Wall clock time and date at job start Thu Mar 4 2021 13:04:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 C 1.34851 * 125.90364 * 2 1 4 4 C 1.40939 * 107.46816 * 180.28989 * 3 2 1 5 5 C 1.50700 * 126.26523 * 179.75420 * 4 3 2 6 6 O 1.42892 * 109.47180 * 254.97587 * 5 4 3 7 7 Si 1.86307 * 109.46989 * 14.97976 * 5 4 3 8 8 C 1.34844 * 107.46665 * 359.73712 * 4 3 2 9 9 C 1.50702 * 125.90126 * 179.97438 * 8 4 3 10 10 N 1.36564 * 108.20578 * 359.97438 * 8 4 3 11 11 C 1.40226 * 125.67185 * 179.97438 * 10 8 4 12 12 C 1.38901 * 119.99543 * 269.99867 * 11 10 8 13 13 C 1.50693 * 119.88685 * 0.04909 * 12 11 10 14 14 C 1.38271 * 120.22686 * 180.02562 * 12 11 10 15 15 C 1.37971 * 120.21761 * 0.02562 * 14 12 11 16 16 C 1.39620 * 119.98628 * 0.02562 * 15 14 12 17 17 C 1.47860 * 120.11565 * 179.97438 * 16 15 14 18 18 O 1.21546 * 120.00364 * 179.97438 * 17 16 15 19 19 N 1.34778 * 119.99548 * 0.02562 * 17 16 15 20 20 C 1.46497 * 119.99886 * 180.02562 * 19 17 16 21 21 H 1.09005 * 112.90598 * 336.24342 * 20 19 17 22 22 C 1.53775 * 113.61946 * 107.49987 * 20 19 17 23 23 C 1.53777 * 87.08539 * 139.98196 * 22 20 19 24 24 H 1.09005 * 113.69125 * 89.12634 * 23 22 20 25 25 C 1.50694 * 113.61568 * 220.02224 * 23 22 20 26 26 N 1.34784 * 119.99988 * 277.49596 * 25 23 22 27 27 O 1.21283 * 120.00363 * 97.49478 * 25 23 22 28 28 C 1.53781 * 113.61418 * 205.00051 * 20 19 17 29 29 C 1.38593 * 119.99308 * 90.30506 * 11 10 8 30 30 H 1.08999 * 109.47186 * 270.15765 * 1 2 3 31 31 H 1.09001 * 109.47316 * 30.15873 * 1 2 3 32 32 H 1.09001 * 109.47311 * 150.15809 * 1 2 3 33 33 H 1.08007 * 126.26349 * 0.05859 * 3 2 1 34 34 H 1.09003 * 109.46507 * 134.97373 * 5 4 3 35 35 H 0.96702 * 114.00081 * 180.02562 * 6 5 4 36 36 H 1.48501 * 109.99599 * 178.67852 * 7 5 4 37 37 H 1.48500 * 109.99752 * 299.99639 * 7 5 4 38 38 H 1.09003 * 109.47105 * 270.02756 * 9 8 4 39 39 H 1.09006 * 109.47001 * 30.02128 * 9 8 4 40 40 H 1.08999 * 109.47552 * 150.02303 * 9 8 4 41 41 H 1.09000 * 109.47212 * 269.97208 * 13 12 11 42 42 H 1.09002 * 109.47484 * 29.97505 * 13 12 11 43 43 H 1.09005 * 109.47466 * 149.97740 * 13 12 11 44 44 H 1.07994 * 119.88989 * 180.02562 * 14 12 11 45 45 H 1.07997 * 120.00749 * 179.97438 * 15 14 12 46 46 H 0.97000 * 120.00327 * 359.97438 * 19 17 16 47 47 H 1.09004 * 113.61307 * 25.43042 * 22 20 19 48 48 H 1.09003 * 113.61207 * 254.53158 * 22 20 19 49 49 H 0.97000 * 119.99339 * 0.02562 * 26 25 23 50 50 H 0.96995 * 120.00015 * 179.72576 * 26 25 23 51 51 H 1.09001 * 113.61337 * 105.47038 * 28 20 19 52 52 H 1.08993 * 113.61593 * 334.56289 * 28 20 19 53 53 H 1.08004 * 120.10563 * 359.96832 * 29 11 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2978 1.0923 0.0000 4 6 3.6348 0.6466 -0.0068 5 6 4.8647 1.5174 -0.0145 6 8 5.4482 1.5062 -1.3188 7 14 4.3935 3.2616 0.4402 8 6 3.6121 -0.7016 -0.0048 9 6 4.8177 -1.6058 -0.0108 10 7 2.3078 -1.1063 0.0036 11 6 1.8644 -2.4366 0.0076 12 6 1.6374 -3.0965 -1.1934 13 6 1.8695 -2.3808 -2.4990 14 6 1.1996 -4.4081 -1.1951 15 6 0.9848 -5.0700 -0.0037 16 6 1.2091 -4.4149 1.2088 17 6 0.9793 -5.1213 2.4872 18 8 1.1756 -4.5493 3.5415 19 7 0.5531 -6.3999 2.4834 20 6 0.3248 -7.0997 3.7501 21 1 0.8954 -6.6770 4.5771 22 6 -1.1625 -7.3163 4.0749 23 6 -0.7669 -8.7119 4.5853 24 1 -0.4948 -8.7314 5.6407 25 6 -1.7507 -9.7916 4.2146 26 7 -2.8592 -9.9775 4.9584 27 8 -1.5450 -10.4932 3.2469 28 6 0.4423 -8.6290 3.6388 29 6 1.6466 -3.0907 1.2099 30 1 -0.3633 0.0028 1.0276 31 1 -0.3634 0.8886 -0.5163 32 1 -0.3634 -0.8914 -0.5114 33 1 1.9670 2.1205 0.0009 34 1 5.5849 1.1353 0.7091 35 1 6.2462 2.0467 -1.3974 36 1 5.6024 4.1236 0.4673 37 1 3.4119 3.7940 -0.5387 38 1 5.1025 -1.8249 -1.0399 39 1 5.6453 -1.1113 0.4978 40 1 4.5774 -2.5353 0.5054 41 1 0.9507 -1.8829 -2.8089 42 1 2.6591 -1.6401 -2.3720 43 1 2.1667 -3.1016 -3.2608 44 1 1.0253 -4.9161 -2.1320 45 1 0.6425 -6.0942 -0.0089 46 1 0.3967 -6.8566 1.6420 47 1 -1.8032 -7.3392 3.1933 48 1 -1.5394 -6.6563 4.8563 49 1 -3.0239 -9.4161 5.7321 50 1 -3.4944 -10.6698 4.7175 51 1 1.3611 -9.0286 4.0682 52 1 0.2405 -9.0108 2.6381 53 1 1.8183 -2.5776 2.1446 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_11684966_12335842.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:04:23 Heat of formation + Delta-G solvation = -6.217219 kcal Electronic energy + Delta-G solvation = -35284.366060 eV Core-core repulsion = 30702.852597 eV Total energy + Delta-G solvation = -4581.513462 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 384.188 amu Computer time = 1.65 seconds Orbital eigenvalues (eV) -42.94731 -41.73506 -40.88121 -39.66972 -38.43363 -37.78249 -35.14935 -34.62587 -34.06057 -33.72193 -33.64613 -30.69926 -30.15413 -28.92002 -27.42564 -26.81512 -26.73108 -24.71557 -24.02526 -23.62586 -22.26648 -21.80879 -21.03114 -20.57946 -19.90963 -18.68644 -18.56504 -18.42661 -17.86749 -17.54575 -17.20037 -16.79181 -16.42356 -16.29868 -16.20964 -15.82069 -15.64470 -15.40961 -15.29307 -15.13202 -14.94602 -14.81968 -14.53958 -14.35943 -14.22854 -14.12273 -13.72650 -13.60189 -13.56705 -13.47178 -13.39826 -13.20212 -13.13772 -13.02018 -12.77816 -12.59471 -12.44922 -12.40069 -12.35464 -12.22509 -11.88556 -11.71585 -11.20081 -10.92866 -10.65876 -10.34619 -10.25173 -10.19096 -9.90026 -9.71550 -8.82401 -4.85343 -0.46010 -0.03575 1.06608 1.40328 1.55043 1.60463 1.61167 1.74458 1.76436 2.01736 2.04780 2.53380 2.67311 3.35937 3.40059 3.47497 3.60469 3.62443 3.68309 3.71294 3.74626 3.85679 3.89589 3.99102 4.11222 4.15634 4.24430 4.25500 4.35652 4.39679 4.50137 4.53813 4.54136 4.56813 4.64202 4.66171 4.66791 4.69313 4.71461 4.73047 4.88235 4.94316 4.96994 4.98199 5.00188 5.02885 5.05547 5.10874 5.14923 5.24917 5.36111 5.44729 5.54596 5.88296 5.97579 6.14693 6.37969 6.46376 6.49303 6.70504 7.04410 7.33569 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.082 4.082 2 C 0.021 3.979 3 C -0.202 4.202 4 C -0.167 4.167 5 C -0.046 4.046 6 O -0.559 6.559 7 Si 0.765 3.235 8 C 0.039 3.961 9 C -0.078 4.078 10 N -0.400 5.400 11 C 0.089 3.911 12 C -0.043 4.043 13 C -0.120 4.120 14 C -0.112 4.112 15 C -0.056 4.056 16 C -0.143 4.143 17 C 0.562 3.438 18 O -0.574 6.574 19 N -0.701 5.701 20 C 0.120 3.880 21 H 0.113 0.887 22 C -0.127 4.127 23 C -0.130 4.130 24 H 0.144 0.856 25 C 0.524 3.476 26 N -0.839 5.839 27 O -0.593 6.593 28 C -0.122 4.122 29 C -0.050 4.050 30 H 0.077 0.923 31 H 0.092 0.908 32 H 0.063 0.937 33 H 0.146 0.854 34 H 0.080 0.920 35 H 0.389 0.611 36 H -0.286 1.286 37 H -0.301 1.301 38 H 0.071 0.929 39 H 0.088 0.912 40 H 0.060 0.940 41 H 0.083 0.917 42 H 0.052 0.948 43 H 0.094 0.906 44 H 0.170 0.830 45 H 0.166 0.834 46 H 0.414 0.586 47 H 0.088 0.912 48 H 0.092 0.908 49 H 0.418 0.582 50 H 0.405 0.595 51 H 0.088 0.912 52 H 0.093 0.907 53 H 0.122 0.878 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.346 -3.330 1.914 5.094 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.139 4.139 2 C -0.088 4.088 3 C -0.226 4.226 4 C -0.174 4.174 5 C -0.156 4.156 6 O -0.368 6.368 7 Si 0.671 3.329 8 C -0.070 4.070 9 C -0.135 4.135 10 N -0.075 5.075 11 C 0.000 4.000 12 C -0.044 4.044 13 C -0.176 4.176 14 C -0.130 4.130 15 C -0.074 4.074 16 C -0.147 4.147 17 C 0.351 3.649 18 O -0.455 6.455 19 N -0.352 5.352 20 C 0.015 3.985 21 H 0.131 0.869 22 C -0.166 4.166 23 C -0.152 4.152 24 H 0.162 0.838 25 C 0.310 3.690 26 N -0.402 5.402 27 O -0.473 6.473 28 C -0.160 4.160 29 C -0.070 4.070 30 H 0.095 0.905 31 H 0.111 0.889 32 H 0.082 0.918 33 H 0.164 0.836 34 H 0.098 0.902 35 H 0.238 0.762 36 H -0.213 1.213 37 H -0.228 1.228 38 H 0.090 0.910 39 H 0.106 0.894 40 H 0.079 0.921 41 H 0.101 0.899 42 H 0.071 0.929 43 H 0.113 0.887 44 H 0.188 0.812 45 H 0.183 0.817 46 H 0.253 0.747 47 H 0.106 0.894 48 H 0.111 0.889 49 H 0.249 0.751 50 H 0.236 0.764 51 H 0.107 0.893 52 H 0.112 0.888 53 H 0.140 0.860 Dipole moment (debyes) X Y Z Total from point charges -3.553 -3.170 1.699 5.055 hybrid contribution 0.525 -0.066 -0.765 0.930 sum -3.028 -3.236 0.934 4.529 Atomic orbital electron populations 1.20355 0.86599 1.03679 1.03256 1.20717 0.94394 0.84758 1.08890 1.20720 0.92076 0.98123 1.11643 1.18709 0.93799 0.92079 1.12780 1.24198 0.94600 1.09861 0.86944 1.86583 1.46663 1.72471 1.31058 0.93918 0.78537 0.72222 0.88253 1.20480 0.84577 0.94181 1.07809 1.20277 0.93211 0.97285 1.02723 1.41297 1.05307 1.03080 1.57849 1.17409 1.05253 0.83926 0.93392 1.20489 0.94698 0.94923 0.94310 1.20875 1.02617 1.00679 0.93452 1.21306 0.99036 0.92676 0.99971 1.21737 0.94481 1.00879 0.90330 1.19724 1.06746 0.94461 0.93758 1.18370 0.75999 0.82125 0.88425 1.90783 1.53279 1.67507 1.33905 1.45790 1.67002 1.11990 1.10413 1.22552 0.96888 0.91839 0.87176 0.86883 1.23362 0.96876 0.94013 1.02354 1.22594 0.95703 0.93537 1.03318 0.83811 1.20750 0.82682 0.83880 0.81716 1.43828 1.23946 1.39873 1.32515 1.90741 1.77128 1.49379 1.30077 1.23235 0.98095 0.93695 1.00996 1.21199 0.94815 0.93777 0.97216 0.90477 0.88937 0.91793 0.83629 0.90163 0.76194 1.21347 1.22811 0.90987 0.89371 0.92097 0.89888 0.92913 0.88686 0.81248 0.81675 0.74724 0.89370 0.88890 0.75088 0.76422 0.89290 0.88825 0.86049 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -0.11 10.09 71.24 0.72 0.60 16 2 C 0.02 0.14 6.86 41.04 0.28 0.42 16 3 C -0.20 -1.55 9.27 22.15 0.21 -1.34 16 4 C -0.17 -1.36 5.39 -19.98 -0.11 -1.47 16 5 C -0.05 -0.21 2.59 71.24 0.18 -0.03 16 6 O -0.56 -3.47 12.86 -148.98 -1.92 -5.38 16 7 Si 0.76 2.17 30.84 68.60 2.12 4.28 16 8 C 0.04 0.30 6.32 41.04 0.26 0.56 16 9 C -0.08 -0.32 9.88 71.24 0.70 0.38 16 10 N -0.40 -2.64 1.85 -320.37 -0.59 -3.23 16 11 C 0.09 0.36 4.49 38.04 0.17 0.53 16 12 C -0.04 0.00 5.90 -19.70 -0.12 -0.11 16 13 C -0.12 0.08 9.76 71.23 0.70 0.78 16 14 C -0.11 0.56 9.67 22.21 0.21 0.78 16 15 C -0.06 0.29 9.54 22.54 0.21 0.50 16 16 C -0.14 -0.19 5.87 -20.10 -0.12 -0.31 16 17 C 0.56 2.14 7.77 86.79 0.67 2.82 16 18 O -0.57 -6.96 15.94 -3.86 -0.06 -7.02 16 19 N -0.70 1.86 5.31 -442.91 -2.35 -0.49 16 20 C 0.12 -0.38 4.24 45.52 0.19 -0.18 16 21 H 0.11 -0.06 7.46 -2.38 -0.02 -0.08 16 22 C -0.13 0.71 7.43 31.12 0.23 0.94 16 23 C -0.13 0.75 4.15 -11.01 -0.05 0.71 16 24 H 0.14 -1.50 8.14 -2.38 -0.02 -1.51 16 25 C 0.52 -0.28 7.63 87.65 0.67 0.39 16 26 N -0.84 5.89 8.87 -173.53 -1.54 4.35 16 27 O -0.59 -5.50 16.74 -3.04 -0.05 -5.55 16 28 C -0.12 0.49 7.16 31.12 0.22 0.71 16 29 C -0.05 -0.25 9.51 22.65 0.22 -0.04 16 30 H 0.08 0.05 8.14 -2.39 -0.02 0.03 16 31 H 0.09 -0.09 8.14 -2.39 -0.02 -0.11 16 32 H 0.06 0.06 7.83 -2.39 -0.02 0.04 16 33 H 0.15 0.82 6.55 -2.91 -0.02 0.80 16 34 H 0.08 0.08 7.50 -2.39 -0.02 0.06 16 35 H 0.39 -0.81 8.74 -74.06 -0.65 -1.45 16 36 H -0.29 -1.66 7.11 99.48 0.71 -0.96 16 37 H -0.30 -3.01 7.06 99.48 0.70 -2.31 16 38 H 0.07 0.28 8.14 -2.39 -0.02 0.26 16 39 H 0.09 0.18 7.50 -2.38 -0.02 0.17 16 40 H 0.06 0.24 7.83 -2.39 -0.02 0.22 16 41 H 0.08 -0.11 8.14 -2.39 -0.02 -0.13 16 42 H 0.05 0.25 6.98 -2.39 -0.02 0.23 16 43 H 0.09 -0.44 8.08 -2.38 -0.02 -0.46 16 44 H 0.17 -1.83 8.06 -2.91 -0.02 -1.85 16 45 H 0.17 -1.97 6.40 -2.91 -0.02 -1.99 16 46 H 0.41 -3.26 6.76 -92.71 -0.63 -3.89 16 47 H 0.09 -0.41 8.09 -2.38 -0.02 -0.42 16 48 H 0.09 -0.63 8.14 -2.39 -0.02 -0.65 16 49 H 0.42 -5.46 8.83 -92.71 -0.82 -6.28 16 50 H 0.40 -2.93 8.93 -92.71 -0.83 -3.76 16 51 H 0.09 -0.42 8.14 -2.39 -0.02 -0.44 16 52 H 0.09 -0.17 7.41 -2.39 -0.02 -0.18 16 53 H 0.12 1.10 7.65 -2.91 -0.02 1.08 16 Total: 0.00 -29.18 437.69 -0.82 -30.01 By element: Atomic # 1 Polarization: -21.71 SS G_CDS: -1.89 Total: -23.60 kcal Atomic # 6 Polarization: 1.16 SS G_CDS: 5.47 Total: 6.63 kcal Atomic # 7 Polarization: 5.12 SS G_CDS: -4.48 Total: 0.63 kcal Atomic # 8 Polarization: -15.92 SS G_CDS: -2.03 Total: -17.95 kcal Atomic # 14 Polarization: 2.17 SS G_CDS: 2.12 Total: 4.28 kcal Total: -29.18 -0.82 -30.01 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_11684966_12335842.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 23.792 kcal (2) G-P(sol) polarization free energy of solvation -29.185 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -5.393 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.824 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.009 kcal (6) G-S(sol) free energy of system = (1) + (5) -6.217 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.65 seconds