Wall clock time and date at job start Thu Mar 4 2021 13:03:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46493 * 1 3 3 C 1.35536 * 125.68150 * 2 1 4 4 C 1.35447 * 108.87565 * 180.30647 * 3 2 1 5 5 C 1.50702 * 126.06910 * 179.69926 * 4 3 2 6 6 O 1.42897 * 109.46892 * 245.03859 * 5 4 3 7 7 Si 1.86298 * 109.46985 * 5.03908 * 5 4 3 8 8 C 1.39835 * 107.86410 * 359.73040 * 4 3 2 9 9 C 1.37649 * 125.68092 * 179.84641 * 2 1 3 10 10 C 1.46683 * 126.23050 * 359.96111 * 9 2 1 11 11 O 1.21694 * 119.99882 * 3.98258 * 10 9 2 12 12 N 1.34774 * 120.00117 * 183.97257 * 10 9 2 13 13 C 1.46496 * 120.00260 * 174.28762 * 12 10 9 14 14 H 1.09000 * 112.90656 * 23.75625 * 13 12 10 15 15 C 1.53778 * 113.61562 * 155.00471 * 13 12 10 16 16 C 1.53778 * 87.17397 * 140.02530 * 15 13 12 17 17 H 1.09003 * 113.61806 * 89.07318 * 16 15 13 18 18 C 1.50701 * 113.61921 * 219.89038 * 16 15 13 19 19 N 1.34768 * 120.00187 * 179.97438 * 18 16 15 20 20 O 1.21283 * 119.99265 * 0.02562 * 18 16 15 21 21 C 1.53779 * 87.08204 * 334.52533 * 16 15 13 22 22 H 1.08999 * 109.47413 * 264.45323 * 1 2 3 23 23 H 1.09005 * 109.47407 * 24.45703 * 1 2 3 24 24 H 1.08997 * 109.47230 * 144.45513 * 1 2 3 25 25 H 1.08002 * 125.55903 * 0.02562 * 3 2 1 26 26 H 1.09000 * 109.47156 * 125.03792 * 5 4 3 27 27 H 0.96702 * 113.99786 * 180.02562 * 6 5 4 28 28 H 1.48502 * 110.00099 * 178.68465 * 7 5 4 29 29 H 1.48506 * 109.99926 * 299.99935 * 7 5 4 30 30 H 1.08000 * 126.46007 * 179.97438 * 8 4 3 31 31 H 0.96999 * 120.00124 * 354.30099 * 12 10 9 32 32 H 1.09003 * 113.61403 * 25.43733 * 15 13 12 33 33 H 1.09002 * 113.61517 * 254.61483 * 15 13 12 34 34 H 0.97000 * 120.00478 * 0.02562 * 19 18 16 35 35 H 0.97009 * 119.99748 * 180.02562 * 19 18 16 36 36 H 1.09008 * 113.61528 * 139.97925 * 21 16 15 37 37 H 1.08998 * 113.61557 * 270.79869 * 21 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4649 0.0000 0.0000 3 6 2.2555 1.1009 0.0000 4 6 3.5521 0.7093 -0.0069 5 6 4.7536 1.6189 -0.0156 6 8 5.4694 1.4507 -1.2409 7 14 4.1936 3.3890 0.1386 8 6 3.5779 -0.6888 -0.0051 9 6 2.2678 -1.1181 0.0030 10 6 1.8124 -2.5124 0.0075 11 8 0.6240 -2.7646 -0.0642 12 7 2.7100 -3.5143 0.0910 13 6 2.2516 -4.8995 0.2217 14 1 1.2424 -5.0504 -0.1616 15 6 3.2664 -5.9351 -0.2907 16 6 2.8788 -6.8011 0.9196 17 1 2.0408 -7.4709 0.7268 18 6 4.0497 -7.4989 1.5624 19 7 3.8558 -8.2915 2.6350 20 8 5.1666 -7.3463 1.1150 21 6 2.4744 -5.4957 1.6246 22 1 -0.3634 -0.0993 1.0228 23 1 -0.3634 0.9355 -0.4255 24 1 -0.3633 -0.8361 -0.5974 25 1 1.9082 2.1236 0.0004 26 1 5.4043 1.3694 0.8225 27 1 6.2572 2.0064 -1.3157 28 1 5.3708 4.2939 0.1631 29 1 3.3056 3.7416 -0.9983 30 1 4.4583 -1.3144 -0.0096 31 1 3.6596 -3.3181 0.0647 32 1 4.2984 -5.5852 -0.2646 33 1 2.9933 -6.3769 -1.2490 34 1 2.9626 -8.4132 2.9931 35 1 4.6096 -8.7403 3.0490 36 1 1.5606 -5.5819 2.2127 37 1 3.2895 -5.0263 2.1755 There are 51 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 51 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_11684966_10803934.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:03:53 Heat of formation + Delta-G solvation = -33.236010 kcal Electronic energy + Delta-G solvation = -21590.275412 eV Core-core repulsion = 18142.645365 eV Total energy + Delta-G solvation = -3447.630047 eV No. of doubly occupied orbitals = 51 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 280.126 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -42.56003 -41.46367 -40.10254 -38.41644 -37.76810 -34.94993 -34.54856 -33.78400 -30.97866 -28.41736 -27.23846 -26.74540 -25.63058 -23.97910 -22.02466 -21.22265 -20.78966 -20.10164 -18.64478 -18.55939 -18.39046 -17.84731 -17.18615 -16.69526 -16.60914 -16.36091 -15.76014 -15.64925 -15.28112 -15.18114 -14.91755 -14.54383 -14.30742 -14.02360 -13.57900 -13.55484 -13.42884 -13.22335 -13.11831 -12.51599 -12.41788 -12.25263 -11.92722 -11.70890 -11.15932 -10.94110 -10.67068 -10.35419 -10.17226 -9.69465 -9.27411 -4.86683 0.37665 1.36061 1.52728 1.54694 1.59831 1.68499 2.02557 2.24856 2.28172 2.68567 3.36763 3.42143 3.55752 3.66022 3.75588 3.87534 3.93921 3.99675 4.15130 4.25628 4.38441 4.40925 4.53774 4.62236 4.65809 4.70932 4.72681 4.77466 4.88731 4.96190 5.11029 5.18884 5.45998 5.66141 5.87446 5.88103 6.15144 6.41950 6.46105 6.70661 7.07194 7.33179 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.065 3.935 2 N -0.412 5.412 3 C 0.034 3.966 4 C -0.182 4.182 5 C -0.051 4.051 6 O -0.562 6.562 7 Si 0.767 3.233 8 C -0.116 4.116 9 C -0.079 4.079 10 C 0.591 3.409 11 O -0.578 6.578 12 N -0.700 5.700 13 C 0.123 3.877 14 H 0.117 0.883 15 C -0.125 4.125 16 C -0.128 4.128 17 H 0.147 0.853 18 C 0.524 3.476 19 N -0.838 5.838 20 O -0.595 6.595 21 C -0.125 4.125 22 H 0.087 0.913 23 H 0.112 0.888 24 H 0.083 0.917 25 H 0.198 0.802 26 H 0.088 0.912 27 H 0.391 0.609 28 H -0.291 1.291 29 H -0.294 1.294 30 H 0.154 0.846 31 H 0.413 0.587 32 H 0.088 0.912 33 H 0.088 0.912 34 H 0.418 0.582 35 H 0.405 0.595 36 H 0.097 0.903 37 H 0.085 0.915 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.662 0.441 5.456 6.087 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 N -0.084 5.084 3 C -0.103 4.103 4 C -0.188 4.188 5 C -0.160 4.160 6 O -0.371 6.371 7 Si 0.672 3.328 8 C -0.142 4.142 9 C -0.192 4.192 10 C 0.381 3.619 11 O -0.460 6.460 12 N -0.350 5.350 13 C 0.019 3.981 14 H 0.135 0.865 15 C -0.163 4.163 16 C -0.150 4.150 17 H 0.165 0.835 18 C 0.309 3.691 19 N -0.401 5.401 20 O -0.475 6.475 21 C -0.164 4.164 22 H 0.105 0.895 23 H 0.130 0.870 24 H 0.102 0.898 25 H 0.215 0.785 26 H 0.105 0.895 27 H 0.241 0.759 28 H -0.218 1.218 29 H -0.222 1.222 30 H 0.172 0.828 31 H 0.250 0.750 32 H 0.107 0.893 33 H 0.106 0.894 34 H 0.250 0.750 35 H 0.236 0.764 36 H 0.115 0.885 37 H 0.104 0.896 Dipole moment (debyes) X Y Z Total from point charges -3.788 0.762 4.558 5.976 hybrid contribution 1.537 -0.412 -0.511 1.672 sum -2.251 0.349 4.047 4.644 Atomic orbital electron populations 1.22414 0.74540 1.05728 1.04874 1.44004 1.07749 1.04630 1.51968 1.22240 0.89806 0.92528 1.05776 1.18895 0.93067 0.94010 1.12847 1.24305 0.93681 1.09507 0.88518 1.86567 1.44077 1.67363 1.39125 0.94367 0.80568 0.71475 0.86393 1.21426 0.94513 0.95193 1.03068 1.20095 0.90804 0.87803 1.20461 1.17133 0.85425 0.84108 0.75283 1.90768 1.17336 1.85322 1.52607 1.45579 1.09989 1.05787 1.73623 1.22603 0.99822 0.78672 0.97023 0.86496 1.23235 0.99865 0.94990 0.98242 1.22585 0.97562 0.96947 0.97890 0.83522 1.20761 0.89983 0.78182 0.80130 1.43810 1.14920 1.49439 1.31916 1.90746 1.27417 1.64595 1.64763 1.23405 1.03053 0.93075 0.96881 0.89451 0.86989 0.89822 0.78541 0.89455 0.75888 1.21765 1.22162 0.82794 0.75049 0.89320 0.89361 0.75027 0.76414 0.88455 0.89631 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.03 10.47 127.77 1.34 1.30 16 2 N -0.41 -1.54 3.16 -534.33 -1.69 -3.23 16 3 C 0.03 0.05 9.92 83.48 0.83 0.87 16 4 C -0.18 -0.60 5.46 -20.12 -0.11 -0.71 16 5 C -0.05 -0.01 3.01 71.24 0.21 0.21 16 6 O -0.56 -1.95 12.86 -148.98 -1.92 -3.86 16 7 Si 0.77 -1.96 30.60 68.60 2.10 0.14 16 8 C -0.12 -0.50 10.29 22.57 0.23 -0.27 16 9 C -0.08 -0.47 6.89 40.35 0.28 -0.19 16 10 C 0.59 4.03 7.77 86.45 0.67 4.70 16 11 O -0.58 -6.85 14.36 -4.33 -0.06 -6.91 16 12 N -0.70 -0.98 5.34 -443.57 -2.37 -3.35 16 13 C 0.12 -0.11 4.29 45.61 0.20 0.08 16 14 H 0.12 0.09 7.41 -2.39 -0.02 0.07 16 15 C -0.12 0.16 7.15 31.12 0.22 0.38 16 16 C -0.13 0.53 4.15 -11.01 -0.05 0.49 16 17 H 0.15 -1.39 8.14 -2.39 -0.02 -1.41 16 18 C 0.52 0.62 7.63 87.66 0.67 1.29 16 19 N -0.84 4.88 8.87 -173.54 -1.54 3.34 16 20 O -0.59 -6.87 16.74 -3.04 -0.05 -6.92 16 21 C -0.13 0.51 7.44 31.21 0.23 0.74 16 22 H 0.09 -0.19 8.14 -2.39 -0.02 -0.21 16 23 H 0.11 -0.69 8.12 -2.38 -0.02 -0.71 16 24 H 0.08 0.31 6.57 -2.39 -0.02 0.29 16 25 H 0.20 -0.96 6.21 -2.91 -0.02 -0.97 16 26 H 0.09 -0.28 7.96 -2.39 -0.02 -0.30 16 27 H 0.39 -1.79 8.74 -74.06 -0.65 -2.44 16 28 H -0.29 -0.61 7.11 99.48 0.71 0.09 16 29 H -0.29 -1.16 7.11 99.48 0.71 -0.45 16 30 H 0.15 0.14 7.45 -2.91 -0.02 0.12 16 31 H 0.41 -0.63 7.63 -92.71 -0.71 -1.34 16 32 H 0.09 0.18 7.41 -2.39 -0.02 0.16 16 33 H 0.09 -0.19 8.14 -2.39 -0.02 -0.21 16 34 H 0.42 -5.11 8.83 -92.71 -0.82 -5.93 16 35 H 0.40 -2.46 8.93 -92.70 -0.83 -3.28 16 36 H 0.10 -0.61 8.14 -2.38 -0.02 -0.63 16 37 H 0.09 -0.20 8.10 -2.39 -0.02 -0.22 16 Total: 0.00 -26.65 316.54 -2.61 -29.26 By element: Atomic # 1 Polarization: -15.55 SS G_CDS: -1.81 Total: -17.37 kcal Atomic # 6 Polarization: 4.17 SS G_CDS: 4.73 Total: 8.90 kcal Atomic # 7 Polarization: 2.36 SS G_CDS: -5.60 Total: -3.24 kcal Atomic # 8 Polarization: -15.67 SS G_CDS: -2.03 Total: -17.69 kcal Atomic # 14 Polarization: -1.96 SS G_CDS: 2.10 Total: 0.14 kcal Total: -26.65 -2.61 -29.26 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_11684966_10803934.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -3.972 kcal (2) G-P(sol) polarization free energy of solvation -26.649 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -30.621 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.615 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.264 kcal (6) G-S(sol) free energy of system = (1) + (5) -33.236 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds