Wall clock time and date at job start Thu Mar 4 2021 13:03:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46500 * 1 3 3 C 1.37655 * 125.67383 * 2 1 4 4 C 1.46682 * 126.23313 * 0.26554 * 3 2 1 5 5 O 1.21687 * 120.00048 * 5.39645 * 4 3 2 6 6 N 1.34783 * 119.99783 * 185.38868 * 4 3 2 7 7 C 1.46500 * 119.99609 * 185.06666 * 6 4 3 8 8 H 1.08998 * 112.85124 * 336.19398 * 7 6 4 9 9 C 1.53775 * 113.61327 * 107.50268 * 7 6 4 10 10 C 1.53787 * 87.07901 * 139.97999 * 9 7 6 11 11 H 1.08995 * 113.61485 * 89.12070 * 10 9 7 12 12 C 1.50699 * 113.68891 * 220.00951 * 10 9 7 13 13 N 1.34782 * 120.00074 * 277.53101 * 12 10 9 14 14 O 1.21286 * 120.00007 * 97.53704 * 12 10 9 15 15 C 1.53781 * 113.61158 * 205.00334 * 7 6 4 16 16 C 1.37875 * 107.53578 * 180.26833 * 3 2 1 17 17 C 1.39840 * 107.08348 * 359.97438 * 16 3 2 18 18 C 1.35459 * 107.86237 * 0.02562 * 17 16 3 19 19 C 1.50699 * 125.55812 * 180.02562 * 18 17 16 20 20 O 1.42901 * 109.47070 * 209.97473 * 19 18 17 21 21 Si 1.86296 * 109.47534 * 329.97760 * 19 18 17 22 22 H 1.09004 * 109.46652 * 263.84659 * 1 2 3 23 23 H 1.08996 * 109.47642 * 23.85187 * 1 2 3 24 24 H 1.09005 * 109.46826 * 143.85688 * 1 2 3 25 25 H 0.96991 * 119.99993 * 5.06762 * 6 4 3 26 26 H 1.08997 * 113.61992 * 254.52761 * 9 7 6 27 27 H 1.08998 * 113.61807 * 25.43625 * 9 7 6 28 28 H 0.96999 * 119.99731 * 0.02562 * 13 12 10 29 29 H 0.97000 * 120.00226 * 180.02562 * 13 12 10 30 30 H 1.08998 * 113.61555 * 334.56616 * 15 7 6 31 31 H 1.09003 * 113.61568 * 105.38840 * 15 7 6 32 32 H 1.07997 * 126.45740 * 180.02562 * 16 3 2 33 33 H 1.07997 * 126.06443 * 179.97438 * 17 16 3 34 34 H 1.09003 * 109.46596 * 89.98003 * 19 18 17 35 35 H 0.96699 * 113.99759 * 60.00589 * 20 19 18 36 36 H 1.48502 * 109.99889 * 179.97438 * 21 19 18 37 37 H 1.48498 * 109.99893 * 301.31607 * 21 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2678 1.1182 0.0000 4 6 1.8122 2.5125 0.0055 5 8 0.6264 2.7648 0.1097 6 7 2.7072 3.5143 -0.1048 7 6 2.2663 4.9065 0.0120 8 1 1.2105 5.0374 -0.2253 9 6 2.6920 5.5791 1.3276 10 6 2.9804 6.8411 0.4975 11 1 2.1198 7.5020 0.3942 12 6 4.2306 7.5699 0.9182 13 7 4.1947 8.4232 1.9608 14 8 5.2691 7.3887 0.3184 15 6 3.1877 5.9066 -0.7061 16 6 3.5780 0.6890 -0.0062 17 6 3.5523 -0.7091 -0.0093 18 6 2.2555 -1.1008 -0.0056 19 6 1.7711 -2.5278 -0.0067 20 8 0.5106 -2.6025 -0.6757 21 14 3.0085 -3.6032 -0.8916 22 1 -0.3633 -0.1102 1.0218 23 1 -0.3634 0.9398 -0.4155 24 1 -0.3633 -0.8299 -0.6062 25 1 3.6431 3.3134 -0.2615 26 1 1.8757 5.7019 2.0394 27 1 3.5825 5.1381 1.7754 28 1 3.3643 8.5679 2.4407 29 1 4.9993 8.8926 2.2314 30 1 4.2137 5.5551 -0.8144 31 1 2.7720 6.2927 -1.6369 32 1 4.4583 1.3147 -0.0074 33 1 4.4134 -1.3609 -0.0146 34 1 1.6582 -2.8738 1.0208 35 1 0.5363 -2.3093 -1.5968 36 1 2.5426 -5.0132 -0.8990 37 1 3.1952 -3.1222 -2.2841 There are 51 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 51 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_11684966_10803936.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:03:57 Heat of formation + Delta-G solvation = -33.085949 kcal Electronic energy + Delta-G solvation = -21720.654530 eV Core-core repulsion = 18273.030990 eV Total energy + Delta-G solvation = -3447.623540 eV No. of doubly occupied orbitals = 51 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 280.126 amu Computer time = 0.71 seconds Orbital eigenvalues (eV) -42.61641 -41.48615 -40.14678 -38.44776 -37.92096 -34.93269 -34.52982 -33.62609 -31.37345 -27.90289 -27.45059 -26.75900 -26.21365 -23.42838 -22.15427 -21.41325 -20.87001 -20.22229 -18.83654 -18.56853 -18.15643 -17.84093 -16.97008 -16.95931 -16.43405 -16.15782 -16.08864 -15.54878 -15.43610 -15.13547 -14.90859 -14.54161 -14.38102 -14.24711 -13.81853 -13.55639 -13.43331 -13.20890 -12.95010 -12.43750 -12.36119 -12.24804 -11.94977 -11.71435 -11.24797 -10.96157 -10.80388 -10.66456 -10.17226 -9.74695 -9.10824 -4.86741 0.34116 1.16993 1.53568 1.59383 1.73281 1.75663 2.01407 2.28744 2.32404 2.69116 3.14572 3.36697 3.42294 3.56369 3.67462 3.77548 3.87200 3.97068 4.25101 4.29711 4.35195 4.48556 4.53194 4.54897 4.65560 4.69430 4.71935 4.87990 4.96531 5.07622 5.11914 5.18586 5.46662 5.72741 5.88023 5.98004 6.13041 6.29528 6.44384 6.46587 7.08535 7.33239 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.060 3.940 2 N -0.406 5.406 3 C -0.086 4.086 4 C 0.588 3.412 5 O -0.585 6.585 6 N -0.696 5.696 7 C 0.123 3.877 8 H 0.113 0.887 9 C -0.126 4.126 10 C -0.129 4.129 11 H 0.145 0.855 12 C 0.525 3.475 13 N -0.839 5.839 14 O -0.593 6.593 15 C -0.122 4.122 16 C -0.128 4.128 17 C -0.202 4.202 18 C 0.007 3.993 19 C -0.066 4.066 20 O -0.546 6.546 21 Si 0.815 3.185 22 H 0.069 0.931 23 H 0.085 0.915 24 H 0.111 0.889 25 H 0.415 0.585 26 H 0.093 0.907 27 H 0.087 0.913 28 H 0.418 0.582 29 H 0.405 0.595 30 H 0.092 0.908 31 H 0.088 0.912 32 H 0.172 0.828 33 H 0.184 0.816 34 H 0.131 0.869 35 H 0.386 0.614 36 H -0.297 1.297 37 H -0.290 1.290 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.912 0.859 2.616 3.352 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.081 4.081 2 N -0.080 5.080 3 C -0.199 4.199 4 C 0.378 3.622 5 O -0.467 6.467 6 N -0.347 5.347 7 C 0.018 3.982 8 H 0.131 0.869 9 C -0.165 4.165 10 C -0.151 4.151 11 H 0.163 0.837 12 C 0.310 3.690 13 N -0.402 5.402 14 O -0.473 6.473 15 C -0.160 4.160 16 C -0.154 4.154 17 C -0.225 4.225 18 C -0.111 4.111 19 C -0.174 4.174 20 O -0.355 6.355 21 Si 0.718 3.282 22 H 0.087 0.913 23 H 0.103 0.897 24 H 0.129 0.871 25 H 0.253 0.747 26 H 0.112 0.888 27 H 0.106 0.894 28 H 0.249 0.751 29 H 0.236 0.764 30 H 0.111 0.889 31 H 0.107 0.893 32 H 0.189 0.811 33 H 0.201 0.799 34 H 0.149 0.851 35 H 0.236 0.764 36 H -0.224 1.224 37 H -0.217 1.217 Dipole moment (debyes) X Y Z Total from point charges 1.161 0.118 2.147 2.444 hybrid contribution -0.805 0.870 -0.298 1.222 sum 0.356 0.989 1.850 2.127 Atomic orbital electron populations 1.22481 0.75955 1.05544 1.04139 1.43913 1.07088 1.04602 1.52360 1.20250 0.91554 0.87338 1.20743 1.17238 0.85286 0.84345 0.75348 1.90760 1.17726 1.85388 1.52864 1.45544 1.11626 1.05105 1.72404 1.22542 1.00164 0.78592 0.96901 0.86884 1.23365 1.02745 0.93312 0.97125 1.22585 0.96955 0.96609 0.98905 0.83729 1.20740 0.90047 0.78707 0.79501 1.43820 1.17072 1.45681 1.33583 1.90744 1.34546 1.66012 1.56032 1.23228 1.00731 0.94434 0.97646 1.21715 0.94326 0.95951 1.03416 1.21010 0.95470 0.95476 1.10536 1.21464 0.91527 0.89322 1.08806 1.25256 0.93240 0.94115 1.04761 1.86561 1.30534 1.88298 1.30072 0.93266 0.82962 0.73312 0.78682 0.91267 0.89680 0.87105 0.74716 0.88843 0.89409 0.75091 0.76396 0.88947 0.89331 0.81090 0.79889 0.85107 0.76396 1.22426 1.21691 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 0.27 10.21 127.77 1.30 1.57 16 2 N -0.41 -2.08 3.16 -519.69 -1.64 -3.72 16 3 C -0.09 -0.44 6.89 40.35 0.28 -0.16 16 4 C 0.59 3.88 7.77 86.45 0.67 4.55 16 5 O -0.59 -7.60 14.20 -4.31 -0.06 -7.66 16 6 N -0.70 -0.13 5.33 -444.00 -2.37 -2.50 16 7 C 0.12 -0.17 4.27 45.52 0.19 0.02 16 8 H 0.11 0.11 7.41 -2.39 -0.02 0.09 16 9 C -0.13 0.53 7.43 31.12 0.23 0.76 16 10 C -0.13 0.59 4.15 -11.01 -0.05 0.54 16 11 H 0.15 -1.37 8.14 -2.39 -0.02 -1.39 16 12 C 0.52 0.31 7.63 87.66 0.67 0.98 16 13 N -0.84 5.13 8.87 -173.52 -1.54 3.59 16 14 O -0.59 -6.27 16.74 -3.05 -0.05 -6.32 16 15 C -0.12 0.28 7.16 31.12 0.22 0.50 16 16 C -0.13 0.02 10.35 22.57 0.23 0.25 16 17 C -0.20 0.32 9.37 22.02 0.21 0.53 16 18 C 0.01 0.01 6.14 41.35 0.25 0.26 16 19 C -0.07 0.12 2.99 71.24 0.21 0.33 16 20 O -0.55 -0.23 10.12 -148.98 -1.51 -1.74 16 21 Si 0.82 -3.38 31.10 68.60 2.13 -1.25 16 22 H 0.07 0.34 8.14 -2.38 -0.02 0.32 16 23 H 0.08 0.66 6.11 -2.39 -0.01 0.64 16 24 H 0.11 0.13 5.25 -2.38 -0.01 0.12 16 25 H 0.42 -1.68 7.68 -92.71 -0.71 -2.39 16 26 H 0.09 -0.54 8.14 -2.39 -0.02 -0.55 16 27 H 0.09 -0.26 8.10 -2.39 -0.02 -0.27 16 28 H 0.42 -5.12 8.83 -92.71 -0.82 -5.94 16 29 H 0.41 -2.60 8.93 -92.71 -0.83 -3.42 16 30 H 0.09 0.03 7.41 -2.39 -0.02 0.01 16 31 H 0.09 -0.28 8.14 -2.39 -0.02 -0.30 16 32 H 0.17 -1.05 7.49 -2.91 -0.02 -1.07 16 33 H 0.18 -1.57 6.85 -2.91 -0.02 -1.59 16 34 H 0.13 -0.45 7.96 -2.39 -0.02 -0.47 16 35 H 0.39 -1.59 8.30 -74.06 -0.61 -2.21 16 36 H -0.30 -0.85 7.11 99.48 0.71 -0.14 16 37 H -0.29 -0.43 7.11 99.48 0.71 0.28 16 Total: 0.00 -25.36 310.97 -2.38 -27.74 By element: Atomic # 1 Polarization: -16.51 SS G_CDS: -1.78 Total: -18.29 kcal Atomic # 6 Polarization: 5.71 SS G_CDS: 4.43 Total: 10.14 kcal Atomic # 7 Polarization: 2.92 SS G_CDS: -5.55 Total: -2.63 kcal Atomic # 8 Polarization: -14.10 SS G_CDS: -1.62 Total: -15.72 kcal Atomic # 14 Polarization: -3.38 SS G_CDS: 2.13 Total: -1.25 kcal Total: -25.36 -2.38 -27.74 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_11684966_10803936.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -5.343 kcal (2) G-P(sol) polarization free energy of solvation -25.361 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -30.704 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.382 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.743 kcal (6) G-S(sol) free energy of system = (1) + (5) -33.086 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.71 seconds