.33 6.66 -92.71 -0.62 -3.94 16 36 H 0.09 -0.56 8.14 -2.39 -0.02 -0.58 16 37 H 0.09 -0.86 8.14 -2.39 -0.02 -0.88 16 38 H 0.06 0.08 8.14 -2.39 -0.02 0.06 16 39 H 0.08 -0.17 8.14 -2.39 -0.02 -0.19 16 40 H 0.39 -2.40 9.08 -74.05 -0.67 -3.08 16 41 H 0.06 0.18 8.14 -2.39 -0.02 0.17 16 42 H 0.08 -0.16 8.14 -2.39 -0.02 -0.18 16 43 H 0.08 -0.22 8.14 -2.39 -0.02 -0.24 16 44 H 0.04 0.28 8.14 -2.39 -0.02 0.26 16 45 H 0.16 -1.73 6.43 -2.91 -0.02 -1.75 16 46 H 0.17 -1.62 8.06 -2.91 -0.02 -1.65 16 47 H 0.15 -0.65 8.06 -2.91 -0.02 -0.67 16 48 H 0.13 1.35 6.25 -2.91 -0.02 1.34 16 49 H 0.19 0.23 7.01 -2.91 -0.02 0.20 16 50 H 0.15 -0.95 7.96 -2.39 -0.02 -0.96 16 51 H 0.39 -2.74 8.70 -74.06 -0.64 -3.38 16 52 H -0.28 -0.74 7.11 99.48 0.71 -0.03 16 53 H -0.30 -1.23 7.11 99.48 0.71 -0.52 16 Total: 0.00 -28.96 429.73 -3.03 -32.00 By element: Atomic # 1 Polarization: -10.86 SS G_CDS: -1.45 Total: -12.31 kcal Atomic # 6 Polarization: 11.21 SS G_CDS: 5.47 Total: 16.68 kcal Atomic # 7 Polarization: -11.33 SS G_CDS: -5.55 Total: -16.88 kcal Atomic # 8 Polarization: -15.86 SS G_CDS: -3.64 Total: -19.51 kcal Atomic # 14 Polarization: -2.12 SS G_CDS: 2.14 Total: 0.02 kcal Total: -28.96 -3.03 -32.00 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_11560734_13259642.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -7.987 kcal (2) G-P(sol) polarization free energy of solvation -28.961 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -36.948 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.034 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.995 kcal (6) G-S(sol) free energy of system = (1) + (5) -39.982 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.87 seconds