Wall clock time and date at job start Thu Mar 4 2021 13:16:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 C 1.52999 * 109.47269 * 2 1 4 4 C 1.52997 * 109.47232 * 239.99603 * 2 1 3 5 5 O 1.42905 * 109.46921 * 119.99485 * 2 1 3 6 6 C 1.42899 * 113.99778 * 60.00172 * 5 2 1 7 7 H 1.08997 * 112.85028 * 339.66516 * 6 5 2 8 8 C 1.53785 * 113.61436 * 110.86285 * 6 5 2 9 9 C 1.53953 * 87.01959 * 139.94974 * 8 6 5 10 10 H 1.09003 * 113.61402 * 89.19854 * 9 8 6 11 11 N 1.46502 * 113.66805 * 220.06796 * 9 8 6 12 12 C 1.34777 * 119.99461 * 252.55914 * 11 9 8 13 13 O 1.21586 * 120.00489 * 0.02562 * 12 11 9 14 14 C 1.47582 * 119.99488 * 179.97438 * 12 11 9 15 15 C 1.36493 * 120.01108 * 179.73134 * 14 12 11 16 16 N 1.35942 * 120.50643 * 179.71694 * 15 14 12 17 17 C 1.36998 * 132.41142 * 180.22308 * 16 15 14 18 18 C 1.50700 * 126.43110 * 0.27679 * 17 16 15 19 19 O 1.42903 * 109.46804 * 30.00152 * 18 17 16 20 20 Si 1.86294 * 109.47308 * 150.00302 * 18 17 16 21 21 C 1.35010 * 107.14392 * 180.30122 * 17 16 15 22 22 N 1.33582 * 108.65540 * 359.97438 * 21 17 16 23 23 C 1.32418 * 109.22181 * 0.02562 * 22 21 17 24 24 C 1.41254 * 132.12021 * 180.02562 * 23 22 21 25 25 Br 1.89103 * 120.25442 * 359.97438 * 24 23 22 26 26 C 1.35697 * 119.49183 * 179.97438 * 24 23 22 27 27 C 1.53783 * 87.11313 * 334.63561 * 9 8 6 28 28 H 1.09000 * 109.47140 * 300.00547 * 1 2 3 29 29 H 1.09001 * 109.47230 * 59.99691 * 1 2 3 30 30 H 1.09001 * 109.47375 * 180.02562 * 1 2 3 31 31 H 1.09001 * 109.47362 * 180.02562 * 3 2 1 32 32 H 1.09002 * 109.46716 * 299.99747 * 3 2 1 33 33 H 1.09000 * 109.47486 * 59.99665 * 3 2 1 34 34 H 1.09001 * 109.46832 * 300.00199 * 4 2 1 35 35 H 1.09002 * 109.47153 * 60.00008 * 4 2 1 36 36 H 1.08996 * 109.46952 * 180.02562 * 4 2 1 37 37 H 1.09000 * 113.61294 * 254.52421 * 8 6 5 38 38 H 1.08997 * 113.61578 * 25.43109 * 8 6 5 39 39 H 0.96997 * 119.99837 * 72.55465 * 11 9 8 40 40 H 1.08008 * 119.74438 * 359.97438 * 15 14 12 41 41 H 1.09004 * 109.47321 * 270.00528 * 18 17 16 42 42 H 0.96701 * 114.00058 * 59.99934 * 19 18 17 43 43 H 1.48499 * 110.00185 * 58.68371 * 20 18 17 44 44 H 1.48497 * 109.99997 * 180.02562 * 20 18 17 45 45 H 1.08002 * 125.67461 * 180.02562 * 21 17 16 46 46 H 1.07996 * 120.23633 * 180.02562 * 26 24 23 47 47 H 1.09000 * 113.61637 * 270.81205 * 27 9 8 48 48 H 1.09005 * 113.69142 * 139.91501 * 27 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7213 -1.2492 5 8 2.0063 -0.6736 1.1669 6 6 1.5846 -2.0354 1.2647 7 1 0.7074 -2.2517 0.6550 8 6 2.7269 -3.0486 1.0818 9 6 2.0773 -3.8640 2.2146 10 1 1.3352 -4.5821 1.8656 11 7 3.0441 -4.4520 3.1451 12 6 3.2763 -5.7795 3.1258 13 8 2.6839 -6.4890 2.3360 14 6 4.2507 -6.3717 4.0628 15 6 4.4821 -7.7167 4.0473 16 7 5.3816 -8.2721 4.9020 17 6 5.8005 -9.5625 5.0923 18 6 5.3305 -10.7770 4.3339 19 8 4.9605 -10.3964 3.0072 20 14 6.7046 -12.0328 4.2593 21 6 6.7131 -9.5421 6.0870 22 7 6.8612 -8.2821 6.5052 23 6 6.0639 -7.4927 5.8019 24 6 5.8368 -6.0991 5.8398 25 35 6.7716 -5.0147 7.0752 26 6 4.9427 -5.5444 4.9829 27 6 1.4691 -2.5421 2.7120 28 1 -0.3633 0.5139 0.8899 29 1 -0.3634 0.5139 -0.8900 30 1 -0.3634 -1.0277 0.0005 31 1 3.1300 1.4425 -0.0005 32 1 1.6767 1.9562 -0.8900 33 1 1.6767 1.9564 0.8899 34 1 1.6766 -1.7490 -1.2491 35 1 1.6767 -0.2075 -2.1392 36 1 3.1300 -0.7217 -1.2489 37 1 2.7125 -3.5533 0.1157 38 1 3.7088 -2.6507 1.3380 39 1 3.5171 -3.8859 3.7749 40 1 3.9495 -8.3441 3.3478 41 1 4.4688 -11.2111 4.8410 42 1 5.6803 -10.0017 2.4960 43 1 7.1202 -12.4132 5.6333 44 1 6.2539 -13.2351 3.5134 45 1 7.2370 -10.4014 6.4789 46 1 4.7601 -4.4802 5.0012 47 1 2.1064 -2.0053 3.4148 48 1 0.4406 -2.6369 3.0606 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_11572880_12335884.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:16:06 Heat of formation + Delta-G solvation = 16.991765 kcal Electronic energy + Delta-G solvation = -32307.120209 eV Core-core repulsion = 27798.785061 eV Total energy + Delta-G solvation = -4508.335148 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 424.083 amu Computer time = 1.23 seconds Orbital eigenvalues (eV) -44.29193 -41.54715 -40.46235 -38.67963 -38.19981 -37.91604 -35.45808 -34.75644 -33.53721 -32.40627 -31.78522 -30.27141 -28.43595 -28.33865 -26.93511 -26.64902 -26.42582 -24.45084 -24.10862 -22.59237 -21.94095 -21.25305 -20.71077 -19.51876 -18.66086 -18.21421 -18.01303 -17.67814 -17.47955 -17.04251 -16.54788 -16.28686 -16.11605 -15.92240 -15.78624 -15.71880 -15.40420 -15.24030 -14.88514 -14.68966 -14.41848 -14.14221 -14.05869 -13.50066 -13.44141 -13.37716 -13.27734 -13.14730 -13.01924 -12.84642 -12.70267 -12.66573 -12.62132 -12.30319 -12.15744 -12.09580 -11.75147 -11.56035 -11.39631 -11.36085 -11.30478 -11.19829 -10.90316 -10.40381 -10.23747 -10.01757 -9.10859 -4.95774 -0.91982 -0.39699 0.18159 0.95492 1.09415 1.39857 1.65482 1.76743 1.89177 1.99766 2.20661 2.77222 2.78435 3.06923 3.17347 3.35320 3.43366 3.46136 3.48511 3.55144 3.79635 3.82832 3.88949 3.92845 3.99771 4.09674 4.12520 4.22949 4.31727 4.32931 4.41566 4.48193 4.64023 4.65202 4.70371 4.76134 4.80914 4.84316 4.92905 4.93796 4.94068 5.00390 5.03281 5.04539 5.18636 5.24708 5.34905 5.36649 5.43326 5.55054 6.29416 6.40937 6.41290 6.49553 6.94846 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.178 4.178 2 C 0.100 3.900 3 C -0.139 4.139 4 C -0.174 4.174 5 O -0.375 6.375 6 C 0.062 3.938 7 H 0.101 0.899 8 C -0.164 4.164 9 C 0.124 3.876 10 H 0.111 0.889 11 N -0.695 5.695 12 C 0.581 3.419 13 O -0.563 6.563 14 C -0.169 4.169 15 C 0.162 3.838 16 N -0.356 5.356 17 C -0.080 4.080 18 C -0.044 4.044 19 O -0.553 6.553 20 Si 0.804 3.196 21 C 0.035 3.965 22 N -0.493 5.493 23 C 0.227 3.773 24 C -0.080 4.080 25 Br 0.005 6.995 26 C -0.024 4.024 27 C -0.134 4.134 28 H 0.061 0.939 29 H 0.075 0.925 30 H 0.063 0.937 31 H 0.058 0.942 32 H 0.082 0.918 33 H 0.059 0.941 34 H 0.060 0.940 35 H 0.073 0.927 36 H 0.057 0.943 37 H 0.071 0.929 38 H 0.093 0.907 39 H 0.416 0.584 40 H 0.195 0.805 41 H 0.120 0.880 42 H 0.396 0.604 43 H -0.266 1.266 44 H -0.287 1.287 45 H 0.208 0.792 46 H 0.184 0.816 47 H 0.103 0.897 48 H 0.090 0.910 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.302 2.983 -3.295 4.455 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.235 4.235 2 C 0.061 3.939 3 C -0.197 4.197 4 C -0.232 4.232 5 O -0.294 6.294 6 C 0.004 3.996 7 H 0.118 0.882 8 C -0.203 4.203 9 C 0.019 3.981 10 H 0.129 0.871 11 N -0.346 5.346 12 C 0.367 3.633 13 O -0.443 6.443 14 C -0.176 4.176 15 C 0.036 3.964 16 N -0.029 5.029 17 C -0.191 4.191 18 C -0.153 4.153 19 O -0.360 6.360 20 Si 0.705 3.295 21 C -0.114 4.114 22 N -0.212 5.212 23 C -0.018 4.018 24 C -0.163 4.163 25 Br 0.090 6.910 26 C -0.049 4.049 27 C -0.172 4.172 28 H 0.080 0.920 29 H 0.094 0.906 30 H 0.082 0.918 31 H 0.077 0.923 32 H 0.100 0.900 33 H 0.078 0.922 34 H 0.079 0.921 35 H 0.092 0.908 36 H 0.077 0.923 37 H 0.090 0.910 38 H 0.111 0.889 39 H 0.254 0.746 40 H 0.211 0.789 41 H 0.138 0.862 42 H 0.246 0.754 43 H -0.192 1.192 44 H -0.213 1.213 45 H 0.225 0.775 46 H 0.201 0.799 47 H 0.122 0.878 48 H 0.108 0.892 Dipole moment (debyes) X Y Z Total from point charges -0.030 2.138 -2.224 3.085 hybrid contribution -1.183 -0.169 -0.354 1.246 sum -1.213 1.968 -2.579 3.463 Atomic orbital electron populations 1.22458 0.95018 1.02796 1.03256 1.21653 0.93631 0.93289 0.85322 1.21789 1.01672 0.93209 1.02982 1.22449 1.01851 1.00938 0.97936 1.88005 1.74144 1.23766 1.43510 1.23428 0.97119 0.81435 0.97660 0.88172 1.24041 1.00180 0.96809 0.99240 1.22291 0.91642 0.93738 0.90380 0.87067 1.45662 1.43291 1.06715 1.38919 1.17573 0.80903 0.82824 0.81995 1.90842 1.51191 1.61535 1.40757 1.19249 1.03690 0.92493 1.02205 1.22256 0.88251 0.94898 0.91045 1.42706 1.27186 1.08391 1.24618 1.22365 1.05354 0.84650 1.06773 1.25176 1.10259 0.96869 0.82974 1.86484 1.42396 1.83656 1.23506 0.93057 0.80566 0.74379 0.81489 1.22854 0.97866 0.95540 0.95152 1.70828 1.22198 1.02243 1.25934 1.20693 0.96017 0.92932 0.92192 1.20556 1.03703 0.89613 1.02404 1.96844 1.74803 1.62852 1.56486 1.21351 0.91157 1.01982 0.90448 1.23577 1.03048 0.93652 0.96953 0.92032 0.90614 0.91792 0.92307 0.89964 0.92166 0.92123 0.90776 0.92343 0.91013 0.88871 0.74587 0.78858 0.86246 0.75421 1.19203 1.21337 0.77528 0.79908 0.87821 0.89189 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.58 8.38 71.98 0.60 1.18 16 2 C 0.10 -0.15 1.12 -10.80 -0.01 -0.17 16 3 C -0.14 0.28 8.84 71.98 0.64 0.92 16 4 C -0.17 0.45 8.36 71.98 0.60 1.05 16 5 O -0.37 -0.24 10.00 -148.98 -1.49 -1.73 16 6 C 0.06 -0.19 2.80 31.12 0.09 -0.10 16 7 H 0.10 -0.43 5.59 -2.39 -0.01 -0.44 16 8 C -0.16 0.46 7.64 31.18 0.24 0.70 16 9 C 0.12 -0.41 4.24 45.58 0.19 -0.21 16 10 H 0.11 -0.06 7.46 -2.39 -0.02 -0.08 16 11 N -0.69 2.81 5.31 -442.86 -2.35 0.46 16 12 C 0.58 0.72 7.76 86.71 0.67 1.39 16 13 O -0.56 -4.78 15.87 -3.99 -0.06 -4.84 16 14 C -0.17 0.04 5.84 -20.35 -0.12 -0.08 16 15 C 0.16 0.25 9.91 83.65 0.83 1.08 16 16 N -0.36 -1.13 2.93 -337.70 -0.99 -2.12 16 17 C -0.08 -0.08 6.24 41.01 0.26 0.17 16 18 C -0.04 0.12 3.06 71.24 0.22 0.34 16 19 O -0.55 1.25 10.91 -148.98 -1.63 -0.37 16 20 Si 0.80 -4.34 31.34 68.60 2.15 -2.19 16 21 C 0.04 0.10 10.44 83.68 0.87 0.97 16 22 N -0.49 -4.02 11.30 -194.10 -2.19 -6.22 16 23 C 0.23 1.39 7.59 134.18 1.02 2.41 16 24 C -0.08 -0.21 6.24 22.42 0.14 -0.07 16 25 Br 0.00 0.01 33.72 -20.37 -0.69 -0.67 16 26 C -0.02 0.06 9.26 22.55 0.21 0.27 16 27 C -0.13 0.71 7.67 31.12 0.24 0.94 16 28 H 0.06 -0.13 8.14 -2.39 -0.02 -0.15 16 29 H 0.07 -0.35 8.14 -2.39 -0.02 -0.37 16 30 H 0.06 -0.26 6.23 -2.39 -0.01 -0.28 16 31 H 0.06 -0.06 8.14 -2.39 -0.02 -0.08 16 32 H 0.08 -0.37 8.14 -2.39 -0.02 -0.39 16 33 H 0.06 -0.07 8.14 -2.39 -0.02 -0.09 16 34 H 0.06 -0.17 7.01 -2.39 -0.02 -0.19 16 35 H 0.07 -0.30 8.14 -2.39 -0.02 -0.32 16 36 H 0.06 -0.07 8.14 -2.39 -0.02 -0.09 16 37 H 0.07 -0.12 8.14 -2.39 -0.02 -0.14 16 38 H 0.09 -0.21 8.14 -2.39 -0.02 -0.23 16 39 H 0.42 -3.86 6.76 -92.71 -0.63 -4.49 16 40 H 0.19 0.31 6.20 -2.91 -0.02 0.29 16 41 H 0.12 -0.26 7.96 -2.38 -0.02 -0.28 16 42 H 0.40 -3.57 8.70 -74.06 -0.64 -4.21 16 43 H -0.27 0.61 6.80 99.48 0.68 1.29 16 44 H -0.29 -0.40 7.11 99.48 0.71 0.31 16 45 H 0.21 -0.49 6.70 -2.91 -0.02 -0.51 16 46 H 0.18 -1.71 6.44 -2.91 -0.02 -1.73 16 47 H 0.10 -0.64 8.12 -2.39 -0.02 -0.66 16 48 H 0.09 -0.56 8.14 -2.38 -0.02 -0.58 16 Total: 0.00 -19.50 409.27 -0.81 -20.31 By element: Atomic # 1 Polarization: -13.18 SS G_CDS: -0.24 Total: -13.42 kcal Atomic # 6 Polarization: 4.11 SS G_CDS: 6.68 Total: 10.79 kcal Atomic # 7 Polarization: -2.34 SS G_CDS: -5.54 Total: -7.87 kcal Atomic # 8 Polarization: -3.77 SS G_CDS: -3.18 Total: -6.94 kcal Atomic # 14 Polarization: -4.34 SS G_CDS: 2.15 Total: -2.19 kcal Atomic # 35 Polarization: 0.01 SS G_CDS: -0.69 Total: -0.67 kcal Total: -19.50 -0.81 -20.31 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_11572880_12335884.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 37.298 kcal (2) G-P(sol) polarization free energy of solvation -19.500 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 17.798 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.806 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.306 kcal (6) G-S(sol) free energy of system = (1) + (5) 16.992 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.23 seconds