Wall clock time and date at job start Thu Mar 4 2021 13:16:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46500 * 1 3 3 N 1.28472 * 124.88099 * 2 1 4 4 C 1.31811 * 110.07116 * 179.73494 * 3 2 1 5 5 C 1.47705 * 126.52246 * 180.31191 * 4 3 2 6 6 O 1.21564 * 120.00576 * 180.15503 * 5 4 3 7 7 N 1.34783 * 119.99706 * 0.15683 * 5 4 3 8 8 C 1.46500 * 120.00007 * 179.97438 * 7 5 4 9 9 H 1.09005 * 112.84803 * 23.80480 * 8 7 5 10 10 C 1.53780 * 113.61542 * 155.00040 * 8 7 5 11 11 C 1.53778 * 87.07898 * 139.98136 * 10 8 7 12 12 H 1.09002 * 113.61557 * 89.11989 * 11 10 8 13 13 O 1.42910 * 113.61255 * 219.93381 * 11 10 8 14 14 C 1.42903 * 113.99782 * 210.00330 * 13 11 10 15 15 C 1.52996 * 109.47183 * 60.00191 * 14 13 11 16 16 C 1.53004 * 109.46768 * 180.02562 * 14 13 11 17 17 C 1.53005 * 109.47225 * 299.99873 * 14 13 11 18 18 C 1.53779 * 87.08639 * 334.56753 * 11 10 8 19 19 C 1.41504 * 106.96249 * 0.44760 * 4 3 2 20 20 C 1.35032 * 124.88635 * 180.02562 * 2 1 3 21 21 C 1.50700 * 126.38494 * 359.97438 * 20 2 1 22 22 O 1.42903 * 109.46954 * 330.00115 * 21 20 2 23 23 Si 1.86305 * 109.47136 * 210.00608 * 21 20 2 24 24 H 1.09008 * 109.47135 * 269.97496 * 1 2 3 25 25 H 1.08999 * 109.47557 * 29.97548 * 1 2 3 26 26 H 1.08998 * 109.47479 * 149.97670 * 1 2 3 27 27 H 0.97003 * 120.00212 * 0.02562 * 7 5 4 28 28 H 1.08993 * 113.61439 * 254.53037 * 10 8 7 29 29 H 1.08999 * 113.61255 * 25.35248 * 10 8 7 30 30 H 1.08999 * 109.47332 * 59.99425 * 15 14 13 31 31 H 1.08997 * 109.47116 * 180.02562 * 15 14 13 32 32 H 1.09003 * 109.46967 * 299.99543 * 15 14 13 33 33 H 1.08999 * 109.46954 * 60.00216 * 16 14 13 34 34 H 1.08997 * 109.46770 * 179.97438 * 16 14 13 35 35 H 1.08999 * 109.46735 * 299.99955 * 16 14 13 36 36 H 1.08999 * 109.46561 * 60.00192 * 17 14 13 37 37 H 1.08995 * 109.46947 * 180.02562 * 17 14 13 38 38 H 1.08996 * 109.46866 * 300.00480 * 17 14 13 39 39 H 1.09002 * 113.61540 * 270.88618 * 18 11 10 40 40 H 1.08997 * 113.61398 * 139.97825 * 18 11 10 41 41 H 1.08002 * 127.25153 * 179.83669 * 19 4 3 42 42 H 1.08996 * 109.47135 * 90.00494 * 21 20 2 43 43 H 0.96700 * 113.99638 * 179.97438 * 22 21 20 44 44 H 1.48504 * 109.99607 * 298.68067 * 23 21 20 45 45 H 1.48494 * 109.99880 * 59.99567 * 23 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.1997 1.0539 0.0000 4 6 3.4740 0.7170 0.0057 5 6 4.6272 1.6399 0.0141 6 8 5.7596 1.1978 0.0160 7 7 4.4240 2.9723 0.0198 8 6 5.5678 3.8877 0.0286 9 1 6.4741 3.4365 -0.3754 10 6 5.2531 5.2725 -0.5614 11 6 6.1122 5.8624 0.5694 12 1 7.1682 5.9519 0.3142 13 8 5.5738 7.0608 1.1317 14 6 6.5621 7.9612 1.6364 15 6 7.5003 8.3769 0.5016 16 6 5.8756 9.2017 2.2116 17 6 7.3684 7.2686 2.7370 18 6 5.7787 4.5969 1.3768 19 6 3.5272 -0.6970 -0.0009 20 6 2.2373 -1.1076 -0.0005 21 6 1.7534 -2.5348 -0.0006 22 8 0.4957 -2.6114 0.6735 23 14 2.9949 -3.6116 0.8772 24 1 -0.3634 -0.0004 1.0277 25 1 -0.3634 0.8902 -0.5134 26 1 -0.3634 -0.8897 -0.5142 27 1 3.5204 3.3251 0.0187 28 1 5.6721 5.4290 -1.5553 29 1 4.1995 5.5447 -0.4985 30 1 6.9259 8.8702 -0.2825 31 1 8.2544 9.0632 0.8867 32 1 7.9894 7.4929 0.0923 33 1 5.2075 8.9052 3.0201 34 1 6.6295 9.8882 2.5969 35 1 5.3010 9.6951 1.4278 36 1 7.8574 6.3847 2.3276 37 1 8.1219 7.9555 3.1222 38 1 6.7000 6.9725 3.5454 39 1 4.8690 4.6851 1.9708 40 1 6.6221 4.2082 1.9474 41 1 4.4108 -1.3180 -0.0013 42 1 1.6365 -2.8788 -1.0282 43 1 0.1234 -3.5031 0.7113 44 1 4.2986 -3.5655 0.1676 45 1 3.1634 -3.1529 2.2794 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_11572880_13259642.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:16:11 Heat of formation + Delta-G solvation = -7.877401 kcal Electronic energy + Delta-G solvation = -25868.211353 eV Core-core repulsion = 22083.294221 eV Total energy + Delta-G solvation = -3784.917132 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 310.173 amu Computer time = 0.93 seconds Orbital eigenvalues (eV) -43.98410 -41.38214 -40.19970 -38.29930 -37.89465 -34.95873 -34.45122 -33.49695 -32.75285 -28.81335 -28.41266 -28.37948 -26.90514 -26.74231 -25.69089 -23.82598 -22.32073 -21.35247 -21.12726 -20.50390 -18.63660 -18.38861 -18.05060 -17.66808 -17.50842 -17.16278 -16.39926 -16.16623 -15.87525 -15.73164 -15.45197 -15.30435 -15.10351 -14.74720 -14.46551 -14.20300 -13.98258 -13.73949 -13.56502 -13.46768 -13.33511 -13.16483 -13.02200 -12.89242 -12.71426 -12.68495 -12.40451 -12.23552 -12.13881 -12.10165 -11.81507 -11.49900 -11.28739 -10.95654 -10.48358 -10.40740 -10.13532 -9.96023 -5.03333 0.26830 0.64434 1.17188 1.50693 1.66509 1.92630 2.04085 2.10428 2.72728 3.01812 3.11818 3.37716 3.47048 3.51139 3.72810 3.78701 3.87583 3.90752 3.94532 4.07532 4.20910 4.23455 4.29326 4.34683 4.41001 4.46850 4.57900 4.60036 4.64271 4.66096 4.68002 4.76291 4.77345 4.86077 4.87200 4.93198 4.95745 4.99097 5.01634 5.14072 5.30560 5.31966 5.37356 5.55589 6.22470 6.34931 6.65371 6.82825 6.93982 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.086 3.914 2 N -0.257 5.257 3 N -0.261 5.261 4 C -0.037 4.037 5 C 0.605 3.395 6 O -0.569 6.569 7 N -0.692 5.692 8 C 0.118 3.882 9 H 0.112 0.888 10 C -0.132 4.132 11 C 0.069 3.931 12 H 0.106 0.894 13 O -0.376 6.376 14 C 0.098 3.902 15 C -0.177 4.177 16 C -0.139 4.139 17 C -0.175 4.175 18 C -0.165 4.165 19 C -0.217 4.217 20 C 0.030 3.970 21 C -0.043 4.043 22 O -0.558 6.558 23 Si 0.811 3.189 24 H 0.094 0.906 25 H 0.103 0.897 26 H 0.125 0.875 27 H 0.416 0.584 28 H 0.093 0.907 29 H 0.098 0.902 30 H 0.062 0.938 31 H 0.078 0.922 32 H 0.063 0.937 33 H 0.056 0.944 34 H 0.084 0.916 35 H 0.060 0.940 36 H 0.059 0.941 37 H 0.077 0.923 38 H 0.055 0.945 39 H 0.086 0.914 40 H 0.071 0.929 41 H 0.156 0.844 42 H 0.120 0.880 43 H 0.416 0.584 44 H -0.293 1.293 45 H -0.312 1.312 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.543 -3.015 -1.541 6.495 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.053 4.053 2 N -0.046 5.046 3 N -0.099 5.099 4 C -0.195 4.195 5 C 0.391 3.609 6 O -0.447 6.447 7 N -0.342 5.342 8 C 0.014 3.986 9 H 0.130 0.870 10 C -0.170 4.170 11 C 0.011 3.989 12 H 0.123 0.877 13 O -0.295 6.295 14 C 0.059 3.941 15 C -0.235 4.235 16 C -0.196 4.196 17 C -0.233 4.233 18 C -0.204 4.204 19 C -0.245 4.245 20 C -0.096 4.096 21 C -0.154 4.154 22 O -0.370 6.370 23 Si 0.717 3.283 24 H 0.112 0.888 25 H 0.121 0.879 26 H 0.144 0.856 27 H 0.253 0.747 28 H 0.112 0.888 29 H 0.117 0.883 30 H 0.081 0.919 31 H 0.097 0.903 32 H 0.082 0.918 33 H 0.075 0.925 34 H 0.103 0.897 35 H 0.079 0.921 36 H 0.078 0.922 37 H 0.096 0.904 38 H 0.074 0.926 39 H 0.105 0.895 40 H 0.090 0.910 41 H 0.173 0.827 42 H 0.137 0.863 43 H 0.269 0.731 44 H -0.221 1.221 45 H -0.241 1.241 Dipole moment (debyes) X Y Z Total from point charges -4.961 -1.739 -1.068 5.364 hybrid contribution 0.494 0.018 -0.013 0.495 sum -4.466 -1.722 -1.081 4.907 Atomic orbital electron populations 1.22607 0.69894 1.06865 1.05890 1.45807 1.09430 1.01536 1.47866 1.73462 1.02393 1.14762 1.19321 1.21763 0.91257 0.93937 1.12580 1.17034 0.86223 0.82306 0.75383 1.90768 1.23867 1.77839 1.52178 1.45702 1.10965 1.04383 1.73175 1.22339 0.90142 0.88292 0.97846 0.87041 1.23557 1.02343 0.92009 0.99125 1.23365 0.98472 0.83330 0.93752 0.87659 1.88012 1.33733 1.29789 1.78014 1.21706 0.88868 0.90147 0.93366 1.22454 0.99947 1.02426 0.98632 1.21791 1.01286 0.95455 1.01059 1.22460 1.00590 1.01316 0.98897 1.24000 1.02835 0.96233 0.97310 1.21529 0.97134 0.94148 1.11722 1.21466 0.90265 0.91320 1.06560 1.24381 0.95406 0.91558 1.04043 1.86354 1.33824 1.37843 1.78949 0.94613 0.75388 0.83626 0.74656 0.88785 0.87877 0.85644 0.74730 0.88799 0.88339 0.91913 0.90346 0.91837 0.92470 0.89676 0.92073 0.92238 0.90431 0.92570 0.89523 0.90985 0.82684 0.86292 0.73061 1.22082 1.24071 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.09 -0.32 10.12 127.77 1.29 0.97 16 2 N -0.26 -1.30 3.70 -355.92 -1.32 -2.61 16 3 N -0.26 -2.39 11.67 -48.18 -0.56 -2.96 16 4 C -0.04 -0.47 7.13 42.46 0.30 -0.16 16 5 C 0.61 8.20 7.82 86.74 0.68 8.88 16 6 O -0.57 -11.25 16.52 -3.92 -0.06 -11.31 16 7 N -0.69 -4.86 5.35 -443.03 -2.37 -7.24 16 8 C 0.12 0.54 4.24 45.52 0.19 0.73 16 9 H 0.11 0.74 7.46 -2.38 -0.02 0.72 16 10 C -0.13 -0.11 7.66 31.12 0.24 0.13 16 11 C 0.07 0.13 2.82 31.12 0.09 0.22 16 12 H 0.11 -0.04 5.54 -2.39 -0.01 -0.05 16 13 O -0.38 -1.79 10.00 -148.98 -1.49 -3.28 16 14 C 0.10 0.14 1.11 -10.79 -0.01 0.13 16 15 C -0.18 0.17 8.38 71.98 0.60 0.77 16 16 C -0.14 -0.05 8.84 71.98 0.64 0.59 16 17 C -0.18 -0.08 8.38 71.98 0.60 0.52 16 18 C -0.16 -0.65 7.71 31.12 0.24 -0.41 16 19 C -0.22 -2.39 9.35 22.41 0.21 -2.18 16 20 C 0.03 0.16 6.21 41.40 0.26 0.41 16 21 C -0.04 0.19 2.87 71.24 0.20 0.39 16 22 O -0.56 4.47 10.38 -148.98 -1.55 2.92 16 23 Si 0.81 -2.43 31.31 68.60 2.15 -0.28 16 24 H 0.09 -0.42 8.14 -2.38 -0.02 -0.44 16 25 H 0.10 -0.61 8.14 -2.39 -0.02 -0.63 16 26 H 0.13 -0.98 6.77 -2.39 -0.02 -0.99 16 27 H 0.42 1.65 8.45 -92.71 -0.78 0.87 16 28 H 0.09 -0.12 8.14 -2.39 -0.02 -0.14 16 29 H 0.10 0.08 8.12 -2.39 -0.02 0.06 16 30 H 0.06 -0.01 8.14 -2.39 -0.02 -0.02 16 31 H 0.08 -0.23 8.14 -2.39 -0.02 -0.25 16 32 H 0.06 -0.10 6.24 -2.39 -0.01 -0.12 16 33 H 0.06 0.10 8.14 -2.39 -0.02 0.08 16 34 H 0.08 -0.22 8.14 -2.39 -0.02 -0.24 16 35 H 0.06 0.06 8.14 -2.39 -0.02 0.04 16 36 H 0.06 0.03 7.02 -2.39 -0.02 0.01 16 37 H 0.08 -0.14 8.14 -2.39 -0.02 -0.16 16 38 H 0.06 0.13 8.14 -2.39 -0.02 0.11 16 39 H 0.09 0.48 8.14 -2.39 -0.02 0.46 16 40 H 0.07 0.33 8.14 -2.39 -0.02 0.31 16 41 H 0.16 1.78 6.91 -2.91 -0.02 1.76 16 42 H 0.12 -1.18 7.96 -2.39 -0.02 -1.19 16 43 H 0.42 -7.78 8.74 -74.06 -0.65 -8.43 16 44 H -0.29 -1.20 6.94 99.48 0.69 -0.51 16 45 H -0.31 -2.26 7.11 99.48 0.71 -1.55 16 Total: 0.00 -24.04 366.57 -0.07 -24.11 By element: Atomic # 1 Polarization: -9.94 SS G_CDS: -0.40 Total: -10.34 kcal Atomic # 6 Polarization: 5.45 SS G_CDS: 5.54 Total: 10.99 kcal Atomic # 7 Polarization: -8.56 SS G_CDS: -4.25 Total: -12.81 kcal Atomic # 8 Polarization: -8.57 SS G_CDS: -3.10 Total: -11.67 kcal Atomic # 14 Polarization: -2.43 SS G_CDS: 2.15 Total: -0.28 kcal Total: -24.04 -0.07 -24.11 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_11572880_13259642.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 16.236 kcal (2) G-P(sol) polarization free energy of solvation -24.044 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -7.808 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.070 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.113 kcal (6) G-S(sol) free energy of system = (1) + (5) -7.877 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.93 seconds