Wall clock time and date at job start Thu Mar 4 2021 13:06:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34777 * 1 3 3 O 1.21283 * 119.99990 * 2 1 4 4 C 1.50698 * 119.99538 * 180.02562 * 2 1 3 5 5 H 1.08998 * 112.85671 * 48.79915 * 4 2 1 6 6 C 1.53783 * 113.61417 * 179.97438 * 4 2 1 7 7 C 1.53777 * 87.08330 * 139.97615 * 6 4 2 8 8 H 1.09007 * 113.61146 * 89.11590 * 7 6 4 9 9 N 1.46505 * 113.61842 * 220.01971 * 7 6 4 10 10 C 1.34770 * 119.99906 * 205.00425 * 9 7 6 11 11 O 1.21584 * 120.00330 * 359.97438 * 10 9 7 12 12 C 1.47538 * 119.99987 * 179.97438 * 10 9 7 13 13 C 1.39671 * 120.19100 * 359.97438 * 12 10 9 14 14 C 1.37829 * 119.91108 * 180.02562 * 13 12 10 15 15 C 1.38501 * 120.29730 * 359.97438 * 14 13 12 16 16 C 1.50706 * 119.80522 * 180.02562 * 15 14 13 17 17 O 1.42905 * 109.46831 * 245.00185 * 16 15 14 18 18 Si 1.86299 * 109.46813 * 4.99955 * 16 15 14 19 19 C 1.38099 * 120.39232 * 359.97438 * 15 14 13 20 20 C 1.38668 * 120.08155 * 359.76233 * 19 15 14 21 21 O 1.35655 * 120.14936 * 180.27506 * 20 19 15 22 22 C 1.53784 * 87.08320 * 334.57014 * 7 6 4 23 23 H 0.97001 * 120.00485 * 180.02562 * 1 2 3 24 24 H 0.97005 * 119.99790 * 359.71973 * 1 2 3 25 25 H 1.08995 * 113.61515 * 254.52902 * 6 4 2 26 26 H 1.09008 * 113.61377 * 25.43293 * 6 4 2 27 27 H 0.97001 * 119.99761 * 25.00113 * 9 7 6 28 28 H 1.08000 * 120.04503 * 359.97438 * 13 12 10 29 29 H 1.07991 * 119.85166 * 179.97438 * 14 13 12 30 30 H 1.08992 * 109.47286 * 125.00221 * 16 15 14 31 31 H 0.96700 * 113.99174 * 179.97438 * 17 16 15 32 32 H 1.48507 * 109.99849 * 299.99806 * 18 16 15 33 33 H 1.48496 * 110.00291 * 61.32270 * 18 16 15 34 34 H 1.08001 * 119.95792 * 180.02562 * 19 15 14 35 35 H 0.96696 * 114.00063 * 270.23818 * 21 20 19 36 36 H 1.08997 * 113.61037 * 270.88259 * 22 7 6 37 37 H 1.08993 * 113.61578 * 139.98201 * 22 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3478 0.0000 0.0000 3 8 1.9542 1.0503 0.0000 4 6 2.1012 -1.3051 -0.0006 5 1 1.7398 -2.0022 -0.7566 6 6 3.6295 -1.1342 -0.0011 7 6 3.6828 -2.3119 0.9862 8 1 3.7537 -3.2855 0.5011 9 7 4.6665 -2.1356 2.0575 10 6 5.1915 -3.2128 2.6742 11 8 4.8485 -4.3309 2.3418 12 6 6.1825 -3.0353 3.7527 13 6 6.5798 -1.7527 4.1374 14 6 7.5065 -1.5936 5.1452 15 6 8.0459 -2.7004 5.7796 16 6 9.0578 -2.5135 6.8806 17 8 10.3157 -3.0516 6.4677 18 14 9.2494 -0.6968 7.2461 19 6 7.6611 -3.9741 5.4098 20 6 6.7260 -4.1526 4.4016 21 8 6.3429 -5.4030 4.0412 22 6 2.2504 -1.9308 1.3963 23 1 -0.4851 -0.8400 0.0004 24 1 -0.4850 0.8401 0.0041 25 1 4.0926 -1.3502 -0.9639 26 1 3.9633 -0.1894 0.4279 27 1 4.9399 -1.2436 2.3229 28 1 6.1622 -0.8869 3.6452 29 1 7.8133 -0.6015 5.4416 30 1 8.7183 -3.0308 7.7778 31 1 11.0162 -2.9655 7.1288 32 1 9.7122 0.0198 6.0304 33 1 7.9556 -0.1322 7.7070 34 1 8.0860 -4.8322 5.9095 35 1 6.8839 -5.7937 3.3413 36 1 2.2073 -1.2038 2.2072 37 1 1.6004 -2.7899 1.5617 There are 53 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 53 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_11684966_13422076.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:06:18 Heat of formation + Delta-G solvation = -96.718807 kcal Electronic energy + Delta-G solvation = -22924.733512 eV Core-core repulsion = 19248.405842 eV Total energy + Delta-G solvation = -3676.327670 eV No. of doubly occupied orbitals = 53 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 293.114 amu Computer time = 0.71 seconds Orbital eigenvalues (eV) -41.93852 -41.25090 -39.97343 -38.63876 -38.21527 -37.23073 -34.87227 -34.52713 -32.76191 -31.26584 -28.11080 -26.82430 -26.74012 -24.03006 -23.67688 -22.26864 -21.63579 -20.67075 -19.32191 -18.76965 -18.65988 -18.41836 -17.91614 -17.53977 -16.76765 -16.53538 -16.45459 -16.26980 -16.01166 -15.61626 -15.30108 -15.26032 -14.89905 -14.33767 -14.18602 -14.05321 -13.63428 -13.53933 -13.37220 -13.00666 -12.55108 -12.43355 -12.31124 -12.14625 -11.85326 -11.75539 -11.06568 -10.91813 -10.70946 -10.46065 -10.24869 -10.09644 -9.91493 -4.92608 -0.55078 -0.01874 1.26864 1.51161 1.57030 1.68309 1.94469 1.95548 2.41331 2.62481 3.01924 3.23996 3.32455 3.38095 3.46812 3.59121 3.68362 3.73498 3.82309 4.00076 4.11511 4.20607 4.24552 4.47416 4.54378 4.60129 4.62965 4.66431 4.82102 4.84207 4.91922 4.97346 5.07507 5.09366 5.41722 5.44482 5.83565 6.34596 6.41567 6.62980 6.87166 7.03698 7.28727 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.838 5.838 2 C 0.524 3.476 3 O -0.594 6.594 4 C -0.128 4.128 5 H 0.147 0.853 6 C -0.122 4.122 7 C 0.121 3.879 8 H 0.116 0.884 9 N -0.707 5.707 10 C 0.560 3.440 11 O -0.555 6.555 12 C -0.182 4.182 13 C -0.056 4.056 14 C -0.155 4.155 15 C -0.040 4.040 16 C -0.088 4.088 17 O -0.562 6.562 18 Si 0.777 3.223 19 C -0.134 4.134 20 C 0.161 3.839 21 O -0.492 6.492 22 C -0.129 4.129 23 H 0.418 0.582 24 H 0.405 0.595 25 H 0.090 0.910 26 H 0.090 0.910 27 H 0.411 0.589 28 H 0.160 0.840 29 H 0.135 0.865 30 H 0.098 0.902 31 H 0.406 0.594 32 H -0.289 1.289 33 H -0.285 1.285 34 H 0.148 0.852 35 H 0.410 0.590 36 H 0.084 0.916 37 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.765 0.972 2.862 3.118 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.401 5.401 2 C 0.310 3.690 3 O -0.474 6.474 4 C -0.150 4.150 5 H 0.165 0.835 6 C -0.161 4.161 7 C 0.017 3.983 8 H 0.134 0.866 9 N -0.358 5.358 10 C 0.349 3.651 11 O -0.434 6.434 12 C -0.186 4.186 13 C -0.074 4.074 14 C -0.172 4.172 15 C -0.041 4.041 16 C -0.197 4.197 17 O -0.372 6.372 18 Si 0.682 3.318 19 C -0.153 4.153 20 C 0.115 3.885 21 O -0.305 6.305 22 C -0.168 4.168 23 H 0.249 0.751 24 H 0.236 0.764 25 H 0.109 0.891 26 H 0.108 0.892 27 H 0.248 0.752 28 H 0.178 0.822 29 H 0.152 0.848 30 H 0.116 0.884 31 H 0.258 0.742 32 H -0.216 1.216 33 H -0.212 1.212 34 H 0.166 0.834 35 H 0.270 0.730 36 H 0.103 0.897 37 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges 0.025 1.453 2.298 2.719 hybrid contribution -0.450 -0.131 -0.544 0.718 sum -0.425 1.323 1.754 2.237 Atomic orbital electron populations 1.43820 1.06503 1.13798 1.75989 1.20753 0.83366 0.90979 0.73932 1.90740 1.69410 1.35285 1.52015 1.22597 0.96292 0.95010 1.01099 0.83548 1.23233 0.94076 0.98264 1.00496 1.22554 0.87367 1.00378 0.88031 0.86633 1.45846 1.43751 1.09023 1.37215 1.18188 0.80686 0.84723 0.81539 1.90794 1.62002 1.25123 1.65506 1.20472 1.02917 0.94681 1.00498 1.21372 0.94796 0.96021 0.95226 1.21047 0.99678 0.98368 0.98146 1.19837 0.95619 0.92809 0.95787 1.24973 0.85128 1.13027 0.96585 1.86437 1.19596 1.83846 1.47353 0.94092 0.83267 0.71612 0.82863 1.21426 0.96828 0.98348 0.98684 1.18710 0.91872 0.84588 0.93344 1.84702 1.59560 1.26284 1.59950 1.23365 0.97129 1.01178 0.95094 0.75052 0.76388 0.89091 0.89156 0.75178 0.82239 0.84813 0.88396 0.74205 1.21640 1.21214 0.83403 0.72984 0.89744 0.88823 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.84 4.52 8.87 -173.53 -1.54 2.98 16 2 C 0.52 0.72 7.63 87.66 0.67 1.39 16 3 O -0.59 -6.74 16.74 -3.04 -0.05 -6.79 16 4 C -0.13 0.49 4.15 -11.01 -0.05 0.44 16 5 H 0.15 -1.31 8.14 -2.39 -0.02 -1.32 16 6 C -0.12 0.20 7.16 31.12 0.22 0.43 16 7 C 0.12 -0.07 4.24 45.52 0.19 0.13 16 8 H 0.12 0.16 7.47 -2.38 -0.02 0.14 16 9 N -0.71 -0.75 5.31 -443.19 -2.35 -3.10 16 10 C 0.56 4.13 7.76 86.70 0.67 4.80 16 11 O -0.56 -7.79 14.76 16.93 0.25 -7.54 16 12 C -0.18 -1.08 5.89 -20.01 -0.12 -1.20 16 13 C -0.06 -0.09 9.54 22.52 0.21 0.13 16 14 C -0.15 -0.42 8.64 22.24 0.19 -0.22 16 15 C -0.04 -0.13 5.39 -19.83 -0.11 -0.24 16 16 C -0.09 0.21 2.79 71.24 0.20 0.41 16 17 O -0.56 1.23 12.81 -148.98 -1.91 -0.68 16 18 Si 0.78 -3.42 29.83 68.60 2.05 -1.37 16 19 C -0.13 -0.64 9.60 22.34 0.21 -0.43 16 20 C 0.16 1.18 6.72 22.84 0.15 1.33 16 21 O -0.49 -4.10 11.58 -68.79 -0.80 -4.90 16 22 C -0.13 0.38 7.43 31.12 0.23 0.61 16 23 H 0.42 -4.83 8.83 -92.71 -0.82 -5.65 16 24 H 0.41 -2.32 8.93 -92.70 -0.83 -3.15 16 25 H 0.09 -0.26 8.14 -2.39 -0.02 -0.28 16 26 H 0.09 0.10 7.41 -2.38 -0.02 0.08 16 27 H 0.41 -1.34 6.76 -92.71 -0.63 -1.96 16 28 H 0.16 -0.77 6.40 -2.91 -0.02 -0.79 16 29 H 0.13 0.10 4.83 -2.92 -0.01 0.08 16 30 H 0.10 -0.60 7.96 -2.39 -0.02 -0.62 16 31 H 0.41 -5.15 8.74 -74.06 -0.65 -5.80 16 32 H -0.29 -0.66 7.04 99.48 0.70 0.04 16 33 H -0.29 -0.26 7.11 99.48 0.71 0.45 16 34 H 0.15 0.39 8.06 -2.91 -0.02 0.37 16 35 H 0.41 0.49 9.06 -74.06 -0.67 -0.18 16 36 H 0.08 -0.12 8.09 -2.39 -0.02 -0.14 16 37 H 0.09 -0.41 8.14 -2.39 -0.02 -0.43 16 Total: 0.00 -28.95 317.93 -4.03 -32.98 By element: Atomic # 1 Polarization: -16.78 SS G_CDS: -2.37 Total: -19.15 kcal Atomic # 6 Polarization: 4.89 SS G_CDS: 2.69 Total: 7.58 kcal Atomic # 7 Polarization: 3.77 SS G_CDS: -3.89 Total: -0.12 kcal Atomic # 8 Polarization: -17.41 SS G_CDS: -2.51 Total: -19.91 kcal Atomic # 14 Polarization: -3.42 SS G_CDS: 2.05 Total: -1.37 kcal Total: -28.95 -4.03 -32.98 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_11684966_13422076.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -63.739 kcal (2) G-P(sol) polarization free energy of solvation -28.949 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -92.688 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.031 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.980 kcal (6) G-S(sol) free energy of system = (1) + (5) -96.719 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.71 seconds