Wall clock time and date at job start Thu Mar 4 2021 13:04:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53007 * 1 3 3 C 1.52995 * 109.47053 * 2 1 4 4 C 1.53004 * 109.47293 * 63.81207 * 3 2 1 5 5 C 1.52996 * 109.47388 * 183.81441 * 3 2 1 6 6 C 1.50700 * 109.47585 * 179.17411 * 5 3 2 7 7 O 1.21283 * 120.00189 * 119.79824 * 6 5 3 8 8 N 1.34776 * 119.99657 * 299.80284 * 6 5 3 9 9 C 1.46497 * 119.99513 * 175.40890 * 8 6 5 10 10 H 1.09004 * 112.85506 * 334.66181 * 9 8 6 11 11 C 1.53786 * 113.61589 * 105.86369 * 9 8 6 12 12 C 1.53960 * 87.01940 * 139.95064 * 11 9 8 13 13 H 1.08996 * 113.61235 * 89.20053 * 12 11 9 14 14 C 1.50703 * 113.66163 * 220.06846 * 12 11 9 15 15 N 1.34774 * 120.00023 * 277.55449 * 14 12 11 16 16 O 1.21286 * 119.99884 * 97.56563 * 14 12 11 17 17 C 1.53778 * 87.11182 * 334.63787 * 12 11 9 18 18 N 1.46509 * 109.46958 * 299.17458 * 5 3 2 19 19 C 1.36340 * 125.63335 * 296.05801 * 18 5 3 20 20 C 1.34855 * 108.21357 * 179.83108 * 19 18 5 21 21 C 1.40890 * 107.41915 * 0.42166 * 20 19 18 22 22 C 1.34856 * 107.41539 * 359.73664 * 21 20 19 23 23 C 1.50696 * 125.88837 * 179.97438 * 22 21 20 24 24 O 1.42900 * 109.47269 * 210.02571 * 23 22 21 25 25 Si 1.86304 * 109.47196 * 330.02581 * 23 22 21 26 26 H 1.08998 * 109.46795 * 60.00213 * 1 2 3 27 27 H 1.09004 * 109.46589 * 180.02562 * 1 2 3 28 28 H 1.09000 * 109.47226 * 299.99565 * 1 2 3 29 29 H 1.08997 * 109.46800 * 239.99814 * 2 1 3 30 30 H 1.08996 * 109.46972 * 120.00303 * 2 1 3 31 31 H 1.09005 * 109.46985 * 303.81167 * 3 2 1 32 32 H 1.08998 * 109.47232 * 290.82098 * 4 3 2 33 33 H 1.09002 * 109.46991 * 50.81605 * 4 3 2 34 34 H 1.09000 * 109.47331 * 170.81707 * 4 3 2 35 35 H 1.09005 * 109.46902 * 59.17253 * 5 3 2 36 36 H 0.96993 * 120.00245 * 355.40655 * 8 6 5 37 37 H 1.09001 * 113.61326 * 254.52921 * 11 9 8 38 38 H 1.08994 * 113.61115 * 25.43284 * 11 9 8 39 39 H 0.97005 * 120.00163 * 0.02562 * 15 14 12 40 40 H 0.97001 * 120.00227 * 180.02562 * 15 14 12 41 41 H 1.09008 * 113.61670 * 270.81408 * 17 12 11 42 42 H 1.08997 * 113.61899 * 139.91117 * 17 12 11 43 43 H 1.07993 * 125.89259 * 359.97438 * 19 18 5 44 44 H 1.08001 * 126.29048 * 180.15939 * 20 19 18 45 45 H 1.07997 * 126.29202 * 179.73607 * 21 20 19 46 46 H 1.08998 * 109.47634 * 90.02621 * 23 22 21 47 47 H 0.96704 * 114.00540 * 179.97438 * 24 23 22 48 48 H 1.48499 * 109.99975 * 178.68176 * 25 23 22 49 49 H 1.48499 * 109.99677 * 299.99927 * 25 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 1.6098 2.1355 1.2944 5 6 3.5670 1.4436 -0.0960 6 6 4.0681 2.8647 -0.1164 7 8 4.8180 3.2559 0.7528 8 7 3.6827 3.7010 -1.1006 9 6 4.0878 5.1084 -1.0662 10 1 4.2941 5.4651 -0.0571 11 6 5.1902 5.4571 -2.0803 12 6 4.4294 6.7714 -2.3339 13 1 4.7295 7.5842 -1.6727 14 6 4.3941 7.1795 -3.7842 15 7 5.4408 7.8330 -4.3261 16 8 3.4235 6.9200 -4.4637 17 6 3.1611 6.0360 -1.8698 18 7 4.1296 0.7440 1.0619 19 6 4.0164 1.1404 2.3615 20 6 4.6596 0.2415 3.1339 21 6 5.1976 -0.7408 2.2790 22 6 4.8577 -0.4078 1.0172 23 6 5.2206 -1.1759 -0.2274 24 8 5.3357 -0.2722 -1.3283 25 14 6.8463 -2.0479 0.0329 26 1 -0.3633 0.5138 -0.8900 27 1 -0.3632 -1.0277 0.0005 28 1 -0.3634 0.5138 0.8900 29 1 1.8933 -0.5139 -0.8900 30 1 1.8934 -0.5139 0.8899 31 1 1.6220 1.9756 -0.8539 32 1 0.5296 2.2807 1.2872 33 1 1.8875 1.5165 2.1476 34 1 2.1059 3.1031 1.3708 35 1 3.8739 0.9369 -1.0110 36 1 3.1371 3.3710 -1.8315 37 1 6.1711 5.5998 -1.6269 38 1 5.2145 4.7930 -2.9442 39 1 6.2172 8.0403 -3.7827 40 1 5.4180 8.0960 -5.2595 41 1 2.6297 5.5304 -2.6762 42 1 2.5063 6.6453 -1.2470 43 1 3.4987 2.0210 2.7120 44 1 4.7498 0.2714 4.2097 45 1 5.7760 -1.6020 2.5791 46 1 4.4442 -1.9108 -0.4403 47 1 5.5683 -0.6985 -2.1646 48 1 7.1999 -2.8347 -1.1759 49 1 7.9133 -1.0568 0.3238 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_11684966_12360566.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:04:52 Heat of formation + Delta-G solvation = -31.748129 kcal Electronic energy + Delta-G solvation = -31070.575906 eV Core-core repulsion = 27000.859902 eV Total energy + Delta-G solvation = -4069.716004 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 336.188 amu Computer time = 1.10 seconds Orbital eigenvalues (eV) -42.79479 -41.56474 -40.41558 -38.59873 -37.90988 -37.64253 -34.81200 -34.41498 -33.26028 -31.35628 -30.36646 -28.55422 -27.02357 -26.81784 -25.82781 -25.13635 -22.64868 -21.86555 -21.54833 -21.37878 -20.67894 -19.94489 -18.66892 -18.52104 -18.41223 -17.90991 -17.59400 -16.76791 -16.66437 -16.48258 -16.20332 -16.12364 -15.58562 -15.41098 -15.18397 -14.83323 -14.63960 -14.42951 -14.27192 -14.04221 -13.92494 -13.62116 -13.48047 -13.34873 -13.19103 -13.03642 -12.94530 -12.79505 -12.50332 -12.31265 -12.27525 -12.10136 -11.95036 -11.79274 -11.73067 -11.57910 -11.09978 -10.96947 -10.72178 -10.67116 -10.19100 -9.46919 -8.78756 -4.89088 1.01716 1.35352 1.47643 1.52367 1.61985 1.79744 2.00358 2.17223 2.27251 2.61887 3.09656 3.29764 3.35681 3.38727 3.57443 3.66200 3.75189 3.79817 3.82355 3.97202 4.18843 4.23307 4.30785 4.39779 4.45104 4.46135 4.51774 4.57545 4.59085 4.64047 4.65071 4.76373 4.80616 4.80982 4.90930 4.91429 4.98581 5.05223 5.08942 5.14783 5.32058 5.38048 5.41601 5.42370 5.45410 5.82426 6.11114 6.26765 6.34952 6.39660 6.48699 6.54655 7.02617 7.27259 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C -0.109 4.109 3 C -0.089 4.089 4 C -0.160 4.160 5 C 0.112 3.888 6 C 0.511 3.489 7 O -0.563 6.563 8 N -0.704 5.704 9 C 0.124 3.876 10 H 0.109 0.891 11 C -0.129 4.129 12 C -0.130 4.130 13 H 0.144 0.856 14 C 0.525 3.475 15 N -0.839 5.839 16 O -0.592 6.592 17 C -0.117 4.117 18 N -0.411 5.411 19 C 0.004 3.996 20 C -0.222 4.222 21 C -0.202 4.202 22 C 0.010 3.990 23 C -0.051 4.051 24 O -0.559 6.559 25 Si 0.783 3.217 26 H 0.062 0.938 27 H 0.057 0.943 28 H 0.054 0.946 29 H 0.070 0.930 30 H 0.054 0.946 31 H 0.108 0.892 32 H 0.075 0.925 33 H 0.064 0.936 34 H 0.042 0.958 35 H 0.154 0.846 36 H 0.414 0.586 37 H 0.086 0.914 38 H 0.084 0.916 39 H 0.418 0.582 40 H 0.405 0.595 41 H 0.093 0.907 42 H 0.091 0.909 43 H 0.157 0.843 44 H 0.143 0.857 45 H 0.164 0.836 46 H 0.104 0.896 47 H 0.399 0.601 48 H -0.273 1.273 49 H -0.319 1.319 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.893 -1.414 -2.244 2.798 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.208 4.208 2 C -0.147 4.147 3 C -0.108 4.108 4 C -0.217 4.217 5 C 0.006 3.994 6 C 0.297 3.703 7 O -0.441 6.441 8 N -0.355 5.355 9 C 0.019 3.981 10 H 0.127 0.873 11 C -0.168 4.168 12 C -0.151 4.151 13 H 0.161 0.839 14 C 0.310 3.690 15 N -0.402 5.402 16 O -0.472 6.472 17 C -0.156 4.156 18 N -0.087 5.087 19 C -0.126 4.126 20 C -0.246 4.246 21 C -0.227 4.227 22 C -0.101 4.101 23 C -0.160 4.160 24 O -0.370 6.370 25 Si 0.688 3.312 26 H 0.081 0.919 27 H 0.076 0.924 28 H 0.073 0.927 29 H 0.089 0.911 30 H 0.073 0.927 31 H 0.126 0.874 32 H 0.094 0.906 33 H 0.082 0.918 34 H 0.061 0.939 35 H 0.171 0.829 36 H 0.251 0.749 37 H 0.105 0.895 38 H 0.103 0.897 39 H 0.249 0.751 40 H 0.236 0.764 41 H 0.112 0.888 42 H 0.110 0.890 43 H 0.174 0.826 44 H 0.161 0.839 45 H 0.181 0.819 46 H 0.122 0.878 47 H 0.252 0.748 48 H -0.199 1.199 49 H -0.248 1.248 Dipole moment (debyes) X Y Z Total from point charges -0.534 -0.876 -2.011 2.258 hybrid contribution 0.216 0.911 -1.443 1.720 sum -0.318 0.035 -3.454 3.469 Atomic orbital electron populations 1.21782 0.94631 1.02149 1.02237 1.21465 0.96661 0.94255 1.02312 1.21544 0.89794 0.98923 1.00547 1.22201 1.02447 0.99479 0.97564 1.21871 0.95559 0.90436 0.91559 1.20908 0.79961 0.88040 0.81366 1.90755 1.36402 1.77642 1.39305 1.45819 1.54364 1.09445 1.25899 1.22477 0.95820 0.80052 0.99742 0.87329 1.23376 0.99186 0.94726 0.99523 1.22627 1.00123 0.99421 0.92950 0.83874 1.20727 0.81974 0.76155 0.90119 1.43827 1.20329 1.59573 1.16463 1.90740 1.35107 1.56977 1.64393 1.23197 0.95951 0.96994 0.99440 1.43497 1.40732 1.19132 1.05316 1.21893 1.06214 1.01497 0.82976 1.21062 1.05994 0.97799 0.99783 1.20825 1.07659 1.03153 0.91046 1.20068 1.02834 0.91680 0.95546 1.24552 1.12078 0.95091 0.84237 1.86370 1.92056 1.37693 1.20893 0.93542 0.72220 0.80421 0.85005 0.91883 0.92420 0.92680 0.91090 0.92737 0.87415 0.90625 0.91763 0.93905 0.82866 0.74893 0.89533 0.89699 0.75139 0.76362 0.88828 0.89043 0.82600 0.83883 0.81883 0.87814 0.74845 1.19948 1.24764 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.53 9.65 71.98 0.69 1.23 16 2 C -0.11 0.27 5.20 30.59 0.16 0.43 16 3 C -0.09 0.20 2.19 -10.80 -0.02 0.18 16 4 C -0.16 0.01 7.13 71.98 0.51 0.52 16 5 C 0.11 0.22 2.38 44.24 0.11 0.33 16 6 C 0.51 2.65 5.74 87.66 0.50 3.16 16 7 O -0.56 -7.88 14.93 -3.04 -0.05 -7.92 16 8 N -0.70 0.67 5.21 -440.02 -2.29 -1.63 16 9 C 0.12 -0.16 4.18 45.52 0.19 0.03 16 10 H 0.11 0.15 7.56 -2.38 -0.02 0.13 16 11 C -0.13 0.36 7.44 31.18 0.23 0.60 16 12 C -0.13 0.52 4.15 -10.95 -0.05 0.47 16 13 H 0.14 -1.23 8.14 -2.39 -0.02 -1.25 16 14 C 0.52 0.54 7.63 87.66 0.67 1.21 16 15 N -0.84 4.58 8.87 -173.53 -1.54 3.04 16 16 O -0.59 -6.29 16.74 -3.05 -0.05 -6.34 16 17 C -0.12 0.32 7.15 31.12 0.22 0.54 16 18 N -0.41 -2.57 1.78 -491.50 -0.87 -3.44 16 19 C 0.00 0.04 7.48 83.21 0.62 0.66 16 20 C -0.22 -1.78 10.86 22.14 0.24 -1.54 16 21 C -0.20 -1.15 9.43 22.14 0.21 -0.94 16 22 C 0.01 0.05 6.19 41.08 0.25 0.31 16 23 C -0.05 0.04 2.97 71.23 0.21 0.25 16 24 O -0.56 0.49 9.79 -148.98 -1.46 -0.96 16 25 Si 0.78 -0.48 31.14 68.60 2.14 1.65 16 26 H 0.06 -0.31 8.14 -2.39 -0.02 -0.33 16 27 H 0.06 -0.18 8.14 -2.39 -0.02 -0.20 16 28 H 0.05 -0.14 6.74 -2.39 -0.02 -0.16 16 29 H 0.07 -0.28 8.14 -2.39 -0.02 -0.30 16 30 H 0.05 0.08 7.74 -2.39 -0.02 0.06 16 31 H 0.11 -0.66 7.66 -2.38 -0.02 -0.68 16 32 H 0.07 -0.16 7.01 -2.39 -0.02 -0.17 16 33 H 0.06 0.16 5.40 -2.39 -0.01 0.15 16 34 H 0.04 0.12 6.82 -2.39 -0.02 0.10 16 35 H 0.15 0.04 5.08 -2.38 -0.01 0.03 16 36 H 0.41 -2.31 8.28 -92.71 -0.77 -3.08 16 37 H 0.09 -0.27 8.14 -2.39 -0.02 -0.29 16 38 H 0.08 -0.12 8.10 -2.39 -0.02 -0.14 16 39 H 0.42 -4.73 8.83 -92.70 -0.82 -5.55 16 40 H 0.41 -2.39 8.93 -92.71 -0.83 -3.22 16 41 H 0.09 -0.04 7.40 -2.38 -0.02 -0.06 16 42 H 0.09 -0.37 8.14 -2.39 -0.02 -0.39 16 43 H 0.16 1.27 6.24 -2.91 -0.02 1.25 16 44 H 0.14 0.75 8.06 -2.91 -0.02 0.73 16 45 H 0.16 0.00 6.89 -2.91 -0.02 -0.02 16 46 H 0.10 -0.61 7.96 -2.39 -0.02 -0.63 16 47 H 0.40 -3.74 8.74 -74.05 -0.65 -4.39 16 48 H -0.27 -0.34 7.11 99.48 0.71 0.37 16 49 H -0.32 -3.35 7.11 99.48 0.71 -2.64 16 Total: 0.00 -27.47 384.75 -1.38 -28.85 By element: Atomic # 1 Polarization: -18.66 SS G_CDS: -2.01 Total: -20.67 kcal Atomic # 6 Polarization: 2.67 SS G_CDS: 4.76 Total: 7.43 kcal Atomic # 7 Polarization: 2.68 SS G_CDS: -4.71 Total: -2.03 kcal Atomic # 8 Polarization: -13.67 SS G_CDS: -1.55 Total: -15.23 kcal Atomic # 14 Polarization: -0.48 SS G_CDS: 2.14 Total: 1.65 kcal Total: -27.47 -1.38 -28.85 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_11684966_12360566.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -2.900 kcal (2) G-P(sol) polarization free energy of solvation -27.468 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -30.368 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.380 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.848 kcal (6) G-S(sol) free energy of system = (1) + (5) -31.748 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.10 seconds