Wall clock time and date at job start Thu Mar 4 2021 15:21:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46501 * 1 3 3 C 1.46497 * 120.00118 * 2 1 4 4 Si 1.86306 * 109.46984 * 270.00047 * 3 2 1 5 5 C 1.86292 * 109.47050 * 59.99890 * 4 3 2 6 6 C 1.86299 * 109.46809 * 179.97438 * 4 3 2 7 7 C 1.86291 * 109.46977 * 299.99968 * 4 3 2 8 8 C 1.34773 * 119.99868 * 179.97438 * 2 1 3 9 9 O 1.21565 * 119.99972 * 183.65443 * 8 2 1 10 10 C 1.47719 * 120.00119 * 3.66369 * 8 2 1 11 11 N 1.31800 * 126.51369 * 352.83394 * 10 8 2 12 12 N 1.28476 * 110.06884 * 179.97438 * 11 10 8 13 13 C 1.46504 * 124.88403 * 180.02562 * 12 11 10 14 14 C 1.35026 * 110.23448 * 0.02562 * 12 11 10 15 15 C 1.50698 * 126.38936 * 179.97438 * 14 12 11 16 16 O 1.42902 * 109.46903 * 30.00177 * 15 14 12 17 17 Si 1.86301 * 109.47016 * 149.99898 * 15 14 12 18 18 H 1.48497 * 109.47339 * 60.00470 * 17 15 14 19 19 H 1.48505 * 109.46976 * 179.97438 * 17 15 14 20 20 H 1.48496 * 109.47557 * 299.99975 * 17 15 14 21 21 C 1.35372 * 107.22698 * 0.24039 * 14 12 11 22 22 H 1.09008 * 109.47172 * 263.98670 * 1 2 3 23 23 H 1.09000 * 109.47254 * 23.98029 * 1 2 3 24 24 H 1.09000 * 109.47237 * 143.98795 * 1 2 3 25 25 H 1.09006 * 109.47140 * 30.00026 * 3 2 1 26 26 H 1.08997 * 109.47452 * 149.99900 * 3 2 1 27 27 H 1.09003 * 109.47579 * 60.00027 * 5 4 3 28 28 H 1.08997 * 109.47290 * 179.97438 * 5 4 3 29 29 H 1.09002 * 109.47480 * 300.00158 * 5 4 3 30 30 H 1.09005 * 109.46932 * 60.00465 * 6 4 3 31 31 H 1.09003 * 109.46882 * 179.97438 * 6 4 3 32 32 H 1.08995 * 109.47465 * 299.99539 * 6 4 3 33 33 H 1.09007 * 109.47593 * 59.99934 * 7 4 3 34 34 H 1.08997 * 109.47453 * 179.97438 * 7 4 3 35 35 H 1.09005 * 109.47522 * 299.99999 * 7 4 3 36 36 H 1.09002 * 109.47075 * 269.96267 * 13 12 11 37 37 H 1.09002 * 109.47132 * 29.95346 * 13 12 11 38 38 H 1.08992 * 109.47552 * 149.96017 * 13 12 11 39 39 H 1.08999 * 109.47055 * 269.99964 * 15 14 12 40 40 H 0.96697 * 113.99640 * 59.99953 * 16 15 14 41 41 H 1.07998 * 127.24942 * 179.75256 * 21 14 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1975 1.2687 0.0000 4 14 2.5080 1.8065 -1.7565 5 6 0.8802 2.0292 -2.6347 6 6 3.4389 3.4202 -1.7565 7 6 3.5148 0.5081 -2.6347 8 6 2.1388 -1.1672 0.0005 9 8 3.3526 -1.1682 0.0676 10 6 1.4025 -2.4452 -0.0807 11 7 0.0950 -2.6018 -0.0257 12 7 -0.2045 -3.8470 -0.1276 13 6 -1.5668 -4.3855 -0.1064 14 6 0.9168 -4.5880 -0.2571 15 6 0.9865 -6.0864 -0.4019 16 8 -0.1910 -6.5564 -1.0612 17 14 2.4862 -6.5439 -1.4082 18 1 3.7098 -6.0555 -0.7231 19 1 2.5552 -8.0205 -1.5504 20 1 2.3893 -5.9206 -2.7525 21 6 1.9671 -3.7345 -0.2265 22 1 -0.3634 -0.1077 1.0221 23 1 -0.3634 0.9389 -0.4177 24 1 -0.3634 -0.8313 -0.6042 25 1 1.6084 2.0284 0.5139 26 1 3.1499 1.1384 0.5138 27 1 0.2911 2.7889 -2.1209 28 1 1.0618 2.3443 -3.6622 29 1 0.3351 1.0853 -2.6347 30 1 4.3913 3.2902 -1.2425 31 1 3.6209 3.7347 -2.7842 32 1 2.8494 4.1797 -1.2429 33 1 2.9698 -0.4360 -2.6347 34 1 3.6961 0.8224 -3.6625 35 1 4.4672 0.3777 -2.1209 36 1 -1.8504 -4.6163 0.9205 37 1 -2.2559 -3.6470 -0.5162 38 1 -1.6079 -5.2938 -0.7076 39 1 1.0577 -6.5439 0.5849 40 1 -0.3188 -6.1897 -1.9468 41 1 3.0151 -3.9847 -0.3003 RHF calculation, no. of doubly occupied orbitals= 51 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_11678528_13259642.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 15:21:04 Heat of formation + Delta-G solvation = -13.095256 kcal Electronic energy + Delta-G solvation = -21533.982422 eV Core-core repulsion = 18382.153495 eV Total energy + Delta-G solvation = -3151.828927 eV No. of doubly occupied orbitals = 51 Molecular weight (most abundant/longest-lived isotopes) = 285.142 amu Computer time = 0.58 seconds Orbital eigenvalues (eV) -43.79192 -40.33763 -38.27806 -36.36320 -34.37260 -32.65585 -29.70541 -29.15771 -28.62587 -28.32391 -28.05038 -27.02534 -26.33197 -23.36802 -21.97978 -20.25058 -18.73513 -17.64865 -17.58971 -17.13385 -16.76605 -16.47803 -16.02574 -15.83379 -15.28361 -14.65058 -14.40525 -14.24953 -14.18583 -14.04209 -13.82651 -13.71724 -13.67408 -13.57984 -13.53542 -13.21485 -13.11905 -12.98532 -12.85530 -12.57124 -12.29750 -12.11272 -11.70318 -11.45630 -11.00342 -10.92736 -10.77860 -10.71649 -10.08826 -9.90725 -9.06994 0.58261 0.80073 1.11133 1.40397 1.41993 1.55974 1.68408 1.82247 1.88366 1.91655 2.28700 2.54377 2.69580 2.94846 3.29449 3.37465 3.88538 4.12005 4.24884 4.27937 4.34597 4.42429 4.50306 4.58465 4.66677 4.71091 4.72599 4.75382 4.76123 4.77364 4.90719 4.95621 4.99617 5.05659 5.33585 5.47095 5.53848 5.59748 5.72864 5.75194 6.11009 6.44012 6.88683 7.35406 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.069 3.931 2 N -0.586 5.586 3 C -0.179 4.179 4 Si 0.996 3.004 5 C -0.446 4.446 6 C -0.447 4.447 7 C -0.440 4.440 8 C 0.594 3.406 9 O -0.527 6.527 10 C -0.010 4.010 11 N -0.255 5.255 12 N -0.267 5.267 13 C 0.070 3.930 14 C -0.019 4.019 15 C -0.055 4.055 16 O -0.538 6.538 17 Si 0.969 3.031 18 H -0.243 1.243 19 H -0.247 1.247 20 H -0.248 1.248 21 C -0.181 4.181 22 H 0.056 0.944 23 H 0.072 0.928 24 H 0.096 0.904 25 H 0.084 0.916 26 H 0.094 0.906 27 H 0.068 0.932 28 H 0.069 0.931 29 H 0.068 0.932 30 H 0.071 0.929 31 H 0.071 0.929 32 H 0.069 0.931 33 H 0.063 0.937 34 H 0.064 0.936 35 H 0.073 0.927 36 H 0.084 0.916 37 H 0.092 0.908 38 H 0.120 0.880 39 H 0.129 0.871 40 H 0.380 0.620 41 H 0.166 0.834 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.410 -1.180 -1.591 4.834 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.074 4.074 2 N -0.318 5.318 3 C -0.348 4.348 4 Si 1.191 2.809 5 C -0.554 4.554 6 C -0.555 4.555 7 C -0.548 4.548 8 C 0.380 3.620 9 O -0.402 6.402 10 C -0.169 4.169 11 N -0.092 5.092 12 N -0.055 5.055 13 C -0.070 4.070 14 C -0.144 4.144 15 C -0.166 4.166 16 O -0.343 6.343 17 Si 0.788 3.212 18 H -0.166 1.166 19 H -0.170 1.170 20 H -0.171 1.171 21 C -0.209 4.209 22 H 0.074 0.926 23 H 0.090 0.910 24 H 0.114 0.886 25 H 0.102 0.898 26 H 0.112 0.888 27 H 0.087 0.913 28 H 0.089 0.911 29 H 0.087 0.913 30 H 0.090 0.910 31 H 0.090 0.910 32 H 0.088 0.912 33 H 0.083 0.917 34 H 0.083 0.917 35 H 0.092 0.908 36 H 0.102 0.898 37 H 0.111 0.889 38 H 0.138 0.862 39 H 0.147 0.853 40 H 0.228 0.772 41 H 0.183 0.817 Dipole moment (debyes) X Y Z Total from point charges -4.252 -1.188 -1.329 4.610 hybrid contribution 0.092 0.107 0.020 0.142 sum -4.160 -1.081 -1.309 4.493 Atomic orbital electron populations 1.22218 0.78483 1.03791 1.02892 1.47270 1.07359 1.04945 1.72259 1.26600 1.00941 0.87639 1.19591 0.79657 0.67669 0.67259 0.66286 1.26129 1.16631 1.04505 1.08096 1.26067 1.08626 1.16148 1.04653 1.26048 1.09604 1.11825 1.07329 1.16894 0.86206 0.81574 0.77334 1.90788 1.12663 1.86400 1.50313 1.21782 0.89661 0.95059 1.10400 1.73722 1.16194 0.99919 1.19359 1.45515 1.07763 1.03097 1.49109 1.22633 0.77346 1.01573 1.05430 1.21895 0.87086 0.96037 1.09366 1.24800 0.99358 0.87639 1.04803 1.86482 1.43144 1.70825 1.33893 0.85411 0.75376 0.81072 0.79324 1.16568 1.16992 1.17105 1.21535 0.99964 0.90568 1.08845 0.92582 0.90957 0.88554 0.89751 0.88752 0.91253 0.91140 0.91261 0.90989 0.91005 0.91178 0.91748 0.91667 0.90777 0.89752 0.88889 0.86225 0.85304 0.77199 0.81675 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 0.01 9.32 59.85 0.56 0.56 16 2 N -0.59 -1.24 2.37 -120.25 -0.29 -1.53 16 3 C -0.18 -0.11 4.64 59.85 0.28 0.17 16 4 Si 1.00 -0.84 12.44 -169.99 -2.11 -2.96 16 5 C -0.45 0.41 8.10 101.05 0.82 1.23 16 6 C -0.45 0.30 8.65 101.05 0.87 1.18 16 7 C -0.44 -0.74 8.47 101.05 0.86 0.12 16 8 C 0.59 2.76 7.22 -12.39 -0.09 2.67 16 9 O -0.53 -3.77 16.29 5.31 0.09 -3.68 16 10 C -0.01 -0.04 6.82 -82.76 -0.56 -0.60 16 11 N -0.25 -0.56 8.51 33.42 0.28 -0.28 16 12 N -0.27 -0.10 3.70 -63.85 -0.24 -0.34 16 13 C 0.07 -0.22 11.00 59.85 0.66 0.44 16 14 C -0.02 -0.01 6.17 -82.21 -0.51 -0.51 16 15 C -0.06 0.11 2.99 36.00 0.11 0.22 16 16 O -0.54 1.58 10.02 -35.23 -0.35 1.22 16 17 Si 0.97 -1.51 26.64 -169.99 -4.53 -6.04 16 18 H -0.24 0.12 6.87 56.52 0.39 0.51 16 19 H -0.25 0.17 7.11 56.52 0.40 0.57 16 20 H -0.25 0.17 7.11 56.52 0.40 0.57 16 21 C -0.18 -0.46 9.36 -39.36 -0.37 -0.83 16 22 H 0.06 0.02 8.14 -51.92 -0.42 -0.41 16 23 H 0.07 -0.13 7.23 -51.93 -0.38 -0.51 16 24 H 0.10 0.04 5.37 -51.93 -0.28 -0.24 16 25 H 0.08 -0.11 7.89 -51.93 -0.41 -0.52 16 26 H 0.09 0.18 7.19 -51.93 -0.37 -0.19 16 27 H 0.07 -0.11 7.96 -51.93 -0.41 -0.52 16 28 H 0.07 -0.06 7.96 -51.93 -0.41 -0.47 16 29 H 0.07 -0.04 7.63 -51.93 -0.40 -0.43 16 30 H 0.07 -0.03 7.96 -51.93 -0.41 -0.44 16 31 H 0.07 -0.05 7.96 -51.93 -0.41 -0.46 16 32 H 0.07 -0.09 7.96 -51.93 -0.41 -0.50 16 33 H 0.06 0.19 7.78 -51.92 -0.40 -0.21 16 34 H 0.06 0.06 7.96 -51.93 -0.41 -0.35 16 35 H 0.07 0.21 7.96 -51.93 -0.41 -0.21 16 36 H 0.08 -0.29 8.14 -51.93 -0.42 -0.71 16 37 H 0.09 -0.38 8.14 -51.93 -0.42 -0.81 16 38 H 0.12 -0.54 5.00 -51.93 -0.26 -0.80 16 39 H 0.13 -0.38 7.96 -51.93 -0.41 -0.80 16 40 H 0.38 -2.21 8.39 45.56 0.38 -1.83 16 41 H 0.17 0.32 6.87 -52.49 -0.36 -0.04 16 LS Contribution 335.30 15.07 5.05 5.05 Total: 0.00 -7.35 335.30 -5.34 -12.68 By element: Atomic # 1 Polarization: -2.92 SS G_CDS: -5.86 Total: -8.79 kcal Atomic # 6 Polarization: 2.03 SS G_CDS: 2.62 Total: 4.65 kcal Atomic # 7 Polarization: -1.91 SS G_CDS: -0.24 Total: -2.14 kcal Atomic # 8 Polarization: -2.19 SS G_CDS: -0.27 Total: -2.46 kcal Atomic # 14 Polarization: -2.36 SS G_CDS: -6.64 Total: -9.00 kcal Total LS contribution 5.05 Total: 5.05 kcal Total: -7.35 -5.34 -12.68 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_11678528_13259642.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -0.411 kcal (2) G-P(sol) polarization free energy of solvation -7.348 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -7.760 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.336 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -12.684 kcal (6) G-S(sol) free energy of system = (1) + (5) -13.095 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.58 seconds