Wall clock time and date at job start Thu Mar 4 2021 13:07:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34774 * 1 3 3 O 1.21282 * 120.00476 * 2 1 4 4 C 1.50710 * 119.99929 * 179.97438 * 2 1 3 5 5 H 1.09000 * 112.84778 * 48.80563 * 4 2 1 6 6 C 1.53781 * 113.61551 * 180.02562 * 4 2 1 7 7 C 1.53778 * 87.08050 * 139.98107 * 6 4 2 8 8 H 1.08997 * 113.61742 * 89.20076 * 7 6 4 9 9 N 1.46502 * 113.61373 * 220.02064 * 7 6 4 10 10 C 1.34780 * 119.99852 * 205.00119 * 9 7 6 11 11 O 1.21279 * 119.99721 * 359.97438 * 10 9 7 12 12 C 1.50700 * 119.99797 * 180.02562 * 10 9 7 13 13 O 1.42900 * 109.46759 * 180.02562 * 12 10 9 14 14 C 1.35904 * 117.00131 * 179.97438 * 13 12 10 15 15 C 1.38705 * 120.05898 * 180.29486 * 14 13 12 16 16 C 1.38173 * 119.94106 * 180.29847 * 15 14 13 17 17 C 1.50701 * 119.96798 * 179.70184 * 16 15 14 18 18 O 1.42902 * 109.47202 * 299.97865 * 17 16 15 19 19 Si 1.86305 * 109.47023 * 179.97438 * 17 16 15 20 20 C 1.38232 * 120.05858 * 359.68223 * 16 15 14 21 21 C 1.38294 * 120.11124 * 0.02562 * 20 16 15 22 22 C 1.38122 * 120.05499 * 359.97438 * 21 20 16 23 23 C 1.53779 * 113.61066 * 277.49857 * 4 2 1 24 24 H 0.96998 * 120.00291 * 180.02562 * 1 2 3 25 25 H 0.97001 * 119.99866 * 0.02562 * 1 2 3 26 26 H 1.09002 * 113.61155 * 25.43248 * 6 4 2 27 27 H 1.08992 * 113.69047 * 254.54350 * 6 4 2 28 28 H 0.97005 * 120.00332 * 25.00332 * 9 7 6 29 29 H 1.09000 * 109.47614 * 60.00223 * 12 10 9 30 30 H 1.08994 * 109.47045 * 299.99585 * 12 10 9 31 31 H 1.07997 * 120.03207 * 0.02562 * 15 14 13 32 32 H 1.08997 * 109.47279 * 59.98172 * 17 16 15 33 33 H 0.96699 * 113.99847 * 300.00081 * 18 17 16 34 34 H 1.48492 * 110.00137 * 179.97438 * 19 17 16 35 35 H 1.48495 * 109.99743 * 301.32062 * 19 17 16 36 36 H 1.08002 * 119.94710 * 180.02562 * 20 16 15 37 37 H 1.08000 * 119.97251 * 179.97438 * 21 20 16 38 38 H 1.08002 * 120.02504 * 180.02562 * 22 21 20 39 39 H 1.09004 * 113.61352 * 105.47444 * 23 4 2 40 40 H 1.08992 * 113.62234 * 334.56656 * 23 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3477 0.0000 0.0000 3 8 1.9542 1.0503 0.0000 4 6 2.1013 -1.3052 0.0006 5 1 1.7399 -2.0028 -0.7550 6 6 3.6295 -1.1342 0.0011 7 6 3.6821 -2.3116 0.9890 8 1 3.7548 -3.2852 0.5045 9 7 4.6649 -2.1348 2.0609 10 6 5.1895 -3.2117 2.6785 11 8 4.8476 -4.3271 2.3471 12 6 6.2001 -3.0298 3.7816 13 8 6.6039 -4.3094 4.2733 14 6 7.5189 -4.3236 5.2781 15 6 7.9601 -5.5310 5.7990 16 6 8.8858 -5.5425 6.8246 17 6 9.3606 -6.8539 7.3956 18 8 8.2463 -7.5729 7.9281 19 14 10.5962 -6.5298 8.7517 20 6 9.3772 -4.3522 7.3272 21 6 8.9434 -3.1472 6.8055 22 6 8.0181 -3.1303 5.7802 23 6 2.2500 -1.9299 1.3979 24 1 -0.4850 -0.8400 0.0004 25 1 -0.4850 0.8401 -0.0004 26 1 3.9630 -0.1892 0.4300 27 1 4.0947 -1.3501 -0.9606 28 1 4.9381 -1.2426 2.3263 29 1 5.7539 -2.4531 4.5918 30 1 7.0696 -2.4991 3.3939 31 1 7.5771 -6.4613 5.4062 32 1 9.8310 -7.4436 6.6089 33 1 7.7787 -7.1066 8.6346 34 1 11.0716 -7.8152 9.3235 35 1 11.7449 -5.7551 8.2176 36 1 10.1010 -4.3633 8.1287 37 1 9.3285 -2.2185 7.2002 38 1 7.6800 -2.1889 5.3728 39 1 1.5999 -2.7890 1.5635 40 1 2.2065 -1.2025 2.2084 There are 56 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 56 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_11684966_4860298.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:07:52 Heat of formation + Delta-G solvation = -91.764839 kcal Electronic energy + Delta-G solvation = -23981.484462 eV Core-core repulsion = 20149.833993 eV Total energy + Delta-G solvation = -3831.650469 eV No. of doubly occupied orbitals = 56 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 307.130 amu Computer time = 0.78 seconds Orbital eigenvalues (eV) -41.77192 -41.31174 -40.40026 -39.08783 -38.36349 -37.22076 -34.81768 -34.44345 -32.46427 -31.68288 -29.55456 -27.09859 -26.76881 -26.61129 -23.67084 -23.04376 -21.99545 -21.64743 -20.51692 -19.35335 -18.59690 -18.45414 -17.88330 -17.59424 -17.45158 -17.27233 -16.95167 -16.42329 -16.36548 -16.18051 -15.72286 -15.46232 -15.20992 -15.03281 -14.73290 -14.39778 -14.19763 -14.01367 -13.66666 -13.51800 -13.31320 -12.93756 -12.63080 -12.45020 -12.26100 -12.12410 -11.99928 -11.73255 -11.67429 -11.07201 -10.91185 -10.66972 -10.50930 -10.18404 -9.92313 -9.29137 -4.98639 0.20240 0.38535 1.28081 1.37720 1.47406 1.58695 1.65447 1.97260 2.50044 2.67072 2.72585 3.35165 3.40184 3.50313 3.54766 3.67100 3.69585 3.84357 3.85813 3.99747 4.06629 4.12321 4.23687 4.24660 4.35586 4.49306 4.52262 4.62782 4.64918 4.70633 4.86951 4.95757 4.97707 5.08035 5.24036 5.36649 5.43978 5.45183 5.69052 5.87271 6.25697 6.42720 6.45410 6.74884 7.06848 7.32387 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.839 5.839 2 C 0.525 3.475 3 O -0.592 6.592 4 C -0.131 4.131 5 H 0.143 0.857 6 C -0.120 4.120 7 C 0.121 3.879 8 H 0.109 0.891 9 N -0.701 5.701 10 C 0.515 3.485 11 O -0.570 6.570 12 C 0.036 3.964 13 O -0.322 6.322 14 C 0.114 3.886 15 C -0.150 4.150 16 C -0.084 4.084 17 C -0.086 4.086 18 O -0.558 6.558 19 Si 0.796 3.204 20 C -0.158 4.158 21 C -0.070 4.070 22 C -0.203 4.203 23 C -0.127 4.127 24 H 0.418 0.582 25 H 0.405 0.595 26 H 0.095 0.905 27 H 0.087 0.913 28 H 0.420 0.580 29 H 0.126 0.874 30 H 0.123 0.877 31 H 0.112 0.888 32 H 0.101 0.899 33 H 0.396 0.604 34 H -0.301 1.301 35 H -0.280 1.280 36 H 0.149 0.851 37 H 0.163 0.837 38 H 0.160 0.840 39 H 0.091 0.909 40 H 0.090 0.910 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.464 5.921 2.836 7.013 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.402 5.402 2 C 0.310 3.690 3 O -0.473 6.473 4 C -0.152 4.152 5 H 0.160 0.840 6 C -0.159 4.159 7 C 0.016 3.984 8 H 0.127 0.873 9 N -0.354 5.354 10 C 0.301 3.699 11 O -0.448 6.448 12 C -0.041 4.041 13 O -0.236 6.236 14 C 0.069 3.931 15 C -0.169 4.169 16 C -0.085 4.085 17 C -0.195 4.195 18 O -0.366 6.366 19 Si 0.701 3.299 20 C -0.175 4.175 21 C -0.088 4.088 22 C -0.222 4.222 23 C -0.166 4.166 24 H 0.249 0.751 25 H 0.236 0.764 26 H 0.113 0.887 27 H 0.106 0.894 28 H 0.258 0.742 29 H 0.144 0.856 30 H 0.141 0.859 31 H 0.130 0.870 32 H 0.119 0.881 33 H 0.246 0.754 34 H -0.230 1.230 35 H -0.207 1.207 36 H 0.167 0.833 37 H 0.180 0.820 38 H 0.177 0.823 39 H 0.109 0.891 40 H 0.109 0.891 Dipole moment (debyes) X Y Z Total from point charges -1.289 4.967 2.327 5.635 hybrid contribution -0.636 0.070 -0.888 1.094 sum -1.924 5.037 1.439 5.581 Atomic orbital electron populations 1.43825 1.06547 1.13780 1.76001 1.20734 0.83336 0.90957 0.73958 1.90741 1.69364 1.35229 1.51974 1.22595 0.96443 0.95015 1.01195 0.83954 1.23226 0.93899 0.98383 1.00385 1.22507 0.87579 1.00157 0.88168 0.87292 1.45712 1.43619 1.09133 1.36954 1.20546 0.81646 0.84728 0.82935 1.90758 1.62066 1.26305 1.65715 1.22737 0.99029 0.85306 0.97056 1.86121 1.56701 1.31168 1.49602 1.19196 0.90168 0.95046 0.88716 1.20290 1.00993 0.96259 0.99333 1.20209 0.96482 0.96107 0.95659 1.25424 0.97015 0.91637 1.05382 1.86476 1.45629 1.46852 1.57639 0.93503 0.76155 0.79180 0.81102 1.21219 1.02362 0.91821 1.02105 1.21338 0.94363 0.99063 0.94034 1.21633 1.02151 0.97080 1.01300 1.23357 0.96903 1.01191 0.95141 0.75097 0.76394 0.88659 0.89398 0.74232 0.85643 0.85905 0.87004 0.88147 0.75449 1.22979 1.20675 0.83342 0.81983 0.82292 0.89079 0.89132 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.84 5.69 8.87 -173.53 -1.54 4.15 16 2 C 0.52 -0.17 7.63 87.66 0.67 0.50 16 3 O -0.59 -5.59 16.74 -3.04 -0.05 -5.64 16 4 C -0.13 0.71 4.15 -11.01 -0.05 0.67 16 5 H 0.14 -1.39 8.14 -2.39 -0.02 -1.41 16 6 C -0.12 0.47 7.16 31.12 0.22 0.69 16 7 C 0.12 -0.36 4.24 45.50 0.19 -0.17 16 8 H 0.11 0.04 7.46 -2.39 -0.02 0.02 16 9 N -0.70 2.68 5.35 -440.10 -2.36 0.33 16 10 C 0.52 1.46 7.91 87.66 0.69 2.15 16 11 O -0.57 -8.00 16.10 16.01 0.26 -7.74 16 12 C 0.04 -0.09 5.22 71.24 0.37 0.28 16 13 O -0.32 -2.34 9.67 -73.43 -0.71 -3.05 16 14 C 0.11 0.53 6.69 22.51 0.15 0.68 16 15 C -0.15 -1.03 9.55 22.37 0.21 -0.81 16 16 C -0.08 -0.21 5.39 -19.88 -0.11 -0.31 16 17 C -0.09 -0.17 2.82 71.24 0.20 0.04 16 18 O -0.56 -1.81 12.77 -148.98 -1.90 -3.71 16 19 Si 0.80 -1.59 29.79 68.60 2.04 0.46 16 20 C -0.16 0.31 8.67 22.28 0.19 0.51 16 21 C -0.07 0.28 10.04 22.26 0.22 0.51 16 22 C -0.20 0.46 9.04 22.37 0.20 0.66 16 23 C -0.13 0.68 7.42 31.11 0.23 0.91 16 24 H 0.42 -5.33 8.83 -92.71 -0.82 -6.15 16 25 H 0.41 -2.86 8.93 -92.71 -0.83 -3.69 16 26 H 0.09 -0.18 7.41 -2.39 -0.02 -0.20 16 27 H 0.09 -0.39 8.14 -2.39 -0.02 -0.41 16 28 H 0.42 -4.20 8.73 -92.70 -0.81 -5.01 16 29 H 0.13 -1.12 7.66 -2.39 -0.02 -1.14 16 30 H 0.12 -1.04 7.66 -2.39 -0.02 -1.06 16 31 H 0.11 1.16 8.06 -2.91 -0.02 1.14 16 32 H 0.10 0.41 7.96 -2.39 -0.02 0.39 16 33 H 0.40 -2.13 8.70 -74.06 -0.64 -2.78 16 34 H -0.30 -1.73 7.11 99.48 0.71 -1.02 16 35 H -0.28 -0.48 7.11 99.48 0.71 0.23 16 36 H 0.15 -0.98 4.87 -2.91 -0.01 -0.99 16 37 H 0.16 -1.66 8.06 -2.91 -0.02 -1.68 16 38 H 0.16 -1.43 6.30 -2.91 -0.02 -1.45 16 39 H 0.09 -0.56 8.14 -2.38 -0.02 -0.58 16 40 H 0.09 -0.43 8.09 -2.39 -0.02 -0.45 16 Total: 0.00 -32.36 342.57 -2.78 -35.14 By element: Atomic # 1 Polarization: -24.30 SS G_CDS: -1.93 Total: -26.24 kcal Atomic # 6 Polarization: 2.89 SS G_CDS: 3.41 Total: 6.30 kcal Atomic # 7 Polarization: 8.38 SS G_CDS: -3.90 Total: 4.48 kcal Atomic # 8 Polarization: -17.73 SS G_CDS: -2.41 Total: -20.14 kcal Atomic # 14 Polarization: -1.59 SS G_CDS: 2.04 Total: 0.46 kcal Total: -32.36 -2.78 -35.14 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_11684966_4860298.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -56.626 kcal (2) G-P(sol) polarization free energy of solvation -32.357 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -88.984 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.781 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.138 kcal (6) G-S(sol) free energy of system = (1) + (5) -91.765 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.78 seconds