Wall clock time and date at job start Thu Mar 4 2021 13:04:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 C 1.34843 * 125.90340 * 2 1 4 4 C 1.40950 * 107.47053 * 180.16079 * 3 2 1 5 5 C 1.50699 * 126.26639 * 179.83244 * 4 3 2 6 6 O 1.42892 * 109.47249 * 104.69148 * 5 4 3 7 7 Si 1.86298 * 109.47032 * 344.68534 * 5 4 3 8 8 C 1.34847 * 107.46260 * 359.57187 * 4 3 2 9 9 C 1.50704 * 125.89429 * 180.24130 * 8 4 3 10 10 N 1.36568 * 108.20758 * 0.26056 * 8 4 3 11 11 C 1.40198 * 125.67382 * 180.02562 * 10 8 4 12 12 C 1.38829 * 120.06092 * 294.72295 * 11 10 8 13 13 C 1.38125 * 119.93045 * 179.74667 * 12 11 10 14 14 C 1.38279 * 120.06231 * 0.54825 * 13 12 11 15 15 C 1.50700 * 119.93267 * 179.72130 * 14 13 12 16 16 C 1.50704 * 109.47486 * 269.98489 * 15 14 13 17 17 O 1.21283 * 119.99540 * 359.97438 * 16 15 14 18 18 N 1.34768 * 120.00199 * 180.02562 * 16 15 14 19 19 C 1.46498 * 120.00297 * 179.97438 * 18 16 15 20 20 H 1.09004 * 112.84506 * 23.80171 * 19 18 16 21 21 C 1.53779 * 113.61778 * 154.99244 * 19 18 16 22 22 C 1.53788 * 87.08187 * 139.98101 * 21 19 18 23 23 H 1.09007 * 113.60833 * 89.11694 * 22 21 19 24 24 C 1.50694 * 113.61706 * 219.93771 * 22 21 19 25 25 N 1.34780 * 120.00121 * 180.02562 * 24 22 21 26 26 O 1.21276 * 120.00036 * 0.02562 * 24 22 21 27 27 C 1.53777 * 113.61590 * 252.49299 * 19 18 16 28 28 C 1.38273 * 120.13479 * 359.70709 * 14 13 12 29 29 C 1.38125 * 120.06470 * 0.02562 * 28 14 13 30 30 H 1.09004 * 109.46610 * 270.32071 * 1 2 3 31 31 H 1.09001 * 109.46786 * 30.31244 * 1 2 3 32 32 H 1.08995 * 109.47511 * 150.31937 * 1 2 3 33 33 H 1.08003 * 126.26655 * 359.97438 * 3 2 1 34 34 H 1.09004 * 109.46453 * 224.69217 * 5 4 3 35 35 H 0.96703 * 114.00176 * 299.99748 * 6 5 4 36 36 H 1.48506 * 109.99834 * 58.68765 * 7 5 4 37 37 H 1.48502 * 110.00011 * 180.02562 * 7 5 4 38 38 H 1.09005 * 109.47017 * 90.02806 * 9 8 4 39 39 H 1.09002 * 109.46735 * 210.01516 * 9 8 4 40 40 H 1.08993 * 109.47600 * 330.02503 * 9 8 4 41 41 H 1.07997 * 120.03290 * 0.02776 * 12 11 10 42 42 H 1.07998 * 119.96709 * 180.27751 * 13 12 11 43 43 H 1.09002 * 109.46957 * 29.98244 * 15 14 13 44 44 H 1.09001 * 109.47326 * 149.98039 * 15 14 13 45 45 H 0.97008 * 120.00381 * 359.97438 * 18 16 15 46 46 H 1.09002 * 113.62072 * 254.53228 * 21 19 18 47 47 H 1.09008 * 113.61453 * 25.35303 * 21 19 18 48 48 H 0.97002 * 119.99470 * 0.02562 * 25 24 22 49 49 H 0.96998 * 120.00123 * 179.97438 * 25 24 22 50 50 H 1.08996 * 113.61496 * 334.56915 * 27 19 18 51 51 H 1.09004 * 113.61253 * 105.46664 * 27 19 18 52 52 H 1.08003 * 119.96982 * 180.02562 * 28 14 13 53 53 H 1.08006 * 120.02961 * 180.02562 * 29 28 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2978 1.0922 0.0000 4 6 3.6350 0.6466 -0.0038 5 6 4.8648 1.5174 -0.0087 6 8 5.4552 1.5153 1.2926 7 14 4.3912 3.2583 -0.4731 8 6 3.6121 -0.7017 0.0037 9 6 4.8179 -1.6058 0.0081 10 7 2.3078 -1.1064 0.0060 11 6 1.8645 -2.4364 0.0139 12 6 2.1213 -3.2615 -1.0726 13 6 1.6879 -4.5729 -1.0598 14 6 0.9889 -5.0608 0.0290 15 6 0.5118 -6.4903 0.0373 16 6 -0.8687 -6.5627 -0.5627 17 8 -1.4120 -5.5528 -0.9576 18 7 -1.5001 -7.7495 -0.6594 19 6 -2.8423 -7.8198 -1.2421 20 1 -3.0568 -6.9875 -1.9125 21 6 -3.1834 -9.1953 -1.8392 22 6 -4.5916 -9.0153 -1.2478 23 1 -5.2857 -8.5096 -1.9193 24 6 -5.1640 -10.2776 -0.6566 25 7 -6.3928 -10.2656 -0.1030 26 8 -4.5190 -11.3044 -0.6789 27 6 -3.9499 -8.0816 -0.2080 28 6 0.7269 -4.2398 1.1104 29 6 1.1627 -2.9291 1.1056 30 1 -0.3633 0.0058 1.0277 31 1 -0.3633 0.8872 -0.5187 32 1 -0.3634 -0.8928 -0.5088 33 1 1.9671 2.1204 -0.0004 34 1 5.5812 1.1302 -0.7334 35 1 4.8729 1.8480 1.9893 36 1 3.3908 3.7863 0.4892 37 1 5.5955 4.1271 -0.4821 38 1 5.1087 -1.8185 1.0369 39 1 4.5745 -2.5385 -0.5007 40 1 5.6424 -1.1145 -0.5083 41 1 2.6635 -2.8797 -1.9250 42 1 1.8913 -5.2166 -1.9028 43 1 1.1953 -7.1048 -0.5488 44 1 0.4819 -6.8575 1.0631 45 1 -1.0657 -8.5572 -0.3432 46 1 -3.1667 -9.2147 -2.9289 47 1 -2.6226 -10.0164 -1.3926 48 1 -6.9088 -9.4444 -0.0856 49 1 -6.7614 -11.0783 0.2772 50 1 -3.5997 -8.5982 0.6856 51 1 -4.5519 -7.2017 0.0192 52 1 0.1811 -4.6238 1.9596 53 1 0.9581 -2.2884 1.9507 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_11684966_12335864.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:04:37 Heat of formation + Delta-G solvation = -11.474184 kcal Electronic energy + Delta-G solvation = -34338.120209 eV Core-core repulsion = 29756.378787 eV Total energy + Delta-G solvation = -4581.741421 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 384.188 amu Computer time = 1.58 seconds Orbital eigenvalues (eV) -42.84718 -41.62171 -40.76373 -39.77023 -38.42625 -37.82994 -34.89281 -34.73438 -34.30832 -33.71095 -32.09460 -32.02129 -30.14616 -28.78175 -27.29080 -26.74152 -26.47537 -24.56248 -23.96071 -23.31893 -22.13608 -21.52713 -20.98875 -20.46976 -20.32820 -18.60355 -18.13703 -17.99460 -17.85801 -17.59375 -17.16540 -17.04770 -16.39271 -16.28977 -16.19750 -15.89678 -15.65396 -15.52398 -15.30893 -15.07243 -14.94764 -14.60470 -14.53751 -14.36571 -14.28734 -14.11195 -14.00750 -13.60154 -13.52260 -13.43643 -13.41723 -13.21664 -13.09534 -12.86438 -12.77806 -12.60624 -12.34777 -12.22819 -12.15913 -12.06159 -11.69197 -11.68885 -11.03840 -10.89662 -10.67289 -10.48351 -10.13150 -10.07106 -10.03997 -9.38851 -8.83564 -4.84292 -0.04962 0.27586 1.13385 1.43248 1.55452 1.63974 1.67548 1.76792 1.83721 2.03091 2.12051 2.58257 2.74712 3.38932 3.45302 3.56682 3.58923 3.71642 3.74710 3.75385 3.84843 3.88220 3.98500 3.98701 4.13116 4.22850 4.26623 4.28211 4.33964 4.43286 4.53124 4.56150 4.57823 4.58617 4.64757 4.67401 4.67780 4.72573 4.73433 4.77324 4.89604 4.92350 4.97801 5.00481 5.02006 5.09595 5.15786 5.18590 5.28411 5.36625 5.45295 5.55254 5.74278 5.87117 5.99240 6.17620 6.44884 6.51008 6.55296 6.57683 7.25480 7.32463 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.082 4.082 2 C 0.015 3.985 3 C -0.200 4.200 4 C -0.203 4.203 5 C -0.045 4.045 6 O -0.552 6.552 7 Si 0.773 3.227 8 C 0.038 3.962 9 C -0.081 4.081 10 N -0.403 5.403 11 C 0.100 3.900 12 C -0.116 4.116 13 C -0.096 4.096 14 C -0.060 4.060 15 C -0.102 4.102 16 C 0.516 3.484 17 O -0.576 6.576 18 N -0.711 5.711 19 C 0.123 3.877 20 H 0.109 0.891 21 C -0.123 4.123 22 C -0.132 4.132 23 H 0.142 0.858 24 C 0.524 3.476 25 N -0.839 5.839 26 O -0.593 6.593 27 C -0.126 4.126 28 C -0.096 4.096 29 C -0.117 4.117 30 H 0.076 0.924 31 H 0.095 0.905 32 H 0.056 0.944 33 H 0.151 0.849 34 H 0.114 0.886 35 H 0.381 0.619 36 H -0.287 1.287 37 H -0.303 1.303 38 H 0.067 0.933 39 H 0.069 0.931 40 H 0.088 0.912 41 H 0.130 0.870 42 H 0.147 0.853 43 H 0.134 0.866 44 H 0.133 0.867 45 H 0.416 0.584 46 H 0.085 0.915 47 H 0.092 0.908 48 H 0.418 0.582 49 H 0.405 0.595 50 H 0.087 0.913 51 H 0.090 0.910 52 H 0.146 0.854 53 H 0.126 0.874 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.813 -3.943 -0.377 6.233 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.139 4.139 2 C -0.094 4.094 3 C -0.224 4.224 4 C -0.209 4.209 5 C -0.155 4.155 6 O -0.359 6.359 7 Si 0.678 3.322 8 C -0.072 4.072 9 C -0.138 4.138 10 N -0.077 5.077 11 C 0.011 3.989 12 C -0.135 4.135 13 C -0.114 4.114 14 C -0.061 4.061 15 C -0.141 4.141 16 C 0.304 3.696 17 O -0.455 6.455 18 N -0.363 5.363 19 C 0.018 3.982 20 H 0.127 0.873 21 C -0.161 4.161 22 C -0.154 4.154 23 H 0.160 0.840 24 C 0.309 3.691 25 N -0.402 5.402 26 O -0.474 6.474 27 C -0.166 4.166 28 C -0.115 4.115 29 C -0.136 4.136 30 H 0.094 0.906 31 H 0.114 0.886 32 H 0.075 0.925 33 H 0.168 0.832 34 H 0.132 0.868 35 H 0.230 0.770 36 H -0.214 1.214 37 H -0.231 1.231 38 H 0.086 0.914 39 H 0.087 0.913 40 H 0.106 0.894 41 H 0.148 0.852 42 H 0.165 0.835 43 H 0.152 0.848 44 H 0.151 0.849 45 H 0.253 0.747 46 H 0.104 0.896 47 H 0.110 0.890 48 H 0.249 0.751 49 H 0.236 0.764 50 H 0.105 0.895 51 H 0.108 0.892 52 H 0.163 0.837 53 H 0.144 0.856 Dipole moment (debyes) X Y Z Total from point charges -4.304 -3.495 -0.847 5.609 hybrid contribution -0.399 -0.437 1.579 1.686 sum -4.703 -3.932 0.732 6.174 Atomic orbital electron populations 1.20350 0.86870 1.03613 1.03063 1.20758 0.94355 0.85061 1.09208 1.20773 0.92011 0.98129 1.11487 1.19672 0.95023 0.92762 1.13491 1.24454 0.94506 1.09399 0.87143 1.86527 1.44565 1.87115 1.17707 0.93837 0.77080 0.71984 0.89250 1.20570 0.84495 0.94400 1.07741 1.20327 0.93071 0.97648 1.02734 1.41556 1.05567 1.03493 1.57084 1.17825 1.01766 0.83157 0.96129 1.21234 1.00977 0.94376 0.96936 1.21157 0.97128 0.94726 0.98422 1.19633 0.96690 0.95787 0.93993 1.20800 0.93261 0.94258 1.05757 1.20950 0.87939 0.82954 0.77750 1.90744 1.68708 1.36098 1.49966 1.45933 1.17646 1.09953 1.62739 1.22406 0.81606 0.98429 0.95791 0.87332 1.23220 0.94311 0.96600 1.01978 1.22611 0.98262 0.94087 1.00408 0.84050 1.20777 0.81505 0.89992 0.76791 1.43832 1.17833 1.17105 1.61420 1.90739 1.61218 1.35591 1.59862 1.23343 0.97124 0.98989 0.97099 1.21127 0.98659 0.92438 0.99238 1.21193 0.98840 0.96572 0.96976 0.90573 0.88646 0.92470 0.83187 0.86788 0.77000 1.21364 1.23113 0.91423 0.91251 0.89375 0.85171 0.83494 0.84844 0.84934 0.74685 0.89610 0.89000 0.75102 0.76433 0.89460 0.89173 0.83655 0.85622 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -0.18 9.93 71.24 0.71 0.53 16 2 C 0.01 0.09 6.81 41.04 0.28 0.37 16 3 C -0.20 -1.17 9.27 22.15 0.21 -0.96 16 4 C -0.20 -1.27 5.35 -19.98 -0.11 -1.37 16 5 C -0.05 -0.20 2.60 71.24 0.19 -0.01 16 6 O -0.55 -3.82 12.88 -148.98 -1.92 -5.74 16 7 Si 0.77 1.94 30.87 68.60 2.12 4.06 16 8 C 0.04 0.26 6.81 41.04 0.28 0.54 16 9 C -0.08 -0.26 9.87 71.24 0.70 0.44 16 10 N -0.40 -2.71 2.79 -320.25 -0.89 -3.61 16 11 C 0.10 0.50 4.83 38.08 0.18 0.68 16 12 C -0.12 -0.34 8.80 22.38 0.20 -0.14 16 13 C -0.10 0.01 9.69 22.25 0.22 0.23 16 14 C -0.06 0.08 4.38 -19.85 -0.09 -0.01 16 15 C -0.10 0.74 5.83 29.10 0.17 0.91 16 16 C 0.52 -0.75 7.82 87.66 0.69 -0.06 16 17 O -0.58 -4.64 15.63 -3.04 -0.05 -4.69 16 18 N -0.71 3.95 5.35 -440.05 -2.36 1.59 16 19 C 0.12 -0.52 4.24 45.52 0.19 -0.33 16 20 H 0.11 -0.13 7.46 -2.38 -0.02 -0.15 16 21 C -0.12 0.51 7.15 31.12 0.22 0.73 16 22 C -0.13 0.76 4.15 -11.01 -0.05 0.71 16 23 H 0.14 -1.43 8.14 -2.38 -0.02 -1.45 16 24 C 0.52 -0.18 7.63 87.65 0.67 0.49 16 25 N -0.84 5.78 8.87 -173.54 -1.54 4.24 16 26 O -0.59 -5.70 16.74 -3.02 -0.05 -5.75 16 27 C -0.13 0.77 7.43 31.12 0.23 1.00 16 28 C -0.10 -0.01 9.69 22.25 0.22 0.21 16 29 C -0.12 -0.38 9.73 22.38 0.22 -0.16 16 30 H 0.08 0.06 8.14 -2.39 -0.02 0.04 16 31 H 0.09 -0.07 8.14 -2.39 -0.02 -0.09 16 32 H 0.06 0.23 7.83 -2.39 -0.02 0.22 16 33 H 0.15 0.46 6.53 -2.91 -0.02 0.44 16 34 H 0.11 0.29 7.50 -2.38 -0.02 0.27 16 35 H 0.38 0.85 8.70 -74.06 -0.64 0.21 16 36 H -0.29 -1.87 7.01 99.48 0.70 -1.17 16 37 H -0.30 -2.76 7.11 99.48 0.71 -2.05 16 38 H 0.07 0.27 8.14 -2.38 -0.02 0.25 16 39 H 0.07 0.12 6.86 -2.39 -0.02 0.10 16 40 H 0.09 0.15 7.50 -2.39 -0.02 0.13 16 41 H 0.13 0.26 8.06 -2.91 -0.02 0.24 16 42 H 0.15 -0.62 8.06 -2.91 -0.02 -0.65 16 43 H 0.13 -1.62 8.08 -2.39 -0.02 -1.64 16 44 H 0.13 -1.61 8.08 -2.39 -0.02 -1.63 16 45 H 0.42 -4.31 8.73 -92.70 -0.81 -5.12 16 46 H 0.09 -0.40 8.14 -2.39 -0.02 -0.42 16 47 H 0.09 -0.15 7.42 -2.38 -0.02 -0.17 16 48 H 0.42 -5.42 8.83 -92.71 -0.82 -6.24 16 49 H 0.40 -2.88 8.93 -92.71 -0.83 -3.70 16 50 H 0.09 -0.44 8.10 -2.39 -0.02 -0.46 16 51 H 0.09 -0.64 8.14 -2.39 -0.02 -0.66 16 52 H 0.15 -0.57 8.06 -2.91 -0.02 -0.60 16 53 H 0.13 0.36 8.06 -2.91 -0.02 0.33 16 Total: 0.00 -28.62 440.91 -1.46 -30.08 By element: Atomic # 1 Polarization: -21.89 SS G_CDS: -2.09 Total: -23.97 kcal Atomic # 6 Polarization: -1.53 SS G_CDS: 5.32 Total: 3.79 kcal Atomic # 7 Polarization: 7.01 SS G_CDS: -4.79 Total: 2.22 kcal Atomic # 8 Polarization: -14.16 SS G_CDS: -2.02 Total: -16.18 kcal Atomic # 14 Polarization: 1.94 SS G_CDS: 2.12 Total: 4.06 kcal Total: -28.62 -1.46 -30.08 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_11684966_12335864.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 18.602 kcal (2) G-P(sol) polarization free energy of solvation -28.619 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -10.017 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.457 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.076 kcal (6) G-S(sol) free energy of system = (1) + (5) -11.474 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.58 seconds