Wall clock time and date at job start Thu Mar 4 2021 14:06:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86302 * 109.46817 * 2 1 4 4 C 1.50703 * 109.47337 * 240.00240 * 2 1 3 5 5 C 1.35003 * 126.43114 * 149.99176 * 4 2 1 6 6 N 1.33585 * 108.65383 * 180.02562 * 5 4 2 7 7 C 1.32412 * 109.22563 * 0.02562 * 6 5 4 8 8 C 1.41244 * 132.11803 * 180.02562 * 7 6 5 9 9 Br 1.89101 * 120.25759 * 359.97438 * 8 7 6 10 10 C 1.35706 * 119.49137 * 179.73406 * 8 7 6 11 11 C 1.41769 * 119.52881 * 0.51356 * 10 8 7 12 12 C 1.47575 * 120.00884 * 179.75892 * 11 10 8 13 13 O 1.21585 * 119.99917 * 179.72181 * 12 11 10 14 14 N 1.34779 * 119.99905 * 359.72539 * 12 11 10 15 15 C 1.46500 * 119.99895 * 180.02562 * 14 12 11 16 16 H 1.09003 * 112.85046 * 336.19048 * 15 14 12 17 17 C 1.53775 * 113.61656 * 107.50207 * 15 14 12 18 18 C 1.53779 * 87.08438 * 139.98199 * 17 15 14 19 19 H 1.09002 * 113.61731 * 89.11293 * 18 17 15 20 20 N 1.46904 * 113.69026 * 220.00632 * 18 17 15 21 21 H 1.00898 * 110.19461 * 38.26126 * 20 18 17 22 22 C 1.48525 * 110.17015 * 160.02936 * 20 18 17 23 23 C 1.55004 * 103.19688 * 158.22811 * 22 20 18 24 24 C 1.54594 * 102.96056 * 322.67535 * 23 22 20 25 25 C 1.47895 * 110.17085 * 276.48759 * 20 18 17 26 26 C 1.53777 * 113.61534 * 204.99945 * 15 14 12 27 27 C 1.36491 * 119.98138 * 359.48376 * 11 10 8 28 28 N 1.35950 * 120.50536 * 0.25080 * 27 11 10 29 29 H 0.96695 * 114.00532 * 59.99962 * 1 2 3 30 30 H 1.08994 * 109.47574 * 119.99900 * 2 1 3 31 31 H 1.48493 * 110.00086 * 60.00198 * 3 2 1 32 32 H 1.48504 * 110.00009 * 181.32219 * 3 2 1 33 33 H 1.08004 * 125.67081 * 359.97438 * 5 4 2 34 34 H 1.08001 * 120.23722 * 180.24725 * 10 8 7 35 35 H 0.97002 * 120.00021 * 359.97438 * 14 12 11 36 36 H 1.08993 * 113.61636 * 25.42563 * 17 15 14 37 37 H 1.09008 * 113.61006 * 254.52805 * 17 15 14 38 38 H 1.08997 * 110.67444 * 276.71736 * 22 20 18 39 39 H 1.09006 * 110.66651 * 39.84913 * 22 20 18 40 40 H 1.08995 * 110.74387 * 204.28787 * 23 22 20 41 41 H 1.08998 * 110.81442 * 81.10166 * 23 22 20 42 42 H 1.08999 * 110.31288 * 262.99308 * 24 23 22 43 43 H 1.09003 * 110.39321 * 140.86987 * 24 23 22 44 44 H 1.09003 * 109.91774 * 334.94630 * 25 20 18 45 45 H 1.09001 * 109.91700 * 96.04876 * 25 20 18 46 46 H 1.08997 * 113.61941 * 105.46412 * 26 15 14 47 47 H 1.09005 * 113.61136 * 334.56577 * 26 15 14 48 48 H 1.07994 * 119.75233 * 180.27865 * 27 11 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 3.0854 -0.4610 -1.8851 6 7 3.1762 -1.2958 -2.9241 7 6 2.1063 -2.0753 -2.9519 8 6 1.7117 -3.1116 -3.8269 9 35 2.8120 -3.5972 -5.2861 10 6 0.5392 -3.7593 -3.6094 11 6 -0.2766 -3.3788 -2.5142 12 6 -1.5563 -4.0725 -2.2710 13 8 -2.2534 -3.7494 -1.3287 14 7 -1.9521 -5.0642 -3.0935 15 6 -3.2227 -5.7524 -2.8524 16 1 -3.5474 -5.6902 -1.8137 17 6 -4.3212 -5.3908 -3.8659 18 6 -4.7193 -6.8760 -3.8457 19 1 -5.4545 -7.1207 -3.0790 20 7 -5.0742 -7.4100 -5.1675 21 1 -4.4674 -7.0222 -5.8742 22 6 -4.9751 -8.8920 -5.1645 23 6 -5.8822 -9.3096 -6.3500 24 6 -7.0481 -8.2977 -6.2677 25 6 -6.4858 -7.0994 -5.4808 26 6 -3.2703 -7.1775 -3.4282 27 6 0.1245 -2.3745 -1.6815 28 7 1.3016 -1.7290 -1.8958 29 1 -0.3934 0.4417 -0.7650 30 1 1.7923 -0.5138 0.8899 31 1 1.5614 2.4679 1.2085 32 1 3.5345 1.7704 -0.0322 33 1 3.8137 0.2892 -1.6144 34 1 0.2277 -4.5562 -4.2685 35 1 -1.3961 -5.3217 -3.8454 36 1 -3.9343 -5.0554 -4.8281 37 1 -5.0867 -4.7281 -3.4621 38 1 -3.9464 -9.2092 -5.3356 39 1 -5.3542 -9.3011 -4.2280 40 1 -6.2458 -10.3285 -6.2176 41 1 -5.3518 -9.2108 -7.2971 42 1 -7.8929 -8.7362 -5.7366 43 1 -7.3512 -7.9854 -7.2671 44 1 -7.0498 -6.9636 -4.5580 45 1 -6.5413 -6.1947 -6.0863 46 1 -3.1873 -7.9574 -2.6712 47 1 -2.5960 -7.3307 -4.2708 48 1 -0.4978 -2.0907 -0.8457 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_11618796_12335884.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 14:06:01 Heat of formation + Delta-G solvation = 169.012815 kcal Electronic energy + Delta-G solvation = -31955.822195 eV Core-core repulsion = 27565.453576 eV Total energy + Delta-G solvation = -4390.368619 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 422.087 amu Computer time = 1.38 seconds Orbital eigenvalues (eV) -44.31375 -43.02318 -41.22086 -39.13614 -38.40306 -38.00921 -35.51795 -34.88573 -33.13911 -32.31333 -31.79930 -30.68953 -30.28023 -26.99504 -26.95017 -26.60974 -24.84626 -24.14417 -23.94106 -22.62954 -22.31491 -21.99780 -21.76219 -19.60587 -19.12458 -18.55498 -18.38246 -18.22317 -17.72444 -17.49796 -16.86822 -16.45216 -16.42676 -16.16027 -16.09072 -15.86384 -15.78517 -15.55745 -15.36887 -15.00223 -14.71954 -14.44778 -14.25701 -14.11215 -13.71415 -13.56673 -13.42552 -13.36059 -13.06273 -12.88827 -12.73205 -12.71142 -12.61063 -12.51630 -12.25975 -12.22442 -11.88932 -11.66452 -11.58066 -11.40584 -11.36782 -11.29362 -10.95298 -10.33718 -10.05922 -9.13798 -5.02469 -0.93118 -0.39913 0.18731 0.86714 0.92369 1.07832 1.37003 1.61241 1.73881 1.88971 1.98185 2.18759 2.35983 2.68723 2.77867 2.90197 3.04683 3.13781 3.21063 3.32020 3.35835 3.41687 3.42660 3.55259 3.67302 3.76896 3.80787 3.86858 3.98307 4.06188 4.08094 4.11410 4.19872 4.30009 4.35325 4.39382 4.44053 4.46126 4.48849 4.61611 4.65978 4.78693 4.85190 4.91450 4.95281 4.98685 5.10492 5.10648 5.16478 5.20854 5.32745 5.54444 6.24798 6.37831 6.46701 6.94869 Molecular weight = 422.09amu Principal moments of inertia in cm(-1) A = 0.008992 B = 0.002049 C = 0.001716 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 3113.155503 B =13661.922498 C =16312.617445 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.550 6.550 2 C -0.035 4.035 3 Si 0.797 3.203 4 C -0.080 4.080 5 C 0.032 3.968 6 N -0.500 5.500 7 C 0.227 3.773 8 C -0.085 4.085 9 Br 0.003 6.997 10 C -0.014 4.014 11 C -0.172 4.172 12 C 0.585 3.415 13 O -0.561 6.561 14 N -0.695 5.695 15 C 0.108 3.892 16 H 0.106 0.894 17 C -0.158 4.158 18 C 0.030 3.970 19 H 0.173 0.827 20 N -0.369 5.369 21 H 0.439 0.561 22 C 0.005 3.995 23 C -0.150 4.150 24 C -0.150 4.150 25 C 0.001 3.999 26 C -0.144 4.144 27 C 0.156 3.844 28 N -0.357 5.357 29 H 0.396 0.604 30 H 0.120 0.880 31 H -0.289 1.289 32 H -0.273 1.273 33 H 0.200 0.800 34 H 0.198 0.802 35 H 0.420 0.580 36 H 0.128 0.872 37 H 0.093 0.907 38 H 0.151 0.849 39 H 0.138 0.862 40 H 0.095 0.905 41 H 0.095 0.905 42 H 0.086 0.914 43 H 0.088 0.912 44 H 0.135 0.865 45 H 0.141 0.859 46 H 0.109 0.891 47 H 0.137 0.863 48 H 0.191 0.809 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -25.172 -19.782 -12.147 34.242 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.357 6.357 2 C -0.145 4.145 3 Si 0.699 3.301 4 C -0.191 4.191 5 C -0.117 4.117 6 N -0.219 5.219 7 C -0.018 4.018 8 C -0.168 4.168 9 Br 0.088 6.912 10 C -0.040 4.040 11 C -0.180 4.180 12 C 0.371 3.629 13 O -0.440 6.440 14 N -0.347 5.347 15 C 0.003 3.997 16 H 0.124 0.876 17 C -0.197 4.197 18 C -0.073 4.073 19 H 0.190 0.810 20 N 0.051 4.949 21 H 0.277 0.723 22 C -0.116 4.116 23 C -0.188 4.188 24 C -0.188 4.188 25 C -0.120 4.120 26 C -0.182 4.182 27 C 0.029 3.971 28 N -0.030 5.030 29 H 0.246 0.754 30 H 0.138 0.862 31 H -0.216 1.216 32 H -0.199 1.199 33 H 0.217 0.783 34 H 0.215 0.785 35 H 0.260 0.740 36 H 0.146 0.854 37 H 0.112 0.888 38 H 0.169 0.831 39 H 0.156 0.844 40 H 0.113 0.887 41 H 0.113 0.887 42 H 0.105 0.895 43 H 0.107 0.893 44 H 0.153 0.847 45 H 0.159 0.841 46 H 0.128 0.872 47 H 0.155 0.845 48 H 0.208 0.792 Dipole moment (debyes) X Y Z Total from point charges -24.142 -19.496 -11.378 33.051 hybrid contribution 0.035 -0.090 0.847 0.853 sum -24.107 -19.587 -10.531 32.797 Atomic orbital electron populations 1.86475 1.16829 1.81610 1.50834 1.24950 0.85272 1.10645 0.93613 0.93225 0.78633 0.73064 0.85198 1.22226 0.97929 0.96683 1.02297 1.22783 0.96734 1.00216 0.91939 1.70827 1.20512 1.08265 1.22248 1.20846 0.89620 0.99838 0.91528 1.20664 0.99004 0.99246 0.97877 1.96886 1.67301 1.90313 1.36683 1.21407 0.89534 0.97702 0.95344 1.19366 0.98853 1.00808 0.98965 1.17422 0.83372 0.80087 0.82038 1.90897 1.55823 1.65923 1.31377 1.45528 1.23354 1.34974 1.30859 1.22437 0.83127 0.93023 1.01146 0.87560 1.24066 0.99059 0.94167 1.02420 1.24619 1.00995 0.96800 0.84844 0.80996 1.46151 1.16834 1.16301 1.15585 0.72281 1.24810 1.06930 0.75755 1.04112 1.22928 0.95726 1.01482 0.98669 1.22688 0.99482 0.94190 1.02426 1.24331 0.79155 1.02447 1.06070 1.23944 0.93412 0.96666 1.04195 1.22383 0.84811 0.90678 0.99193 1.42689 1.15258 1.24062 1.20995 0.75366 0.86232 1.21634 1.19942 0.78300 0.78462 0.74009 0.85395 0.88846 0.83064 0.84424 0.88684 0.88666 0.89548 0.89304 0.84729 0.84106 0.87200 0.84534 0.79211 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 9.70 10.90 -148.98 -1.62 8.08 16 2 C -0.03 0.58 3.06 71.24 0.22 0.80 16 3 Si 0.80 -13.71 31.34 68.60 2.15 -11.56 16 4 C -0.08 1.12 6.24 41.01 0.26 1.37 16 5 C 0.03 -0.35 10.44 83.68 0.87 0.52 16 6 N -0.50 3.39 11.30 -194.11 -2.19 1.20 16 7 C 0.23 -2.60 7.59 134.18 1.02 -1.58 16 8 C -0.09 1.52 6.24 22.42 0.14 1.66 16 9 Br 0.00 -0.05 33.72 -20.37 -0.69 -0.73 16 10 C -0.01 0.38 9.26 22.56 0.21 0.59 16 11 C -0.17 4.23 5.84 -20.35 -0.12 4.11 16 12 C 0.58 -16.17 7.76 86.71 0.67 -15.50 16 13 O -0.56 10.42 15.87 -3.98 -0.06 10.35 16 14 N -0.69 27.78 5.31 -443.17 -2.35 25.43 16 15 C 0.11 -4.93 4.24 45.51 0.19 -4.73 16 16 H 0.11 -4.11 7.46 -2.39 -0.02 -4.12 16 17 C -0.16 8.42 7.52 31.12 0.23 8.66 16 18 C 0.03 -1.84 2.75 45.44 0.12 -1.72 16 19 H 0.17 -10.55 7.85 -2.39 -0.02 -10.57 16 20 N -0.37 23.87 0.57 -854.66 -0.49 23.39 16 21 H 0.44 -30.39 8.34 -89.70 -0.75 -31.14 16 22 C 0.00 -0.28 5.82 86.67 0.50 0.22 16 23 C -0.15 8.13 7.06 31.82 0.22 8.35 16 24 C -0.15 7.94 6.93 31.47 0.22 8.16 16 25 C 0.00 -0.09 6.49 86.45 0.56 0.48 16 26 C -0.14 8.09 6.97 31.12 0.22 8.31 16 27 C 0.16 -2.91 9.91 83.65 0.83 -2.08 16 28 N -0.36 5.14 2.93 -337.72 -0.99 4.15 16 29 H 0.40 -9.81 8.70 -74.06 -0.64 -10.46 16 30 H 0.12 -1.91 7.96 -2.39 -0.02 -1.93 16 31 H -0.29 2.80 7.11 99.48 0.71 3.51 16 32 H -0.27 3.51 6.80 99.48 0.68 4.18 16 33 H 0.20 -2.86 6.70 -2.91 -0.02 -2.87 16 34 H 0.20 -7.50 6.44 -2.91 -0.02 -7.51 16 35 H 0.42 -19.57 6.76 -92.71 -0.63 -20.19 16 36 H 0.13 -7.28 7.97 -2.39 -0.02 -7.30 16 37 H 0.09 -4.53 8.14 -2.38 -0.02 -4.55 16 38 H 0.15 -9.70 8.14 -2.39 -0.02 -9.71 16 39 H 0.14 -8.44 7.98 -2.38 -0.02 -8.46 16 40 H 0.09 -4.68 8.14 -2.39 -0.02 -4.70 16 41 H 0.09 -5.06 8.14 -2.39 -0.02 -5.08 16 42 H 0.09 -4.24 8.14 -2.39 -0.02 -4.26 16 43 H 0.09 -4.39 8.14 -2.39 -0.02 -4.41 16 44 H 0.13 -8.11 7.54 -2.39 -0.02 -8.13 16 45 H 0.14 -8.64 8.14 -2.39 -0.02 -8.65 16 46 H 0.11 -5.92 8.14 -2.39 -0.02 -5.94 16 47 H 0.14 -8.36 8.12 -2.38 -0.02 -8.38 16 48 H 0.19 -3.44 6.19 -2.91 -0.02 -3.45 16 Total: 1.00 -85.37 403.10 -0.85 -86.22 By element: Atomic # 1 Polarization: -163.15 SS G_CDS: -0.98 Total: -164.13 kcal Atomic # 6 Polarization: 11.24 SS G_CDS: 6.37 Total: 17.62 kcal Atomic # 7 Polarization: 60.18 SS G_CDS: -6.02 Total: 54.16 kcal Atomic # 8 Polarization: 20.12 SS G_CDS: -1.69 Total: 18.43 kcal Atomic # 14 Polarization: -13.71 SS G_CDS: 2.15 Total: -11.56 kcal Atomic # 35 Polarization: -0.05 SS G_CDS: -0.69 Total: -0.73 kcal Total: -85.37 -0.85 -86.22 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_11618796_12335884.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 255.231 kcal (2) G-P(sol) polarization free energy of solvation -85.367 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 169.863 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.851 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -86.218 kcal (6) G-S(sol) free energy of system = (1) + (5) 169.013 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.38 seconds