Wall clock time and date at job start Thu Mar 4 2021 15:20:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 C 1.46504 * 119.99562 * 2 1 4 4 Si 1.86300 * 109.46993 * 269.99579 * 3 2 1 5 5 C 1.86300 * 109.46952 * 60.00075 * 4 3 2 6 6 C 1.86301 * 109.46939 * 179.97438 * 4 3 2 7 7 C 1.86300 * 109.47067 * 299.99938 * 4 3 2 8 8 C 1.34776 * 120.00321 * 179.97438 * 2 1 3 9 9 O 1.21589 * 119.99851 * 184.75654 * 8 2 1 10 10 C 1.47575 * 120.00097 * 4.75908 * 8 2 1 11 11 C 1.36498 * 120.00624 * 281.59385 * 10 8 2 12 12 N 1.35948 * 120.50072 * 179.97438 * 11 10 8 13 13 C 1.37003 * 132.40794 * 179.97438 * 12 11 10 14 14 C 1.50692 * 126.43342 * 0.02616 * 13 12 11 15 15 O 1.42911 * 109.46875 * 329.99580 * 14 13 12 16 16 Si 1.86295 * 109.47302 * 209.99935 * 14 13 12 17 17 H 1.48504 * 109.47250 * 59.99564 * 16 14 13 18 18 H 1.48505 * 109.47125 * 299.99838 * 16 14 13 19 19 H 1.48499 * 109.47512 * 179.97438 * 16 14 13 20 20 C 1.35009 * 107.13805 * 180.28424 * 13 12 11 21 21 N 1.33583 * 108.65578 * 359.57303 * 20 13 12 22 22 C 1.32413 * 109.22282 * 0.43585 * 21 20 13 23 23 C 1.41253 * 132.11580 * 179.70862 * 22 21 20 24 24 Br 1.89100 * 120.25653 * 0.04880 * 23 22 21 25 25 C 1.35702 * 119.48975 * 180.02562 * 23 22 21 26 26 H 1.08996 * 109.47541 * 264.71177 * 1 2 3 27 27 H 1.08996 * 109.47341 * 24.71605 * 1 2 3 28 28 H 1.09007 * 109.46359 * 144.71781 * 1 2 3 29 29 H 1.09003 * 109.46894 * 29.99836 * 3 2 1 30 30 H 1.09001 * 109.47406 * 149.99477 * 3 2 1 31 31 H 1.09004 * 109.47245 * 60.00381 * 5 4 3 32 32 H 1.09002 * 109.46982 * 179.97438 * 5 4 3 33 33 H 1.08994 * 109.47411 * 300.00072 * 5 4 3 34 34 H 1.09005 * 109.47159 * 60.00421 * 6 4 3 35 35 H 1.09002 * 109.46686 * 179.97438 * 6 4 3 36 36 H 1.09004 * 109.47591 * 299.99824 * 6 4 3 37 37 H 1.09003 * 109.46710 * 60.00302 * 7 4 3 38 38 H 1.08999 * 109.46717 * 179.97438 * 7 4 3 39 39 H 1.08995 * 109.47134 * 300.00311 * 7 4 3 40 40 H 1.07996 * 119.74738 * 359.97438 * 11 10 8 41 41 H 1.08995 * 109.47157 * 89.99691 * 14 13 12 42 42 H 0.96692 * 113.99740 * 300.00369 * 15 14 13 43 43 H 1.07996 * 125.67387 * 179.70156 * 20 13 12 44 44 H 1.07997 * 120.23582 * 179.97438 * 25 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1974 1.2688 0.0000 4 14 2.5080 1.8065 -1.7565 5 6 0.8801 2.0291 -2.6347 6 6 3.4387 3.4204 -1.7565 7 6 3.5150 0.5082 -2.6345 8 6 2.1389 -1.1672 0.0005 9 8 3.3517 -1.1688 0.0878 10 6 1.4050 -2.4431 -0.1049 11 6 0.7769 -2.9618 0.9903 12 7 0.0975 -4.1362 0.9044 13 6 -0.6063 -4.8661 1.8258 14 6 -0.8148 -4.5140 3.2761 15 8 0.3062 -3.7650 3.7503 16 14 -0.9855 -6.0764 4.2762 17 1 0.2486 -6.8907 4.1368 18 1 -2.1503 -6.8548 3.7834 19 1 -1.1903 -5.7295 5.7055 20 6 -1.0732 -5.9629 1.1920 21 7 -0.6835 -5.9168 -0.0849 22 6 0.0312 -4.8200 -0.2833 23 6 0.6735 -4.3023 -1.4300 24 35 0.5886 -5.2354 -3.0725 25 6 1.3516 -3.1300 -1.3439 26 1 -0.3634 -0.0947 1.0232 27 1 -0.3634 0.9335 -0.4297 28 1 -0.3632 -0.8390 -0.5936 29 1 1.6082 2.0284 0.5138 30 1 3.1498 1.1386 0.5139 31 1 0.2910 2.7888 -2.1210 32 1 1.0618 2.3442 -3.6623 33 1 0.3352 1.0852 -2.6347 34 1 4.3911 3.2906 -1.2425 35 1 3.6207 3.7348 -2.7842 36 1 2.8491 4.1799 -1.2428 37 1 2.9699 -0.4358 -2.6345 38 1 3.6962 0.8227 -3.6623 39 1 4.4673 0.3779 -2.1206 40 1 0.8200 -2.4353 1.9322 41 1 -1.7206 -3.9164 3.3783 42 1 1.1482 -4.2363 3.6892 43 1 -1.6653 -6.7460 1.6418 44 1 1.8474 -2.7235 -2.2129 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_11678528_12335884.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 15:20:48 Heat of formation + Delta-G solvation = -3.445034 kcal Electronic energy + Delta-G solvation = -27782.601546 eV Core-core repulsion = 23906.694659 eV Total energy + Delta-G solvation = -3875.906887 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 399.053 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -44.20572 -41.19169 -38.54858 -38.09006 -36.66076 -35.25230 -32.65613 -31.81024 -30.42138 -29.68971 -29.02676 -28.46276 -28.33267 -27.25937 -26.95647 -24.89149 -23.92211 -22.49852 -20.87647 -19.42123 -18.77479 -18.10100 -17.70011 -17.57838 -17.24409 -16.66020 -16.34835 -16.02911 -15.94366 -15.51556 -15.17622 -14.63484 -14.39376 -14.32097 -14.22259 -14.19216 -14.08723 -13.90739 -13.71863 -13.45846 -13.40912 -13.32728 -13.23087 -13.11696 -13.07364 -12.92031 -12.77522 -12.28624 -12.17795 -11.80095 -11.42974 -11.34984 -11.24077 -11.11943 -10.98466 -10.92334 -10.86693 -9.98201 -9.39695 -9.04031 -0.79283 -0.23671 0.25314 0.79673 1.06471 1.29328 1.34270 1.40035 1.51899 1.62753 1.72174 1.77100 1.80842 2.00070 2.12918 2.51137 2.84458 2.91228 3.00131 3.32092 3.43599 3.47655 3.84342 3.93270 4.10391 4.20001 4.21888 4.24906 4.36507 4.39777 4.52643 4.54480 4.60437 4.61202 4.65552 4.67078 4.75677 4.80357 4.87441 4.98873 5.21457 5.29653 5.36853 5.44804 5.58440 5.62484 6.06446 6.09460 6.56301 6.90906 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.067 3.933 2 N -0.587 5.587 3 C -0.182 4.182 4 Si 0.996 3.004 5 C -0.447 4.447 6 C -0.448 4.448 7 C -0.442 4.442 8 C 0.565 3.435 9 O -0.509 6.509 10 C -0.147 4.147 11 C 0.122 3.878 12 N -0.348 5.348 13 C -0.091 4.091 14 C -0.049 4.049 15 O -0.543 6.543 16 Si 0.971 3.029 17 H -0.247 1.247 18 H -0.242 1.242 19 H -0.245 1.245 20 C 0.043 3.957 21 N -0.463 5.463 22 C 0.243 3.757 23 C -0.059 4.059 24 Br 0.009 6.991 25 C -0.033 4.033 26 H 0.061 0.939 27 H 0.086 0.914 28 H 0.072 0.928 29 H 0.088 0.912 30 H 0.097 0.903 31 H 0.069 0.931 32 H 0.071 0.929 33 H 0.068 0.932 34 H 0.071 0.929 35 H 0.072 0.928 36 H 0.070 0.930 37 H 0.062 0.938 38 H 0.067 0.933 39 H 0.074 0.926 40 H 0.184 0.816 41 H 0.127 0.873 42 H 0.380 0.620 43 H 0.190 0.810 44 H 0.158 0.842 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.910 3.840 2.066 5.242 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.075 4.075 2 N -0.319 5.319 3 C -0.350 4.350 4 Si 1.192 2.808 5 C -0.555 4.555 6 C -0.556 4.556 7 C -0.550 4.550 8 C 0.350 3.650 9 O -0.384 6.384 10 C -0.154 4.154 11 C -0.003 4.003 12 N -0.020 5.020 13 C -0.203 4.203 14 C -0.159 4.159 15 O -0.348 6.348 16 Si 0.789 3.211 17 H -0.170 1.170 18 H -0.165 1.165 19 H -0.168 1.168 20 C -0.108 4.108 21 N -0.181 5.181 22 C -0.002 4.002 23 C -0.142 4.142 24 Br 0.094 6.906 25 C -0.059 4.059 26 H 0.079 0.921 27 H 0.104 0.896 28 H 0.091 0.909 29 H 0.106 0.894 30 H 0.115 0.885 31 H 0.088 0.912 32 H 0.091 0.909 33 H 0.088 0.912 34 H 0.090 0.910 35 H 0.091 0.909 36 H 0.089 0.911 37 H 0.081 0.919 38 H 0.087 0.913 39 H 0.093 0.907 40 H 0.201 0.799 41 H 0.144 0.856 42 H 0.228 0.772 43 H 0.207 0.793 44 H 0.175 0.825 Dipole moment (debyes) X Y Z Total from point charges -3.076 2.564 1.617 4.318 hybrid contribution 0.496 0.829 0.575 1.124 sum -2.580 3.392 2.192 4.793 Atomic orbital electron populations 1.21996 0.78874 1.04166 1.02505 1.47413 1.07035 1.05195 1.72305 1.26672 1.01044 0.87256 1.20004 0.79647 0.67760 0.67460 0.65913 1.26143 1.16484 1.04548 1.08330 1.26073 1.08635 1.16098 1.04803 1.26068 1.09599 1.11600 1.07706 1.17614 0.86916 0.82584 0.77869 1.90865 1.12869 1.86503 1.48194 1.19293 1.03747 0.98650 0.93749 1.21924 0.91790 0.85748 1.00820 1.42525 1.33637 1.15612 1.10265 1.22001 1.07597 0.96626 0.94040 1.24816 0.92915 1.09002 0.89143 1.86472 1.17903 1.44772 1.85695 0.85422 0.82529 0.73866 0.79295 1.17013 1.16532 1.16758 1.22492 1.01197 0.97156 0.90004 1.70856 1.14024 1.16282 1.16954 1.20392 1.02047 0.91788 0.86022 1.20460 1.04087 0.97555 0.92064 1.96858 1.97715 1.75614 1.20376 1.20980 0.95475 0.91997 0.97477 0.92056 0.89571 0.90936 0.89365 0.88466 0.91191 0.90936 0.91240 0.90966 0.90890 0.91126 0.91912 0.91343 0.90725 0.79921 0.85582 0.77189 0.79349 0.82461 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 -0.24 9.68 59.85 0.58 0.34 16 2 N -0.59 0.87 2.37 -120.30 -0.29 0.58 16 3 C -0.18 0.39 4.65 59.85 0.28 0.67 16 4 Si 1.00 -2.90 12.44 -169.99 -2.12 -5.01 16 5 C -0.45 1.26 8.08 101.05 0.82 2.08 16 6 C -0.45 0.95 8.65 101.05 0.87 1.82 16 7 C -0.44 0.19 8.56 101.05 0.86 1.05 16 8 C 0.57 0.49 6.60 -12.45 -0.08 0.41 16 9 O -0.51 -2.15 16.56 5.29 0.09 -2.06 16 10 C -0.15 -0.03 3.89 -105.37 -0.41 -0.44 16 11 C 0.12 -0.04 9.73 -16.36 -0.16 -0.20 16 12 N -0.35 -0.36 2.93 -58.10 -0.17 -0.53 16 13 C -0.09 0.00 6.25 -81.43 -0.51 -0.51 16 14 C -0.05 0.12 3.06 36.00 0.11 0.23 16 15 O -0.54 1.14 10.90 -35.23 -0.38 0.75 16 16 Si 0.97 -2.52 26.59 -169.99 -4.52 -7.04 16 17 H -0.25 0.34 7.11 56.52 0.40 0.74 16 18 H -0.24 0.63 6.84 56.52 0.39 1.02 16 19 H -0.24 0.34 7.11 56.52 0.40 0.74 16 20 C 0.04 0.05 10.44 -17.94 -0.19 -0.14 16 21 N -0.46 -1.80 11.30 -12.70 -0.14 -1.95 16 22 C 0.24 0.72 7.59 -155.92 -1.18 -0.46 16 23 C -0.06 -0.12 6.24 -39.34 -0.25 -0.37 16 24 Br 0.01 0.02 33.72 -68.01 -2.29 -2.27 16 25 C -0.03 -0.02 9.54 -39.14 -0.37 -0.39 16 26 H 0.06 -0.25 8.14 -51.93 -0.42 -0.67 16 27 H 0.09 -0.43 7.17 -51.93 -0.37 -0.80 16 28 H 0.07 -0.25 7.00 -51.93 -0.36 -0.62 16 29 H 0.09 -0.35 7.89 -51.93 -0.41 -0.76 16 30 H 0.10 -0.07 7.18 -51.93 -0.37 -0.44 16 31 H 0.07 -0.23 7.96 -51.93 -0.41 -0.64 16 32 H 0.07 -0.17 7.96 -51.93 -0.41 -0.58 16 33 H 0.07 -0.19 7.61 -51.93 -0.40 -0.59 16 34 H 0.07 -0.12 7.96 -51.93 -0.41 -0.54 16 35 H 0.07 -0.14 7.96 -51.93 -0.41 -0.55 16 36 H 0.07 -0.18 7.96 -51.93 -0.41 -0.59 16 37 H 0.06 0.01 7.78 -51.93 -0.40 -0.40 16 38 H 0.07 -0.05 7.96 -51.93 -0.41 -0.47 16 39 H 0.07 0.07 7.96 -51.93 -0.41 -0.35 16 40 H 0.18 -0.32 6.69 -52.49 -0.35 -0.67 16 41 H 0.13 -0.47 7.96 -51.93 -0.41 -0.88 16 42 H 0.38 -1.61 8.70 45.56 0.40 -1.21 16 43 H 0.19 -0.29 6.71 -52.49 -0.35 -0.64 16 44 H 0.16 -0.14 8.06 -52.49 -0.42 -0.56 16 LS Contribution 387.47 15.07 5.84 5.84 Total: 0.00 -7.86 387.47 -9.20 -17.06 By element: Atomic # 1 Polarization: -3.87 SS G_CDS: -5.59 Total: -9.46 kcal Atomic # 6 Polarization: 3.72 SS G_CDS: 0.37 Total: 4.09 kcal Atomic # 7 Polarization: -1.30 SS G_CDS: -0.60 Total: -1.90 kcal Atomic # 8 Polarization: -1.01 SS G_CDS: -0.30 Total: -1.31 kcal Atomic # 14 Polarization: -5.41 SS G_CDS: -6.64 Total: -12.05 kcal Atomic # 35 Polarization: 0.02 SS G_CDS: -2.29 Total: -2.27 kcal Total LS contribution 5.84 Total: 5.84 kcal Total: -7.86 -9.20 -17.06 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_11678528_12335884.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 13.612 kcal (2) G-P(sol) polarization free energy of solvation -7.856 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 5.756 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.201 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.057 kcal (6) G-S(sol) free energy of system = (1) + (5) -3.445 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.83 seconds