Wall clock time and date at job start Thu Mar 4 2021 13:03:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52995 * 1 3 3 O 1.42906 * 109.47017 * 2 1 4 4 C 1.35902 * 116.99578 * 84.70446 * 3 2 1 5 5 C 1.38734 * 120.05617 * 174.63604 * 4 3 2 6 6 C 1.38144 * 119.94761 * 179.72767 * 5 4 3 7 7 C 1.38263 * 120.05121 * 0.25056 * 6 5 4 8 8 C 1.50702 * 119.94383 * 179.97438 * 7 6 5 9 9 O 1.42899 * 109.47167 * 300.00925 * 8 7 6 10 10 Si 1.86290 * 109.47540 * 180.02562 * 8 7 6 11 11 C 1.38261 * 120.11754 * 0.02562 * 7 6 5 12 12 C 1.38151 * 120.05164 * 359.97438 * 11 7 6 13 13 C 1.50703 * 109.46785 * 240.00705 * 2 1 3 14 14 O 1.21284 * 120.00253 * 120.00103 * 13 2 1 15 15 N 1.34773 * 119.99946 * 299.99227 * 13 2 1 16 16 C 1.46500 * 119.99956 * 180.02562 * 15 13 2 17 17 H 1.08991 * 112.84747 * 336.19858 * 16 15 13 18 18 C 1.53784 * 113.61468 * 107.50808 * 16 15 13 19 19 C 1.53781 * 87.08125 * 139.97861 * 18 16 15 20 20 H 1.08998 * 113.61499 * 89.11668 * 19 18 16 21 21 C 1.50704 * 113.61170 * 220.01800 * 19 18 16 22 22 N 1.34771 * 120.00092 * 277.49692 * 21 19 18 23 23 O 1.21286 * 119.99690 * 97.49873 * 21 19 18 24 24 C 1.53786 * 87.08245 * 334.56507 * 19 18 16 25 25 H 1.08995 * 109.47195 * 180.02562 * 1 2 3 26 26 H 1.09007 * 109.46713 * 299.99634 * 1 2 3 27 27 H 1.09004 * 109.47516 * 59.99500 * 1 2 3 28 28 H 1.08991 * 109.47357 * 120.00284 * 2 1 3 29 29 H 1.07999 * 120.02566 * 0.02562 * 5 4 3 30 30 H 1.07997 * 119.97270 * 180.23339 * 6 5 4 31 31 H 1.09007 * 109.46983 * 59.99664 * 8 7 6 32 32 H 0.96699 * 114.00365 * 179.97438 * 9 8 7 33 33 H 1.48503 * 110.00198 * 298.68390 * 10 8 7 34 34 H 1.48500 * 109.99897 * 60.00105 * 10 8 7 35 35 H 1.07999 * 119.97520 * 179.97438 * 11 7 6 36 36 H 1.08007 * 120.02409 * 180.02562 * 12 11 7 37 37 H 0.97003 * 119.99754 * 0.02562 * 15 13 2 38 38 H 1.08994 * 113.61496 * 254.52857 * 18 16 15 39 39 H 1.08999 * 113.61460 * 25.43105 * 18 16 15 40 40 H 0.97006 * 119.99854 * 0.02562 * 22 21 19 41 41 H 0.96996 * 120.00240 * 180.02562 * 22 21 19 42 42 H 1.08997 * 113.61233 * 270.88446 * 24 19 18 43 43 H 1.08996 * 113.61449 * 139.97974 * 24 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0063 1.3473 0.0000 4 6 2.1065 1.9662 1.2058 5 6 2.6655 3.2330 1.2923 6 6 2.7611 3.8623 2.5183 7 6 2.3051 3.2286 3.6593 8 6 2.4112 3.9171 4.9957 9 8 3.7834 4.1965 5.2800 10 14 1.7159 2.8092 6.3221 11 6 1.7529 1.9637 3.5767 12 6 1.6550 1.3301 2.3530 13 6 2.0322 -0.7103 -1.2306 14 8 2.7295 -0.1208 -2.0289 15 7 1.7067 -2.0006 -1.4439 16 6 2.1954 -2.6912 -2.6399 17 1 2.4390 -2.0079 -3.4534 18 6 3.2980 -3.7228 -2.3483 19 6 2.6148 -4.6296 -3.3854 20 1 2.9742 -4.4770 -4.4030 21 6 2.5802 -6.0827 -2.9872 22 7 3.6551 -6.8664 -3.2033 23 8 1.5850 -6.5467 -2.4721 24 6 1.3125 -3.8739 -3.0722 25 1 -0.3633 -1.0276 0.0005 26 1 -0.3633 0.5138 0.8901 27 1 -0.3634 0.5139 -0.8899 28 1 1.8933 -0.5138 0.8899 29 1 3.0211 3.7288 0.4011 30 1 3.1927 4.8501 2.5856 31 1 1.8484 4.8503 4.9693 32 1 3.9272 4.6408 6.1267 33 1 0.2807 2.5365 6.0554 34 1 2.4751 1.5338 6.3682 35 1 1.3978 1.4706 4.4695 36 1 1.2231 0.3422 2.2889 37 1 1.1488 -2.4720 -0.8055 38 1 4.2937 -3.3933 -2.6449 39 1 3.2673 -4.1197 -1.3336 40 1 4.4512 -6.4951 -3.6149 41 1 3.6327 -7.8017 -2.9474 42 1 0.7391 -4.3122 -2.2554 43 1 0.7054 -3.6664 -3.9533 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_11684966_10157680.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:03:44 Heat of formation + Delta-G solvation = -90.250764 kcal Electronic energy + Delta-G solvation = -26346.035956 eV Core-core repulsion = 22358.913523 eV Total energy + Delta-G solvation = -3987.122433 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 321.145 amu Computer time = 0.93 seconds Orbital eigenvalues (eV) -42.01252 -41.43565 -40.48860 -39.18506 -38.39472 -37.22085 -35.02811 -34.58663 -33.17211 -32.01981 -31.67634 -27.52730 -26.79316 -26.68146 -25.37156 -24.29179 -22.69732 -22.01658 -21.58224 -20.52630 -19.66089 -18.71399 -18.50561 -18.28619 -17.87431 -17.35406 -16.95824 -16.81304 -16.51708 -16.45007 -15.89637 -15.81332 -15.58488 -15.34955 -15.21643 -14.70248 -14.48794 -14.34367 -13.95664 -13.82087 -13.65391 -13.57150 -13.45094 -13.40299 -12.99083 -12.49692 -12.44290 -12.28543 -12.24994 -12.00395 -11.86518 -11.75979 -11.06941 -10.91951 -10.69597 -10.29530 -10.22770 -10.19862 -9.32971 -4.92851 0.10029 0.14819 1.28478 1.32119 1.40634 1.55869 1.65036 1.97091 2.35632 2.49112 2.65209 3.30731 3.33967 3.39486 3.43154 3.53836 3.62492 3.63876 3.71124 3.78575 3.83162 3.93147 4.10618 4.20881 4.25262 4.38274 4.47574 4.50461 4.54525 4.60670 4.61925 4.67294 4.79660 4.83747 4.93278 4.98234 5.03818 5.05785 5.07739 5.35104 5.40344 5.55426 5.84671 6.13031 6.33841 6.42562 6.92878 6.98713 7.29810 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.173 4.173 2 C 0.060 3.940 3 O -0.307 6.307 4 C 0.122 3.878 5 C -0.159 4.159 6 C -0.054 4.054 7 C -0.128 4.128 8 C -0.076 4.076 9 O -0.566 6.566 10 Si 0.773 3.227 11 C -0.098 4.098 12 C -0.204 4.204 13 C 0.521 3.479 14 O -0.564 6.564 15 N -0.699 5.699 16 C 0.121 3.879 17 H 0.112 0.888 18 C -0.129 4.129 19 C -0.130 4.130 20 H 0.144 0.856 21 C 0.525 3.475 22 N -0.839 5.839 23 O -0.593 6.593 24 C -0.120 4.120 25 H 0.109 0.891 26 H 0.082 0.918 27 H 0.065 0.935 28 H 0.121 0.879 29 H 0.138 0.862 30 H 0.147 0.853 31 H 0.094 0.906 32 H 0.403 0.597 33 H -0.285 1.285 34 H -0.297 1.297 35 H 0.125 0.875 36 H 0.156 0.844 37 H 0.418 0.582 38 H 0.091 0.909 39 H 0.088 0.912 40 H 0.418 0.582 41 H 0.405 0.595 42 H 0.094 0.906 43 H 0.090 0.910 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.148 -0.875 3.449 3.561 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.230 4.230 2 C 0.001 3.999 3 O -0.220 6.220 4 C 0.077 3.923 5 C -0.178 4.178 6 C -0.072 4.072 7 C -0.129 4.129 8 C -0.186 4.186 9 O -0.376 6.376 10 Si 0.679 3.321 11 C -0.115 4.115 12 C -0.222 4.222 13 C 0.306 3.694 14 O -0.442 6.442 15 N -0.352 5.352 16 C 0.016 3.984 17 H 0.130 0.870 18 C -0.168 4.168 19 C -0.152 4.152 20 H 0.162 0.838 21 C 0.310 3.690 22 N -0.402 5.402 23 O -0.473 6.473 24 C -0.158 4.158 25 H 0.127 0.873 26 H 0.101 0.899 27 H 0.084 0.916 28 H 0.139 0.861 29 H 0.156 0.844 30 H 0.165 0.835 31 H 0.111 0.889 32 H 0.254 0.746 33 H -0.213 1.213 34 H -0.225 1.225 35 H 0.143 0.857 36 H 0.173 0.827 37 H 0.255 0.745 38 H 0.110 0.890 39 H 0.107 0.893 40 H 0.249 0.751 41 H 0.236 0.764 42 H 0.113 0.887 43 H 0.108 0.892 Dipole moment (debyes) X Y Z Total from point charges -0.296 -1.533 2.593 3.027 hybrid contribution 0.187 -0.581 -0.471 0.772 sum -0.109 -2.115 2.121 2.997 Atomic orbital electron populations 1.22378 0.90470 1.05722 1.04477 1.22453 0.97268 0.82173 0.98032 1.86192 1.81433 1.26929 1.27485 1.19177 0.95848 0.93119 0.84162 1.20743 1.03566 0.93992 0.99485 1.21010 0.95713 1.00315 0.90171 1.19680 1.02479 0.95181 0.95526 1.24796 0.88352 1.06198 0.99247 1.86442 1.23156 1.82810 1.45147 0.94348 0.75495 0.77788 0.84451 1.20850 0.99038 0.94308 0.97333 1.21378 1.06704 1.02509 0.91656 1.20419 0.79655 0.82498 0.86793 1.90744 1.38761 1.66970 1.47677 1.45758 1.53264 1.10482 1.25714 1.22554 0.95522 0.92147 0.88180 0.87024 1.23374 0.99642 0.94646 0.99102 1.22597 1.00241 0.89438 1.02899 0.83784 1.20738 0.82382 0.89147 0.76731 1.43826 1.17387 1.14459 1.64486 1.90742 1.34315 1.76488 1.45784 1.23227 0.95989 0.93312 1.03293 0.87273 0.89922 0.91609 0.86130 0.84420 0.83485 0.88857 0.74590 1.21263 1.22487 0.85739 0.82659 0.74456 0.88995 0.89349 0.75088 0.76397 0.88740 0.89168 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 0.63 9.06 71.98 0.65 1.28 16 2 C 0.06 0.09 2.65 29.85 0.08 0.16 16 3 O -0.31 -2.77 9.33 -73.41 -0.69 -3.46 16 4 C 0.12 0.92 6.60 22.51 0.15 1.07 16 5 C -0.16 -1.20 9.99 22.37 0.22 -0.98 16 6 C -0.05 -0.31 9.60 22.25 0.21 -0.10 16 7 C -0.13 -0.70 5.42 -19.85 -0.11 -0.81 16 8 C -0.08 0.02 2.81 71.24 0.20 0.22 16 9 O -0.57 -0.05 12.74 -148.98 -1.90 -1.95 16 10 Si 0.77 -1.82 29.78 68.60 2.04 0.22 16 11 C -0.10 -0.52 8.66 22.25 0.19 -0.33 16 12 C -0.20 -0.84 8.24 22.37 0.18 -0.66 16 13 C 0.52 2.48 7.23 87.66 0.63 3.11 16 14 O -0.56 -8.32 16.10 15.99 0.26 -8.07 16 15 N -0.70 1.58 5.25 -440.03 -2.31 -0.72 16 16 C 0.12 -0.28 4.24 45.52 0.19 -0.08 16 17 H 0.11 0.07 7.46 -2.39 -0.02 0.05 16 18 C -0.13 0.59 7.43 31.12 0.23 0.82 16 19 C -0.13 0.65 4.15 -11.01 -0.05 0.60 16 20 H 0.14 -1.38 8.14 -2.39 -0.02 -1.40 16 21 C 0.52 0.13 7.63 87.66 0.67 0.80 16 22 N -0.84 5.22 8.87 -173.53 -1.54 3.68 16 23 O -0.59 -5.96 16.74 -3.05 -0.05 -6.01 16 24 C -0.12 0.41 7.16 31.12 0.22 0.63 16 25 H 0.11 -1.05 7.56 -2.39 -0.02 -1.07 16 26 H 0.08 -0.33 6.91 -2.38 -0.02 -0.35 16 27 H 0.06 -0.03 8.14 -2.39 -0.02 -0.05 16 28 H 0.12 -0.40 6.31 -2.39 -0.02 -0.41 16 29 H 0.14 0.87 8.06 -2.91 -0.02 0.84 16 30 H 0.15 0.37 8.06 -2.91 -0.02 0.35 16 31 H 0.09 -0.41 7.96 -2.38 -0.02 -0.42 16 32 H 0.40 -4.26 8.74 -74.06 -0.65 -4.90 16 33 H -0.29 -0.69 7.11 99.48 0.71 0.01 16 34 H -0.30 -1.52 7.11 99.48 0.71 -0.81 16 35 H 0.13 0.44 4.87 -2.91 -0.01 0.42 16 36 H 0.16 -0.29 5.43 -2.91 -0.02 -0.31 16 37 H 0.42 -3.31 8.15 -92.71 -0.76 -4.06 16 38 H 0.09 -0.51 8.14 -2.39 -0.02 -0.53 16 39 H 0.09 -0.32 8.09 -2.39 -0.02 -0.34 16 40 H 0.42 -5.11 8.83 -92.70 -0.82 -5.93 16 41 H 0.41 -2.63 8.93 -92.71 -0.83 -3.45 16 42 H 0.09 -0.12 7.41 -2.39 -0.02 -0.14 16 43 H 0.09 -0.39 8.14 -2.39 -0.02 -0.41 16 Total: 0.00 -31.05 359.24 -2.41 -33.46 By element: Atomic # 1 Polarization: -20.98 SS G_CDS: -1.91 Total: -22.90 kcal Atomic # 6 Polarization: 2.06 SS G_CDS: 3.69 Total: 5.75 kcal Atomic # 7 Polarization: 6.80 SS G_CDS: -3.85 Total: 2.95 kcal Atomic # 8 Polarization: -17.10 SS G_CDS: -2.38 Total: -19.48 kcal Atomic # 14 Polarization: -1.82 SS G_CDS: 2.04 Total: 0.22 kcal Total: -31.05 -2.41 -33.46 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_11684966_10157680.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -56.792 kcal (2) G-P(sol) polarization free energy of solvation -31.053 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -87.845 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.406 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.459 kcal (6) G-S(sol) free energy of system = (1) + (5) -90.251 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.93 seconds