Wall clock time and date at job start Thu Mar 4 2021 13:07:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34776 * 1 3 3 O 1.21274 * 120.00352 * 2 1 4 4 C 1.50698 * 119.99207 * 180.02562 * 2 1 3 5 5 H 1.08997 * 112.91116 * 48.75026 * 4 2 1 6 6 C 1.53791 * 113.60939 * 179.97438 * 4 2 1 7 7 C 1.53786 * 87.07966 * 139.97988 * 6 4 2 8 8 H 1.08998 * 113.60870 * 89.19954 * 7 6 4 9 9 N 1.46499 * 113.61394 * 220.01815 * 7 6 4 10 10 C 1.34777 * 119.99665 * 205.27970 * 9 7 6 11 11 O 1.21283 * 119.99990 * 359.71991 * 10 9 7 12 12 C 1.50698 * 119.99538 * 179.72653 * 10 9 7 13 13 C 1.52999 * 109.47004 * 179.97438 * 12 10 9 14 14 C 1.52998 * 109.47303 * 179.97438 * 13 12 10 15 15 O 1.42908 * 109.47186 * 179.97438 * 14 13 12 16 16 C 1.35899 * 116.99727 * 180.02562 * 15 14 13 17 17 C 1.38714 * 120.05142 * 180.02562 * 16 15 14 18 18 C 1.38168 * 119.94124 * 180.02562 * 17 16 15 19 19 C 1.50702 * 119.97157 * 180.02562 * 18 17 16 20 20 O 1.42899 * 109.47024 * 300.00001 * 19 18 17 21 21 Si 1.86303 * 109.47062 * 179.97438 * 19 18 17 22 22 C 1.38245 * 120.05757 * 359.97438 * 18 17 16 23 23 C 1.38289 * 120.11166 * 0.02562 * 22 18 17 24 24 C 1.38126 * 120.05427 * 359.67971 * 23 22 18 25 25 C 1.53778 * 87.08287 * 334.56878 * 7 6 4 26 26 H 0.96995 * 120.00844 * 179.97438 * 1 2 3 27 27 H 0.97001 * 119.99611 * 0.02562 * 1 2 3 28 28 H 1.08999 * 113.61698 * 25.43341 * 6 4 2 29 29 H 1.08999 * 113.68992 * 254.53867 * 6 4 2 30 30 H 0.97001 * 119.99790 * 24.99683 * 9 7 6 31 31 H 1.09003 * 109.47112 * 299.99065 * 12 10 9 32 32 H 1.08993 * 109.47916 * 59.99687 * 12 10 9 33 33 H 1.09000 * 109.47527 * 299.99994 * 13 12 10 34 34 H 1.09007 * 109.47302 * 59.99534 * 13 12 10 35 35 H 1.08995 * 109.47540 * 300.00020 * 14 13 12 36 36 H 1.09001 * 109.46719 * 60.00219 * 14 13 12 37 37 H 1.07992 * 120.02926 * 359.97438 * 17 16 15 38 38 H 1.09003 * 109.47092 * 60.00027 * 19 18 17 39 39 H 0.96698 * 114.00244 * 180.02562 * 20 19 18 40 40 H 1.48497 * 109.99859 * 298.68004 * 21 19 18 41 41 H 1.48499 * 109.99857 * 60.00183 * 21 19 18 42 42 H 1.08000 * 119.94381 * 179.97438 * 22 18 17 43 43 H 1.07998 * 119.97432 * 179.97438 * 23 22 18 44 44 H 1.08003 * 120.03018 * 180.32101 * 24 23 22 45 45 H 1.08997 * 113.61721 * 139.97826 * 25 7 6 46 46 H 1.09004 * 113.61436 * 270.88721 * 25 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3478 0.0000 0.0000 3 8 1.9542 1.0502 0.0000 4 6 2.1011 -1.3052 -0.0006 5 1 1.7399 -2.0033 -0.7557 6 6 3.6294 -1.1342 -0.0011 7 6 3.6827 -2.3121 0.9862 8 1 3.7550 -3.2854 0.5011 9 7 4.6664 -2.1358 2.0575 10 6 5.1956 -3.2132 2.6703 11 8 4.8537 -4.3285 2.3384 12 6 6.2120 -3.0320 3.7680 13 6 6.6479 -4.4022 4.2908 14 6 7.6803 -4.2183 5.4048 15 8 8.0870 -5.4982 5.8935 16 6 9.0070 -5.5129 6.8936 17 6 9.4470 -6.7207 7.4150 18 6 10.3820 -6.7329 8.4322 19 6 10.8609 -8.0447 8.9988 20 8 9.7509 -8.7629 9.5411 21 14 12.1091 -7.7215 10.3436 22 6 10.8794 -5.5429 8.9299 23 6 10.4423 -4.3376 8.4117 24 6 9.5123 -4.3201 7.3907 25 6 2.2504 -1.9310 1.3962 26 1 -0.4851 -0.8399 -0.0004 27 1 -0.4849 0.8401 -0.0004 28 1 3.9633 -0.1895 0.4278 29 1 4.0939 -1.3498 -0.9634 30 1 4.9398 -1.2437 2.3228 31 1 7.0789 -2.4997 3.3763 32 1 5.7698 -2.4571 4.5816 33 1 5.7810 -4.9343 4.6826 34 1 7.0901 -4.9776 3.4774 35 1 8.5472 -3.6866 5.0127 36 1 7.2384 -3.6429 6.2183 37 1 9.0584 -7.6505 7.0269 38 1 11.3240 -8.6347 8.2078 39 1 9.9858 -9.6190 9.9244 40 1 13.2828 -7.0033 9.7852 41 1 11.4905 -6.9177 11.4282 42 1 11.6099 -5.5547 9.7252 43 1 10.8321 -3.4093 8.8024 44 1 9.1751 -3.3786 6.9828 45 1 1.6003 -2.7901 1.5615 46 1 2.2072 -1.2039 2.2072 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_11684966_4549616.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:07:16 Heat of formation + Delta-G solvation = -106.103127 kcal Electronic energy + Delta-G solvation = -27012.567486 eV Core-core repulsion = 22869.220024 eV Total energy + Delta-G solvation = -4143.347462 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 335.161 amu Computer time = 1.19 seconds Orbital eigenvalues (eV) -41.63417 -41.35187 -40.50391 -39.19600 -38.51795 -37.35934 -34.94352 -34.74864 -34.29551 -32.67495 -31.38762 -28.77972 -27.12246 -26.76859 -26.59101 -23.84246 -23.68521 -22.13566 -21.78097 -21.49470 -20.46670 -18.97741 -18.60301 -18.42551 -18.14471 -17.87292 -17.51960 -17.49256 -17.05472 -16.64219 -16.42259 -16.35898 -15.89244 -15.45159 -15.41895 -15.11774 -14.69707 -14.63428 -14.50448 -14.31891 -14.03618 -13.65770 -13.52893 -13.38870 -13.31075 -13.19977 -12.62452 -12.47208 -12.40714 -12.31510 -12.24738 -12.10013 -11.77670 -11.72166 -11.65155 -11.04484 -10.87504 -10.68650 -10.43223 -10.08447 -9.96355 -9.37924 -4.93584 0.08383 0.24537 1.27830 1.52804 1.60076 1.65007 1.88222 1.97431 2.30495 2.52466 2.68161 3.36298 3.37529 3.42392 3.60015 3.69697 3.72884 3.79673 3.83317 3.85608 3.86197 3.98910 4.10072 4.16264 4.22319 4.31098 4.33196 4.38127 4.41305 4.53485 4.59297 4.64587 4.64976 4.70855 4.86270 4.87142 4.94990 4.99093 5.08232 5.13848 5.19221 5.21931 5.30461 5.52232 5.58509 5.85744 6.32593 6.43338 6.50984 6.88257 7.21215 7.30900 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.839 5.839 2 C 0.524 3.476 3 O -0.593 6.593 4 C -0.131 4.131 5 H 0.143 0.857 6 C -0.122 4.122 7 C 0.120 3.880 8 H 0.108 0.892 9 N -0.711 5.711 10 C 0.511 3.489 11 O -0.586 6.586 12 C -0.130 4.130 13 C -0.100 4.100 14 C 0.055 3.945 15 O -0.332 6.332 16 C 0.123 3.877 17 C -0.146 4.146 18 C -0.052 4.052 19 C -0.088 4.088 20 O -0.565 6.565 21 Si 0.787 3.213 22 C -0.184 4.184 23 C -0.074 4.074 24 C -0.206 4.206 25 C -0.127 4.127 26 H 0.418 0.582 27 H 0.405 0.595 28 H 0.092 0.908 29 H 0.086 0.914 30 H 0.416 0.584 31 H 0.126 0.874 32 H 0.126 0.874 33 H 0.062 0.938 34 H 0.063 0.937 35 H 0.084 0.916 36 H 0.082 0.918 37 H 0.128 0.872 38 H 0.093 0.907 39 H 0.404 0.596 40 H -0.285 1.285 41 H -0.296 1.296 42 H 0.121 0.879 43 H 0.155 0.845 44 H 0.159 0.841 45 H 0.090 0.910 46 H 0.087 0.913 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.212 0.445 0.865 0.995 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.401 5.401 2 C 0.310 3.690 3 O -0.474 6.474 4 C -0.153 4.153 5 H 0.160 0.840 6 C -0.161 4.161 7 C 0.014 3.986 8 H 0.126 0.874 9 N -0.362 5.362 10 C 0.300 3.700 11 O -0.466 6.466 12 C -0.170 4.170 13 C -0.138 4.138 14 C -0.019 4.019 15 O -0.247 6.247 16 C 0.078 3.922 17 C -0.165 4.165 18 C -0.053 4.053 19 C -0.197 4.197 20 O -0.375 6.375 21 Si 0.692 3.308 22 C -0.202 4.202 23 C -0.092 4.092 24 C -0.224 4.224 25 C -0.166 4.166 26 H 0.249 0.751 27 H 0.236 0.764 28 H 0.110 0.890 29 H 0.105 0.895 30 H 0.254 0.746 31 H 0.144 0.856 32 H 0.144 0.856 33 H 0.080 0.920 34 H 0.081 0.919 35 H 0.102 0.898 36 H 0.100 0.900 37 H 0.146 0.854 38 H 0.111 0.889 39 H 0.255 0.745 40 H -0.212 1.212 41 H -0.224 1.224 42 H 0.138 0.862 43 H 0.172 0.828 44 H 0.176 0.824 45 H 0.108 0.892 46 H 0.105 0.895 Dipole moment (debyes) X Y Z Total from point charges 0.086 1.160 0.756 1.387 hybrid contribution -0.828 0.721 -0.505 1.208 sum -0.742 1.881 0.251 2.038 Atomic orbital electron populations 1.43823 1.06531 1.13777 1.76014 1.20754 0.83348 0.90990 0.73936 1.90737 1.69388 1.35266 1.51994 1.22608 0.96464 0.94957 1.01252 0.83961 1.23219 0.93874 0.98490 1.00467 1.22445 0.87794 0.99833 0.88512 0.87371 1.45944 1.43451 1.09670 1.37159 1.21138 0.81719 0.84081 0.83086 1.90727 1.63162 1.26289 1.66374 1.21548 0.99312 0.98427 0.97667 1.21142 0.98125 0.97487 0.97054 1.23044 0.98655 0.83012 0.97210 1.86061 1.55584 1.33849 1.49160 1.19190 0.89772 0.94536 0.88736 1.20364 1.00179 0.96829 0.99090 1.19515 0.96161 0.94576 0.95016 1.24999 0.96497 0.92256 1.05907 1.86447 1.33510 1.37470 1.80075 0.94320 0.74463 0.86052 0.75981 1.20990 1.03575 0.93187 1.02450 1.21217 0.95005 0.98360 0.94576 1.21585 1.01941 0.97787 1.01127 1.23345 0.97224 1.01044 0.94985 0.75087 0.76402 0.88983 0.89539 0.74645 0.85554 0.85642 0.91953 0.91859 0.89770 0.89994 0.85381 0.88940 0.74474 1.21225 1.22360 0.86180 0.82755 0.82352 0.89155 0.89466 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.84 5.11 8.87 -173.54 -1.54 3.57 16 2 C 0.52 0.30 7.63 87.66 0.67 0.97 16 3 O -0.59 -6.19 16.74 -3.01 -0.05 -6.24 16 4 C -0.13 0.60 4.15 -11.01 -0.05 0.55 16 5 H 0.14 -1.29 8.14 -2.39 -0.02 -1.31 16 6 C -0.12 0.35 7.16 31.13 0.22 0.57 16 7 C 0.12 -0.28 4.24 45.52 0.19 -0.09 16 8 H 0.11 0.08 7.46 -2.39 -0.02 0.06 16 9 N -0.71 2.42 5.35 -440.04 -2.36 0.06 16 10 C 0.51 0.58 7.83 87.66 0.69 1.27 16 11 O -0.59 -6.50 15.58 -3.04 -0.05 -6.54 16 12 C -0.13 0.76 5.70 29.85 0.17 0.93 16 13 C -0.10 -0.04 4.87 30.59 0.15 0.11 16 14 C 0.06 -0.06 4.74 71.98 0.34 0.28 16 15 O -0.33 -2.44 10.14 -92.41 -0.94 -3.38 16 16 C 0.12 0.94 6.69 22.51 0.15 1.10 16 17 C -0.15 -1.38 9.55 22.37 0.21 -1.16 16 18 C -0.05 -0.41 5.42 -19.88 -0.11 -0.52 16 19 C -0.09 -0.18 2.81 71.24 0.20 0.02 16 20 O -0.57 -1.40 12.74 -148.98 -1.90 -3.30 16 21 Si 0.79 -0.78 29.79 68.60 2.04 1.27 16 22 C -0.18 -1.23 8.67 22.28 0.19 -1.04 16 23 C -0.07 -0.25 10.04 22.26 0.22 -0.03 16 24 C -0.21 -0.65 9.04 22.37 0.20 -0.44 16 25 C -0.13 0.57 7.43 31.12 0.23 0.80 16 26 H 0.42 -5.08 8.83 -92.71 -0.82 -5.90 16 27 H 0.41 -2.60 8.93 -92.71 -0.83 -3.43 16 28 H 0.09 -0.04 7.41 -2.39 -0.02 -0.06 16 29 H 0.09 -0.30 8.14 -2.39 -0.02 -0.32 16 30 H 0.42 -3.56 8.73 -92.71 -0.81 -4.36 16 31 H 0.13 -1.38 8.14 -2.39 -0.02 -1.40 16 32 H 0.13 -1.36 8.14 -2.39 -0.02 -1.38 16 33 H 0.06 0.29 8.10 -2.39 -0.02 0.27 16 34 H 0.06 0.28 8.10 -2.38 -0.02 0.26 16 35 H 0.08 -0.42 7.65 -2.39 -0.02 -0.44 16 36 H 0.08 -0.38 7.67 -2.39 -0.02 -0.40 16 37 H 0.13 1.23 8.06 -2.91 -0.02 1.21 16 38 H 0.09 -0.15 7.96 -2.39 -0.02 -0.17 16 39 H 0.40 -3.49 8.74 -74.06 -0.65 -4.14 16 40 H -0.28 -1.08 7.11 99.48 0.71 -0.37 16 41 H -0.30 -1.88 7.11 99.48 0.71 -1.17 16 42 H 0.12 0.64 4.87 -2.91 -0.01 0.63 16 43 H 0.15 -0.37 8.06 -2.91 -0.02 -0.39 16 44 H 0.16 -0.52 6.30 -2.91 -0.02 -0.54 16 45 H 0.09 -0.50 8.14 -2.39 -0.02 -0.52 16 46 H 0.09 -0.31 8.09 -2.39 -0.02 -0.33 16 Total: 0.00 -32.33 385.06 -3.11 -35.44 By element: Atomic # 1 Polarization: -22.19 SS G_CDS: -2.01 Total: -24.20 kcal Atomic # 6 Polarization: -0.37 SS G_CDS: 3.69 Total: 3.32 kcal Atomic # 7 Polarization: 7.53 SS G_CDS: -3.90 Total: 3.63 kcal Atomic # 8 Polarization: -16.52 SS G_CDS: -2.93 Total: -19.45 kcal Atomic # 14 Polarization: -0.78 SS G_CDS: 2.04 Total: 1.27 kcal Total: -32.33 -3.11 -35.44 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_11684966_4549616.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -70.664 kcal (2) G-P(sol) polarization free energy of solvation -32.330 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -102.994 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.109 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.439 kcal (6) G-S(sol) free energy of system = (1) + (5) -106.103 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.20 seconds