Wall clock time and date at job start Thu Mar 4 2021 15:20:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 C 1.46504 * 119.99562 * 2 1 4 4 Si 1.86300 * 109.46993 * 269.99579 * 3 2 1 5 5 C 1.86300 * 109.46952 * 60.00075 * 4 3 2 6 6 C 1.86301 * 109.46939 * 179.97438 * 4 3 2 7 7 C 1.86300 * 109.47067 * 299.99938 * 4 3 2 8 8 C 1.34776 * 120.00321 * 179.97438 * 2 1 3 9 9 O 1.21589 * 119.99851 * 184.75654 * 8 2 1 10 10 C 1.47575 * 120.00097 * 4.75908 * 8 2 1 11 11 C 1.36498 * 120.00624 * 281.59385 * 10 8 2 12 12 N 1.35948 * 120.50072 * 179.97438 * 11 10 8 13 13 C 1.37003 * 132.40794 * 179.97438 * 12 11 10 14 14 C 1.50692 * 126.43342 * 0.02616 * 13 12 11 15 15 O 1.42911 * 109.46875 * 329.99580 * 14 13 12 16 16 Si 1.86295 * 109.47302 * 209.99935 * 14 13 12 17 17 H 1.48504 * 109.47250 * 59.99564 * 16 14 13 18 18 H 1.48505 * 109.47125 * 299.99838 * 16 14 13 19 19 H 1.48499 * 109.47512 * 179.97438 * 16 14 13 20 20 C 1.35009 * 107.13805 * 180.28424 * 13 12 11 21 21 N 1.33583 * 108.65578 * 359.57303 * 20 13 12 22 22 C 1.32413 * 109.22282 * 0.43585 * 21 20 13 23 23 C 1.41253 * 132.11580 * 179.70862 * 22 21 20 24 24 Br 1.89100 * 120.25653 * 0.04880 * 23 22 21 25 25 C 1.35702 * 119.48975 * 180.02562 * 23 22 21 26 26 H 1.08996 * 109.47541 * 264.71177 * 1 2 3 27 27 H 1.08996 * 109.47341 * 24.71605 * 1 2 3 28 28 H 1.09007 * 109.46359 * 144.71781 * 1 2 3 29 29 H 1.09003 * 109.46894 * 29.99836 * 3 2 1 30 30 H 1.09001 * 109.47406 * 149.99477 * 3 2 1 31 31 H 1.09004 * 109.47245 * 60.00381 * 5 4 3 32 32 H 1.09002 * 109.46982 * 179.97438 * 5 4 3 33 33 H 1.08994 * 109.47411 * 300.00072 * 5 4 3 34 34 H 1.09005 * 109.47159 * 60.00421 * 6 4 3 35 35 H 1.09002 * 109.46686 * 179.97438 * 6 4 3 36 36 H 1.09004 * 109.47591 * 299.99824 * 6 4 3 37 37 H 1.09003 * 109.46710 * 60.00302 * 7 4 3 38 38 H 1.08999 * 109.46717 * 179.97438 * 7 4 3 39 39 H 1.08995 * 109.47134 * 300.00311 * 7 4 3 40 40 H 1.07996 * 119.74738 * 359.97438 * 11 10 8 41 41 H 1.08995 * 109.47157 * 89.99691 * 14 13 12 42 42 H 0.96692 * 113.99740 * 300.00369 * 15 14 13 43 43 H 1.07996 * 125.67387 * 179.70156 * 20 13 12 44 44 H 1.07997 * 120.23582 * 179.97438 * 25 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1974 1.2688 0.0000 4 14 2.5080 1.8065 -1.7565 5 6 0.8801 2.0291 -2.6347 6 6 3.4387 3.4204 -1.7565 7 6 3.5150 0.5082 -2.6345 8 6 2.1389 -1.1672 0.0005 9 8 3.3517 -1.1688 0.0878 10 6 1.4050 -2.4431 -0.1049 11 6 0.7769 -2.9618 0.9903 12 7 0.0975 -4.1362 0.9044 13 6 -0.6063 -4.8661 1.8258 14 6 -0.8148 -4.5140 3.2761 15 8 0.3062 -3.7650 3.7503 16 14 -0.9855 -6.0764 4.2762 17 1 0.2486 -6.8907 4.1368 18 1 -2.1503 -6.8548 3.7834 19 1 -1.1903 -5.7295 5.7055 20 6 -1.0732 -5.9629 1.1920 21 7 -0.6835 -5.9168 -0.0849 22 6 0.0312 -4.8200 -0.2833 23 6 0.6735 -4.3023 -1.4300 24 35 0.5886 -5.2354 -3.0725 25 6 1.3516 -3.1300 -1.3439 26 1 -0.3634 -0.0947 1.0232 27 1 -0.3634 0.9335 -0.4297 28 1 -0.3632 -0.8390 -0.5936 29 1 1.6082 2.0284 0.5138 30 1 3.1498 1.1386 0.5139 31 1 0.2910 2.7888 -2.1210 32 1 1.0618 2.3442 -3.6623 33 1 0.3352 1.0852 -2.6347 34 1 4.3911 3.2906 -1.2425 35 1 3.6207 3.7348 -2.7842 36 1 2.8491 4.1799 -1.2428 37 1 2.9699 -0.4358 -2.6345 38 1 3.6962 0.8227 -3.6623 39 1 4.4673 0.3779 -2.1206 40 1 0.8200 -2.4353 1.9322 41 1 -1.7206 -3.9164 3.3783 42 1 1.1482 -4.2363 3.6892 43 1 -1.6653 -6.7460 1.6418 44 1 1.8474 -2.7235 -2.2129 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_11678528_12335884.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 15:20:48 Heat of formation + Delta-G solvation = 2.965661 kcal Electronic energy + Delta-G solvation = -27782.323558 eV Core-core repulsion = 23906.694659 eV Total energy + Delta-G solvation = -3875.628898 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 399.053 amu Computer time = 0.84 seconds Orbital eigenvalues (eV) -44.25274 -41.20879 -38.52817 -37.99803 -36.63243 -35.30601 -32.71257 -31.81741 -30.46112 -29.54410 -28.80006 -28.37306 -28.14179 -27.17394 -26.89087 -24.87638 -23.96254 -22.50061 -20.85295 -19.38357 -18.74779 -18.05937 -17.69931 -17.55533 -17.23863 -16.55764 -16.26085 -15.95619 -15.87164 -15.48113 -15.10815 -14.53946 -14.36557 -14.22536 -14.14156 -14.05719 -13.87534 -13.76857 -13.51356 -13.42982 -13.40812 -13.20282 -13.14620 -13.00875 -12.95884 -12.83207 -12.69151 -12.11961 -12.06031 -11.66593 -11.54651 -11.41840 -11.31696 -11.17321 -10.86267 -10.77972 -10.73702 -10.02612 -9.28667 -9.07501 -0.82695 -0.28135 0.17157 0.89474 1.10151 1.38438 1.51838 1.54362 1.59064 1.77918 1.80949 1.96193 1.96979 2.02020 2.17096 2.66826 2.81483 3.00754 3.11581 3.37507 3.48865 3.50404 3.83723 4.11881 4.22009 4.31602 4.33233 4.43966 4.49400 4.52821 4.56945 4.75648 4.78622 4.82984 4.84330 4.85905 4.87338 4.90676 4.96667 5.03895 5.28207 5.36228 5.55083 5.59762 5.62698 5.67185 6.13733 6.36260 6.51026 6.91780 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.058 3.942 2 N -0.578 5.578 3 C -0.195 4.195 4 Si 1.058 2.942 5 C -0.451 4.451 6 C -0.459 4.459 7 C -0.465 4.465 8 C 0.565 3.435 9 O -0.551 6.551 10 C -0.150 4.150 11 C 0.134 3.866 12 N -0.350 5.350 13 C -0.080 4.080 14 C -0.044 4.044 15 O -0.550 6.550 16 Si 1.006 2.994 17 H -0.267 1.267 18 H -0.239 1.239 19 H -0.259 1.259 20 C 0.027 3.973 21 N -0.497 5.497 22 C 0.224 3.776 23 C -0.074 4.074 24 Br -0.001 7.001 25 C -0.026 4.026 26 H 0.072 0.928 27 H 0.106 0.894 28 H 0.072 0.928 29 H 0.114 0.886 30 H 0.082 0.918 31 H 0.082 0.918 32 H 0.068 0.932 33 H 0.071 0.929 34 H 0.065 0.935 35 H 0.070 0.930 36 H 0.080 0.920 37 H 0.054 0.946 38 H 0.067 0.933 39 H 0.055 0.945 40 H 0.201 0.799 41 H 0.145 0.855 42 H 0.389 0.611 43 H 0.209 0.791 44 H 0.166 0.834 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.294 5.215 3.069 7.420 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.084 4.084 2 N -0.309 5.309 3 C -0.362 4.362 4 Si 1.250 2.750 5 C -0.559 4.559 6 C -0.567 4.567 7 C -0.570 4.570 8 C 0.350 3.650 9 O -0.430 6.430 10 C -0.158 4.158 11 C 0.009 3.991 12 N -0.023 5.023 13 C -0.192 4.192 14 C -0.154 4.154 15 O -0.357 6.357 16 Si 0.826 3.174 17 H -0.192 1.192 18 H -0.162 1.162 19 H -0.183 1.183 20 C -0.123 4.123 21 N -0.216 5.216 22 C -0.021 4.021 23 C -0.157 4.157 24 Br 0.085 6.915 25 C -0.052 4.052 26 H 0.091 0.909 27 H 0.125 0.875 28 H 0.091 0.909 29 H 0.132 0.868 30 H 0.100 0.900 31 H 0.101 0.899 32 H 0.088 0.912 33 H 0.090 0.910 34 H 0.084 0.916 35 H 0.089 0.911 36 H 0.099 0.901 37 H 0.073 0.927 38 H 0.087 0.913 39 H 0.074 0.926 40 H 0.217 0.783 41 H 0.163 0.837 42 H 0.238 0.762 43 H 0.225 0.775 44 H 0.183 0.817 Dipole moment (debyes) X Y Z Total from point charges -4.470 3.940 2.612 6.506 hybrid contribution 0.952 0.421 0.304 1.084 sum -3.519 4.361 2.915 6.317 Atomic orbital electron populations 1.22244 0.77251 1.05364 1.03507 1.47490 1.08042 1.04721 1.70612 1.26885 1.00938 0.87419 1.20924 0.78728 0.66731 0.65167 0.64414 1.26161 1.16368 1.05136 1.08228 1.26205 1.08705 1.17054 1.04728 1.26417 1.09439 1.12871 1.08245 1.17671 0.86395 0.83253 0.77664 1.90848 1.14538 1.87058 1.50545 1.19261 1.04000 0.98672 0.93824 1.22145 0.90720 0.85109 1.01148 1.42641 1.33814 1.15841 1.09985 1.22413 1.06217 0.95868 0.94722 1.24949 0.93544 1.09577 0.87291 1.86454 1.18491 1.45223 1.85494 0.84910 0.81467 0.73075 0.77954 1.19169 1.16239 1.18334 1.22908 1.01747 0.98197 0.89454 1.70799 1.15086 1.17190 1.18527 1.20503 1.02627 0.92177 0.86841 1.20478 1.05275 0.98149 0.91785 1.96821 1.97821 1.75997 1.20875 1.21094 0.94608 0.91431 0.98034 0.90906 0.87513 0.90948 0.86792 0.89983 0.89874 0.91237 0.90993 0.91613 0.91118 0.90126 0.92721 0.91335 0.92605 0.78263 0.83718 0.76174 0.77485 0.81662 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.51 9.68 127.77 1.24 0.72 16 2 N -0.58 2.07 2.37 -652.78 -1.55 0.52 16 3 C -0.19 0.97 4.65 127.77 0.59 1.57 16 4 Si 1.06 -6.47 12.44 68.60 0.85 -5.62 16 5 C -0.45 3.21 8.08 113.37 0.92 4.12 16 6 C -0.46 2.10 8.65 113.37 0.98 3.08 16 7 C -0.46 -0.32 8.56 113.37 0.97 0.65 16 8 C 0.56 1.23 6.60 86.71 0.57 1.80 16 9 O -0.55 -5.44 16.56 -4.00 -0.07 -5.50 16 10 C -0.15 -0.12 3.89 -20.35 -0.08 -0.20 16 11 C 0.13 -0.12 9.73 83.65 0.81 0.69 16 12 N -0.35 -0.71 2.93 -337.72 -0.99 -1.70 16 13 C -0.08 0.04 6.25 41.01 0.26 0.30 16 14 C -0.04 0.27 3.06 71.23 0.22 0.49 16 15 O -0.55 2.99 10.90 -148.98 -1.62 1.36 16 16 Si 1.01 -5.86 26.59 68.60 1.82 -4.04 16 17 H -0.27 0.68 7.11 99.48 0.71 1.38 16 18 H -0.24 1.51 6.84 99.48 0.68 2.19 16 19 H -0.26 0.85 7.11 99.48 0.71 1.55 16 20 C 0.03 0.06 10.44 83.68 0.87 0.94 16 21 N -0.50 -4.32 11.30 -194.11 -2.19 -6.52 16 22 C 0.22 1.51 7.59 134.19 1.02 2.53 16 23 C -0.07 -0.39 6.24 22.42 0.14 -0.25 16 24 Br 0.00 0.00 33.72 -20.37 -0.69 -0.69 16 25 C -0.03 -0.05 9.54 22.55 0.22 0.16 16 26 H 0.07 -0.76 8.14 -2.39 -0.02 -0.78 16 27 H 0.11 -1.35 7.17 -2.39 -0.02 -1.36 16 28 H 0.07 -0.59 7.00 -2.38 -0.02 -0.61 16 29 H 0.11 -1.15 7.89 -2.39 -0.02 -1.17 16 30 H 0.08 -0.08 7.18 -2.39 -0.02 -0.10 16 31 H 0.08 -0.76 7.96 -2.39 -0.02 -0.78 16 32 H 0.07 -0.40 7.96 -2.39 -0.02 -0.42 16 33 H 0.07 -0.51 7.61 -2.39 -0.02 -0.53 16 34 H 0.06 -0.20 7.96 -2.38 -0.02 -0.22 16 35 H 0.07 -0.27 7.96 -2.39 -0.02 -0.29 16 36 H 0.08 -0.52 7.96 -2.39 -0.02 -0.53 16 37 H 0.05 0.11 7.78 -2.39 -0.02 0.09 16 38 H 0.07 -0.01 7.96 -2.39 -0.02 -0.03 16 39 H 0.05 0.24 7.96 -2.39 -0.02 0.22 16 40 H 0.20 -0.92 6.69 -2.91 -0.02 -0.94 16 41 H 0.15 -1.38 7.96 -2.39 -0.02 -1.39 16 42 H 0.39 -3.60 8.70 -74.06 -0.64 -4.25 16 43 H 0.21 -0.67 6.71 -2.91 -0.02 -0.69 16 44 H 0.17 -0.07 8.06 -2.91 -0.02 -0.09 16 Total: 0.00 -19.72 387.47 5.40 -14.32 By element: Atomic # 1 Polarization: -9.86 SS G_CDS: 1.11 Total: -8.75 kcal Atomic # 6 Polarization: 7.88 SS G_CDS: 8.73 Total: 16.61 kcal Atomic # 7 Polarization: -2.96 SS G_CDS: -4.74 Total: -7.70 kcal Atomic # 8 Polarization: -2.45 SS G_CDS: -1.69 Total: -4.14 kcal Atomic # 14 Polarization: -12.33 SS G_CDS: 2.68 Total: -9.66 kcal Atomic # 35 Polarization: 0.00 SS G_CDS: -0.69 Total: -0.69 kcal Total: -19.72 5.40 -14.32 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_11678528_12335884.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 17.289 kcal (2) G-P(sol) polarization free energy of solvation -19.724 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -2.435 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 5.400 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.323 kcal (6) G-S(sol) free energy of system = (1) + (5) 2.966 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.84 seconds