Wall clock time and date at job start Thu Mar 4 2021 13:05:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34776 * 1 3 3 O 1.21285 * 119.99898 * 2 1 4 4 C 1.50701 * 119.99799 * 179.97438 * 2 1 3 5 5 H 1.08995 * 112.84916 * 311.19597 * 4 2 1 6 6 C 1.53779 * 113.61233 * 82.50449 * 4 2 1 7 7 C 1.53790 * 87.07995 * 139.97914 * 6 4 2 8 8 H 1.09000 * 113.69032 * 89.12927 * 7 6 4 9 9 N 1.46500 * 113.61233 * 220.01951 * 7 6 4 10 10 C 1.34786 * 119.99591 * 252.49779 * 9 7 6 11 11 O 1.21647 * 120.00036 * 359.97438 * 10 9 7 12 12 C 1.47056 * 119.99381 * 180.02562 * 10 9 7 13 13 C 1.35870 * 125.42080 * 180.28966 * 12 10 9 14 14 C 1.41598 * 107.72697 * 180.14395 * 13 12 10 15 15 C 1.40065 * 133.38254 * 179.89193 * 14 13 12 16 16 C 1.36465 * 119.82889 * 179.68586 * 15 14 13 17 17 C 1.38894 * 120.62010 * 0.02562 * 16 15 14 18 18 C 1.50702 * 119.68205 * 179.97438 * 17 16 15 19 19 O 1.42899 * 109.47172 * 119.99790 * 18 17 16 20 20 Si 1.86303 * 109.46748 * 0.02562 * 18 17 16 21 21 C 1.37714 * 120.64863 * 0.02562 * 17 16 15 22 22 C 1.39186 * 119.80535 * 359.97438 * 21 17 16 23 23 N 1.37490 * 133.18676 * 180.02562 * 22 21 17 24 24 C 1.53782 * 87.07942 * 334.56477 * 7 6 4 25 25 H 0.96996 * 119.99892 * 179.97438 * 1 2 3 26 26 H 0.97000 * 119.99913 * 0.02562 * 1 2 3 27 27 H 1.09004 * 113.61497 * 25.43218 * 6 4 2 28 28 H 1.08996 * 113.61413 * 254.52728 * 6 4 2 29 29 H 0.96996 * 120.00354 * 72.49645 * 9 7 6 30 30 H 1.08000 * 126.13835 * 0.07566 * 13 12 10 31 31 H 1.08003 * 120.08050 * 359.66254 * 15 14 13 32 32 H 1.07999 * 119.69372 * 180.02562 * 16 15 14 33 33 H 1.08996 * 109.47290 * 240.00409 * 18 17 16 34 34 H 0.96693 * 114.00172 * 300.00881 * 19 18 17 35 35 H 1.48494 * 110.00096 * 58.67942 * 20 18 17 36 36 H 1.48501 * 109.99896 * 179.97438 * 20 18 17 37 37 H 1.08000 * 120.10353 * 180.02562 * 21 17 16 38 38 H 0.97002 * 125.60625 * 0.02562 * 23 22 21 39 39 H 1.09001 * 113.61139 * 139.97866 * 24 7 6 40 40 H 1.08997 * 113.61350 * 270.88377 * 24 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3478 0.0000 0.0000 3 8 1.9542 1.0504 0.0000 4 6 2.1012 -1.3051 0.0006 5 1 1.7399 -2.0021 0.7567 6 6 2.2500 -1.9311 -1.3961 7 6 3.6825 -2.3121 -0.9865 8 1 3.7551 -3.2855 -0.5013 9 7 4.6658 -2.1359 -2.0582 10 6 5.1906 -3.2134 -2.6749 11 8 4.8483 -4.3320 -2.3414 12 6 6.1780 -3.0365 -3.7503 13 6 6.7713 -4.0405 -4.4475 14 6 7.6545 -3.4513 -5.3845 15 6 8.5196 -3.9762 -6.3529 16 6 9.2590 -3.1333 -7.1309 17 6 9.1629 -1.7569 -6.9720 18 6 9.9896 -0.8456 -7.8423 19 8 9.1251 0.0092 -8.5932 20 14 11.0187 -1.8685 -9.0109 21 6 8.3203 -1.2165 -6.0262 22 6 7.5559 -2.0555 -5.2205 23 7 6.6473 -1.8232 -4.2151 24 6 3.6295 -1.1340 0.0005 25 1 -0.4850 -0.8400 -0.0004 26 1 -0.4850 0.8401 -0.0004 27 1 2.2065 -1.2042 -2.2073 28 1 1.5999 -2.7903 -1.5610 29 1 4.9390 -1.2440 -2.3239 30 1 6.6009 -5.0981 -4.3108 31 1 8.6016 -5.0451 -6.4832 32 1 9.9251 -3.5404 -7.8772 33 1 10.6445 -0.2403 -7.2156 34 1 8.5131 -0.4627 -9.1744 35 1 10.1385 -2.7216 -9.8490 36 1 11.8382 -0.9816 -9.8752 37 1 8.2522 -0.1449 -5.9104 38 1 6.3787 -0.9507 -3.8871 39 1 4.0930 -1.3498 0.9632 40 1 3.9631 -0.1894 -0.4288 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_11684966_13158378.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:05:32 Heat of formation + Delta-G solvation = -23.829974 kcal Electronic energy + Delta-G solvation = -25014.876655 eV Core-core repulsion = 21182.976063 eV Total energy + Delta-G solvation = -3831.900592 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 316.126 amu Computer time = 0.86 seconds Orbital eigenvalues (eV) -42.72929 -41.57314 -40.41110 -39.08336 -38.45999 -36.98969 -34.87134 -34.48150 -33.27675 -31.16714 -30.41022 -27.89185 -26.80084 -26.47325 -24.46154 -23.25316 -22.21206 -21.88993 -21.40365 -20.59349 -19.44303 -18.69352 -18.47797 -17.91078 -17.78157 -16.89639 -16.75715 -16.53760 -16.40914 -16.18716 -15.71418 -15.59530 -15.43949 -15.05200 -14.96887 -14.72779 -14.53886 -14.41717 -14.02164 -13.60641 -13.48103 -13.17752 -12.58191 -12.51645 -12.51107 -12.29958 -12.10431 -11.76400 -11.56992 -11.40666 -10.98615 -10.98026 -10.69753 -10.60405 -10.28304 -9.34690 -8.83961 -4.86357 -0.38800 0.52207 0.92157 1.34431 1.54011 1.65795 1.73488 1.92515 2.01916 2.14272 2.63279 2.75979 3.31915 3.37201 3.42129 3.56357 3.65424 3.67998 3.73263 3.83218 4.03957 4.20891 4.24783 4.29166 4.43384 4.50314 4.54784 4.60663 4.65944 4.66559 4.84217 4.88188 4.92764 4.97996 5.01563 5.27648 5.39486 5.42346 5.52951 5.57662 5.84506 5.97588 6.21326 6.39128 6.43032 6.50208 6.89858 7.29998 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.838 5.838 2 C 0.523 3.477 3 O -0.594 6.594 4 C -0.129 4.129 5 H 0.148 0.852 6 C -0.128 4.128 7 C 0.122 3.878 8 H 0.120 0.880 9 N -0.705 5.705 10 C 0.589 3.411 11 O -0.555 6.555 12 C 0.007 3.993 13 C -0.115 4.115 14 C -0.134 4.134 15 C -0.057 4.057 16 C -0.147 4.147 17 C -0.086 4.086 18 C -0.081 4.081 19 O -0.549 6.549 20 Si 0.770 3.230 21 C -0.112 4.112 22 C 0.106 3.894 23 N -0.567 5.567 24 C -0.123 4.123 25 H 0.418 0.582 26 H 0.405 0.595 27 H 0.084 0.916 28 H 0.096 0.904 29 H 0.409 0.591 30 H 0.158 0.842 31 H 0.149 0.851 32 H 0.148 0.852 33 H 0.127 0.873 34 H 0.386 0.614 35 H -0.282 1.282 36 H -0.306 1.306 37 H 0.133 0.867 38 H 0.430 0.570 39 H 0.091 0.909 40 H 0.090 0.910 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.834 -1.847 1.246 2.885 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.401 5.401 2 C 0.309 3.691 3 O -0.475 6.475 4 C -0.151 4.151 5 H 0.165 0.835 6 C -0.167 4.167 7 C 0.017 3.983 8 H 0.138 0.862 9 N -0.355 5.355 10 C 0.376 3.624 11 O -0.433 6.433 12 C -0.103 4.103 13 C -0.142 4.142 14 C -0.139 4.139 15 C -0.075 4.075 16 C -0.166 4.166 17 C -0.088 4.088 18 C -0.190 4.190 19 O -0.357 6.357 20 Si 0.676 3.324 21 C -0.132 4.132 22 C -0.004 4.004 23 N -0.173 5.173 24 C -0.162 4.162 25 H 0.250 0.750 26 H 0.236 0.764 27 H 0.103 0.897 28 H 0.115 0.885 29 H 0.245 0.755 30 H 0.176 0.824 31 H 0.167 0.833 32 H 0.165 0.835 33 H 0.145 0.855 34 H 0.235 0.765 35 H -0.208 1.208 36 H -0.235 1.235 37 H 0.151 0.849 38 H 0.270 0.730 39 H 0.109 0.891 40 H 0.108 0.892 Dipole moment (debyes) X Y Z Total from point charges -1.168 -1.704 1.124 2.352 hybrid contribution -1.694 1.366 -0.341 2.203 sum -2.862 -0.338 0.782 2.986 Atomic orbital electron populations 1.43825 1.06533 1.13798 1.75961 1.20780 0.83362 0.91026 0.73938 1.90743 1.69412 1.35325 1.52041 1.22603 0.96245 0.94983 1.01230 0.83483 1.23367 0.96985 1.01283 0.95027 1.22621 0.87232 1.00624 0.87818 0.86182 1.45808 1.43773 1.08671 1.37277 1.17284 0.79693 0.84862 0.80560 1.90850 1.61979 1.25180 1.65291 1.20036 1.02922 0.85998 1.01306 1.21120 0.97498 0.99456 0.96125 1.18455 1.02103 0.92461 1.00860 1.20642 0.93221 1.01176 0.92506 1.20690 1.01743 0.92286 1.01852 1.20089 0.97627 0.94351 0.96729 1.25249 0.96410 0.98339 0.99027 1.86567 1.52904 1.36364 1.59854 0.93921 0.80712 0.78546 0.79210 1.19992 0.97856 0.99189 0.96211 1.18463 0.94452 0.94962 0.92562 1.41826 1.36491 1.07730 1.31211 1.23241 0.94127 0.98226 1.00560 0.75026 0.76434 0.89725 0.88511 0.75472 0.82409 0.83300 0.83515 0.85533 0.76451 1.20846 1.23476 0.84932 0.72998 0.89065 0.89190 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.84 5.60 8.87 -173.53 -1.54 4.06 16 2 C 0.52 -0.06 7.63 87.66 0.67 0.61 16 3 O -0.59 -5.94 16.74 -3.05 -0.05 -5.99 16 4 C -0.13 0.74 4.15 -11.01 -0.05 0.69 16 5 H 0.15 -1.59 8.14 -2.39 -0.02 -1.61 16 6 C -0.13 0.71 7.43 31.12 0.23 0.94 16 7 C 0.12 -0.41 4.24 45.52 0.19 -0.21 16 8 H 0.12 -0.19 7.46 -2.39 -0.02 -0.21 16 9 N -0.71 1.60 5.35 -443.62 -2.37 -0.77 16 10 C 0.59 2.30 7.80 86.55 0.68 2.98 16 11 O -0.55 -6.07 16.44 -4.18 -0.07 -6.14 16 12 C 0.01 0.02 6.97 39.91 0.28 0.30 16 13 C -0.11 -0.51 10.53 22.55 0.24 -0.27 16 14 C -0.13 -0.46 6.16 -21.36 -0.13 -0.59 16 15 C -0.06 0.00 10.06 22.30 0.22 0.22 16 16 C -0.15 0.22 8.59 22.01 0.19 0.41 16 17 C -0.09 0.04 5.40 -19.83 -0.11 -0.07 16 18 C -0.08 0.13 2.81 71.24 0.20 0.33 16 19 O -0.55 -0.90 12.76 -148.98 -1.90 -2.80 16 20 Si 0.77 -2.06 29.75 68.60 2.04 -0.02 16 21 C -0.11 -0.09 9.61 22.37 0.22 0.13 16 22 C 0.11 0.23 7.25 39.13 0.28 0.51 16 23 N -0.57 0.51 6.07 -177.18 -1.08 -0.57 16 24 C -0.12 0.47 7.16 31.12 0.22 0.69 16 25 H 0.42 -5.40 8.83 -92.71 -0.82 -6.22 16 26 H 0.40 -2.74 8.93 -92.71 -0.83 -3.57 16 27 H 0.08 -0.33 8.09 -2.39 -0.02 -0.35 16 28 H 0.10 -0.69 8.14 -2.39 -0.02 -0.71 16 29 H 0.41 -2.72 7.78 -92.71 -0.72 -3.44 16 30 H 0.16 0.56 8.06 -2.91 -0.02 0.53 16 31 H 0.15 -0.62 8.06 -2.91 -0.02 -0.64 16 32 H 0.15 -0.84 4.82 -2.91 -0.01 -0.86 16 33 H 0.13 -0.41 7.96 -2.39 -0.02 -0.43 16 34 H 0.39 -1.39 8.70 -74.06 -0.64 -2.04 16 35 H -0.28 -0.31 7.11 99.48 0.71 0.40 16 36 H -0.31 -1.66 7.11 99.48 0.71 -0.95 16 37 H 0.13 -0.12 8.06 -2.91 -0.02 -0.14 16 38 H 0.43 -2.93 8.12 -92.71 -0.75 -3.69 16 39 H 0.09 -0.43 8.14 -2.39 -0.02 -0.45 16 40 H 0.09 -0.09 7.41 -2.39 -0.02 -0.11 16 Total: 0.00 -25.86 342.67 -4.20 -30.06 By element: Atomic # 1 Polarization: -21.93 SS G_CDS: -2.57 Total: -24.49 kcal Atomic # 6 Polarization: 3.32 SS G_CDS: 3.33 Total: 6.66 kcal Atomic # 7 Polarization: 7.71 SS G_CDS: -4.99 Total: 2.72 kcal Atomic # 8 Polarization: -12.92 SS G_CDS: -2.02 Total: -14.94 kcal Atomic # 14 Polarization: -2.06 SS G_CDS: 2.04 Total: -0.02 kcal Total: -25.86 -4.20 -30.06 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_11684966_13158378.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 6.235 kcal (2) G-P(sol) polarization free energy of solvation -25.862 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -19.627 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.203 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.065 kcal (6) G-S(sol) free energy of system = (1) + (5) -23.830 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds