Wall clock time and date at job start Thu Mar 4 2021 14:06:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 N 1.28468 * 124.88120 * 2 1 4 4 C 1.31815 * 110.07092 * 179.82419 * 3 2 1 5 5 C 1.47707 * 126.51683 * 180.17417 * 4 3 2 6 6 O 1.21570 * 119.99732 * 180.30193 * 5 4 3 7 7 N 1.34775 * 120.00023 * 0.29848 * 5 4 3 8 8 C 1.46506 * 119.99929 * 179.97438 * 7 5 4 9 9 H 1.09003 * 112.84268 * 25.33598 * 8 7 5 10 10 C 1.53777 * 113.61418 * 156.53080 * 8 7 5 11 11 C 1.53773 * 87.08022 * 139.98546 * 10 8 7 12 12 H 1.09009 * 113.61607 * 89.20330 * 11 10 8 13 13 N 1.46903 * 113.61629 * 220.01699 * 11 10 8 14 14 H 1.00906 * 110.19210 * 56.37139 * 13 11 10 15 15 C 1.48530 * 110.17576 * 178.21517 * 13 11 10 16 16 C 1.54932 * 103.22701 * 158.28104 * 15 13 11 17 17 C 1.54594 * 102.92523 * 322.58773 * 16 15 13 18 18 C 1.47898 * 110.17194 * 294.60277 * 13 11 10 19 19 C 1.53774 * 113.61780 * 254.14058 * 8 7 5 20 20 C 1.41499 * 106.96211 * 0.42626 * 4 3 2 21 21 C 1.35033 * 124.88684 * 180.30323 * 2 1 3 22 22 C 1.50705 * 126.38097 * 359.97438 * 21 2 1 23 23 O 1.42893 * 109.47527 * 30.00102 * 22 21 2 24 24 Si 1.86301 * 109.46780 * 150.00457 * 22 21 2 25 25 H 1.09007 * 109.47335 * 269.69787 * 1 2 3 26 26 H 1.09007 * 109.47421 * 29.69639 * 1 2 3 27 27 H 1.08996 * 109.47371 * 149.70024 * 1 2 3 28 28 H 0.97001 * 120.00541 * 0.02562 * 7 5 4 29 29 H 1.09004 * 113.61507 * 254.53566 * 10 8 7 30 30 H 1.08994 * 113.61455 * 25.43493 * 10 8 7 31 31 H 1.09001 * 110.66731 * 276.71946 * 15 13 11 32 32 H 1.09007 * 110.66244 * 39.84644 * 15 13 11 33 33 H 1.09006 * 110.72478 * 204.23043 * 16 15 13 34 34 H 1.08996 * 110.72295 * 80.94997 * 16 15 13 35 35 H 1.08998 * 110.31044 * 263.04609 * 17 16 15 36 36 H 1.08997 * 110.31319 * 140.87234 * 17 16 15 37 37 H 1.09003 * 109.91648 * 334.94340 * 18 13 11 38 38 H 1.09000 * 109.91968 * 96.23922 * 18 13 11 39 39 H 1.09000 * 113.61290 * 334.56984 * 19 8 7 40 40 H 1.08999 * 113.61512 * 105.46892 * 19 8 7 41 41 H 1.08000 * 127.24848 * 179.78233 * 20 4 3 42 42 H 1.09005 * 109.46863 * 269.99677 * 22 21 2 43 43 H 0.96702 * 113.99823 * 59.99395 * 23 22 21 44 44 H 1.48496 * 110.00230 * 58.67571 * 24 22 21 45 45 H 1.48499 * 109.99772 * 179.97438 * 24 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.1997 1.0539 0.0000 4 6 3.4740 0.7169 0.0038 5 6 4.6272 1.6399 0.0087 6 8 5.7596 1.1977 0.0063 7 7 4.4240 2.9722 0.0157 8 6 5.5678 3.8877 0.0211 9 1 6.4657 3.4456 -0.4107 10 6 5.2414 5.2846 -0.5328 11 6 6.1232 5.8507 0.5927 12 1 7.1736 5.9473 0.3177 13 7 5.5806 7.0687 1.2092 14 1 4.6498 6.8971 1.5589 15 6 6.4671 7.5239 2.3106 16 6 6.1092 9.0242 2.4567 17 6 5.8786 9.4687 0.9941 18 6 5.5603 8.1728 0.2254 19 6 5.8075 4.5660 1.3801 20 6 3.5272 -0.6970 -0.0037 21 6 2.2373 -1.1076 -0.0059 22 6 1.7533 -2.5348 -0.0129 23 8 0.4952 -2.6079 -0.6864 24 14 2.9943 -3.6069 -0.8969 25 1 -0.3634 -0.0054 1.0277 26 1 -0.3634 0.8927 -0.5091 27 1 -0.3634 -0.8872 -0.5185 28 1 3.5204 3.3251 0.0179 29 1 5.6403 5.4625 -1.5315 30 1 4.1896 5.5556 -0.4416 31 1 6.2453 6.9840 3.2311 32 1 7.5151 7.4033 2.0357 33 1 6.9368 9.5767 2.9018 34 1 5.2004 9.1483 3.0454 35 1 6.7791 9.9345 0.5937 36 1 5.0371 10.1590 0.9366 37 1 6.3157 8.0008 -0.5414 38 1 4.5733 8.2450 -0.2315 39 1 4.9108 4.6402 1.9953 40 1 6.6628 4.1647 1.9237 41 1 4.4108 -1.3180 -0.0064 42 1 1.6371 -2.8841 1.0132 43 1 0.5239 -2.3118 -1.6065 44 1 4.3152 -3.5147 -0.2248 45 1 2.5290 -5.0171 -0.9101 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_11618796_13259642.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 14:06:05 Heat of formation + Delta-G solvation = 149.059148 kcal Electronic energy + Delta-G solvation = -25533.476268 eV Core-core repulsion = 21866.738817 eV Total energy + Delta-G solvation = -3666.737451 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 308.176 amu Computer time = 1.02 seconds Orbital eigenvalues (eV) -43.90563 -43.03507 -40.74054 -38.82911 -38.15661 -35.00791 -34.37421 -33.01841 -32.45245 -30.71351 -28.72367 -27.02914 -26.95416 -25.89636 -24.21625 -23.82371 -22.37162 -22.25931 -21.69804 -21.07351 -19.26193 -18.85241 -18.49469 -17.63965 -17.57081 -17.12400 -16.71036 -16.61967 -16.12681 -16.06494 -15.79262 -15.72086 -15.58755 -15.16121 -14.93601 -14.50064 -14.22446 -14.05718 -13.78438 -13.67112 -13.48908 -13.47600 -12.90754 -12.75944 -12.68413 -12.65430 -12.48966 -12.41524 -12.30177 -11.94350 -11.91168 -11.67870 -11.40706 -10.90880 -10.40480 -10.10018 -10.02235 -5.03588 0.36711 0.73208 0.84826 1.13520 1.50094 1.64667 1.93325 2.04125 2.18331 2.33418 2.66006 2.87853 3.09089 3.18359 3.26700 3.27494 3.30535 3.52830 3.62968 3.72514 3.86324 3.97607 3.98325 4.03522 4.07584 4.26672 4.29187 4.33096 4.34911 4.40098 4.43590 4.46950 4.56348 4.59194 4.63350 4.73689 4.78562 4.80778 4.90070 4.96647 5.06906 5.09121 5.14853 5.16358 5.34839 5.59279 6.27241 6.48248 6.75219 7.03992 Molecular weight = 308.18amu Principal moments of inertia in cm(-1) A = 0.031162 B = 0.002669 C = 0.002545 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 898.306277 B =10489.731593 C =11000.130453 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.062 3.938 2 N -0.258 5.258 3 N -0.253 5.253 4 C -0.040 4.040 5 C 0.609 3.391 6 O -0.566 6.566 7 N -0.694 5.694 8 C 0.104 3.896 9 H 0.106 0.894 10 C -0.141 4.141 11 C 0.035 3.965 12 H 0.177 0.823 13 N -0.370 5.370 14 H 0.437 0.563 15 C 0.004 3.996 16 C -0.149 4.149 17 C -0.148 4.148 18 C 0.000 4.000 19 C -0.159 4.159 20 C -0.200 4.200 21 C -0.008 4.008 22 C -0.035 4.035 23 O -0.542 6.542 24 Si 0.788 3.212 25 H 0.088 0.912 26 H 0.110 0.890 27 H 0.132 0.868 28 H 0.420 0.580 29 H 0.113 0.887 30 H 0.130 0.870 31 H 0.142 0.858 32 H 0.139 0.861 33 H 0.096 0.904 34 H 0.093 0.907 35 H 0.088 0.912 36 H 0.091 0.909 37 H 0.138 0.862 38 H 0.145 0.855 39 H 0.120 0.880 40 H 0.093 0.907 41 H 0.157 0.843 42 H 0.125 0.875 43 H 0.400 0.600 44 H -0.288 1.288 45 H -0.291 1.291 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.806 24.588 1.498 24.793 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 N -0.047 5.047 3 N -0.091 5.091 4 C -0.199 4.199 5 C 0.394 3.606 6 O -0.443 6.443 7 N -0.346 5.346 8 C -0.001 4.001 9 H 0.124 0.876 10 C -0.179 4.179 11 C -0.068 4.068 12 H 0.195 0.805 13 N 0.050 4.950 14 H 0.275 0.725 15 C -0.117 4.117 16 C -0.187 4.187 17 C -0.186 4.186 18 C -0.121 4.121 19 C -0.198 4.198 20 C -0.229 4.229 21 C -0.133 4.133 22 C -0.146 4.146 23 O -0.351 6.351 24 Si 0.692 3.308 25 H 0.106 0.894 26 H 0.129 0.871 27 H 0.150 0.850 28 H 0.258 0.742 29 H 0.131 0.869 30 H 0.148 0.852 31 H 0.160 0.840 32 H 0.157 0.843 33 H 0.115 0.885 34 H 0.112 0.888 35 H 0.107 0.893 36 H 0.109 0.891 37 H 0.156 0.844 38 H 0.163 0.837 39 H 0.138 0.862 40 H 0.112 0.888 41 H 0.174 0.826 42 H 0.143 0.857 43 H 0.251 0.749 44 H -0.215 1.215 45 H -0.218 1.218 Dipole moment (debyes) X Y Z Total from point charges 3.327 24.342 2.008 24.650 hybrid contribution -0.250 -0.729 0.872 1.163 sum 3.078 23.613 2.879 23.986 Atomic orbital electron populations 1.22945 0.70504 1.08216 1.05962 1.45679 1.08986 1.01692 1.48367 1.73390 1.02234 1.14512 1.18962 1.21855 0.91395 0.93980 1.12632 1.16929 0.85747 0.82756 0.75180 1.90833 1.23968 1.77974 1.51503 1.45581 1.11153 1.03929 1.73908 1.22478 0.90527 0.89073 0.98015 0.87559 1.23885 1.02551 0.91504 0.99931 1.24625 1.03659 0.81993 0.96501 0.80535 1.46173 1.18921 1.13847 1.16024 0.72478 1.24787 0.98358 0.97159 0.91403 1.22923 1.05026 0.93420 0.97380 1.22690 1.05029 0.96674 0.94220 1.24375 1.10258 0.84676 0.92756 1.24064 1.05340 0.92758 0.97675 1.21637 0.96982 0.94519 1.09731 1.21991 0.90890 0.92091 1.08369 1.24731 0.94301 0.92649 1.02919 1.86473 1.29013 1.88574 1.31000 0.93286 0.73603 0.75774 0.88120 0.89363 0.87142 0.85031 0.74231 0.86870 0.85182 0.83981 0.84316 0.88545 0.88820 0.89297 0.89080 0.84362 0.83680 0.86157 0.88813 0.82581 0.85735 0.74866 1.21518 1.21756 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -1.55 11.00 127.77 1.41 -0.15 16 2 N -0.26 4.96 3.70 -355.91 -1.32 3.65 16 3 N -0.25 4.68 11.67 -48.18 -0.56 4.12 16 4 C -0.04 0.64 7.13 42.45 0.30 0.94 16 5 C 0.61 -11.11 7.82 86.75 0.68 -10.43 16 6 O -0.57 5.74 16.54 -3.94 -0.07 5.68 16 7 N -0.69 21.48 5.36 -443.04 -2.37 19.10 16 8 C 0.10 -4.11 4.21 45.51 0.19 -3.92 16 9 H 0.11 -3.52 7.50 -2.39 -0.02 -3.54 16 10 C -0.14 7.20 7.05 31.12 0.22 7.42 16 11 C 0.04 -2.00 2.63 45.50 0.12 -1.88 16 12 H 0.18 -10.31 7.99 -2.38 -0.02 -10.33 16 13 N -0.37 22.74 0.55 -854.45 -0.47 22.27 16 14 H 0.44 -28.56 8.39 -89.69 -0.75 -29.31 16 15 C 0.00 -0.22 6.30 86.65 0.55 0.32 16 16 C -0.15 7.74 7.06 31.80 0.22 7.97 16 17 C -0.15 7.67 6.93 31.47 0.22 7.89 16 18 C 0.00 -0.02 6.04 86.45 0.52 0.50 16 19 C -0.16 7.59 7.49 31.18 0.23 7.83 16 20 C -0.20 2.79 9.35 22.41 0.21 2.99 16 21 C -0.01 0.14 6.18 41.40 0.26 0.40 16 22 C -0.03 0.66 2.99 71.24 0.21 0.88 16 23 O -0.54 11.70 10.02 -148.98 -1.49 10.21 16 24 Si 0.79 -13.72 31.37 68.60 2.15 -11.56 16 25 H 0.09 -2.20 8.14 -2.38 -0.02 -2.22 16 26 H 0.11 -3.09 8.14 -2.38 -0.02 -3.11 16 27 H 0.13 -3.52 5.00 -2.39 -0.01 -3.53 16 28 H 0.42 -14.69 8.44 -92.71 -0.78 -15.47 16 29 H 0.11 -5.67 8.14 -2.39 -0.02 -5.68 16 30 H 0.13 -7.17 8.11 -2.39 -0.02 -7.18 16 31 H 0.14 -8.33 8.14 -2.39 -0.02 -8.35 16 32 H 0.14 -8.05 7.87 -2.38 -0.02 -8.07 16 33 H 0.10 -4.56 8.14 -2.38 -0.02 -4.58 16 34 H 0.09 -4.75 8.14 -2.39 -0.02 -4.77 16 35 H 0.09 -4.29 8.14 -2.39 -0.02 -4.31 16 36 H 0.09 -4.43 8.14 -2.39 -0.02 -4.45 16 37 H 0.14 -8.22 7.72 -2.39 -0.02 -8.24 16 38 H 0.15 -8.84 8.14 -2.39 -0.02 -8.86 16 39 H 0.12 -6.03 8.02 -2.39 -0.02 -6.05 16 40 H 0.09 -4.07 8.14 -2.39 -0.02 -4.09 16 41 H 0.16 -1.94 6.84 -2.91 -0.02 -1.96 16 42 H 0.13 -2.32 7.96 -2.38 -0.02 -2.34 16 43 H 0.40 -11.67 8.39 -74.06 -0.62 -12.29 16 44 H -0.29 3.18 6.83 99.48 0.68 3.86 16 45 H -0.29 2.88 7.11 99.48 0.71 3.58 16 Total: 1.00 -77.17 359.00 0.08 -77.09 By element: Atomic # 1 Polarization: -150.18 SS G_CDS: -1.13 Total: -151.31 kcal Atomic # 6 Polarization: 15.43 SS G_CDS: 5.34 Total: 20.77 kcal Atomic # 7 Polarization: 53.85 SS G_CDS: -4.72 Total: 49.13 kcal Atomic # 8 Polarization: 17.44 SS G_CDS: -1.56 Total: 15.88 kcal Atomic # 14 Polarization: -13.72 SS G_CDS: 2.15 Total: -11.56 kcal Total: -77.17 0.08 -77.09 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_11618796_13259642.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 226.147 kcal (2) G-P(sol) polarization free energy of solvation -77.170 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 148.977 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.083 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -77.088 kcal (6) G-S(sol) free energy of system = (1) + (5) 149.059 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.02 seconds