Wall clock time and date at job start Thu Mar 4 2021 13:07:56
AMSOL-version 7.1
by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers,
I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget,
B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar
Copyright 2004 by Regents of the University of Minnesota.
All rights reserved.
Notice: recipients of this code are asked to comply
with the user agreement in Section 1 of the documentation file.
*******************************************************************************
* 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION
* - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT)
* GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK
* TLIMIT= - A TIME OF 15. SECONDS REQUESTED
* CHARGE - CHARGE ON SYSTEM= 0
* AM1 - THE AM1 HAMILTONIAN TO BE USED
* DEV - DEVELOPER OPTIONS ARE ALLOWED
* SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED
* - CHARGE MODEL 2 WILL BE USED (CM2A)
* - THE SOLVENT IS USER-SPECIFIED
* DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06
* IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345
* ALPHA - THE SOLVENT ALPHA IS 0.00
* BETA - THE SOLVENT BETA IS 0.00
* GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS
* 38.93 CAL MOL^-1 ANGSTROM^-2
* FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00
* FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00
*******************************************************************************
Atom NO. Chemical Bond length Bond angle Dihedral angle
number (k) symbol (angstroms) (degrees) (degrees)
(I) NA:I NB:NA:I NC:NB:NA:I NA NB NC
1 1 C
2 2 O 1.42893 * 1
3 3 C 1.35986 * 117.00346 * 2 1
4 4 C 1.38667 * 120.00413 * 180.02562 * 3 2 1
5 5 C 1.38157 * 120.00159 * 180.02562 * 4 3 2
6 6 C 1.50700 * 120.00062 * 179.97438 * 5 4 3
7 7 O 1.42904 * 109.47257 * 255.02053 * 6 5 4
8 8 Si 1.86300 * 109.47122 * 15.02108 * 6 5 4
9 9 C 1.38677 * 119.99980 * 0.02562 * 5 4 3
10 10 O 1.35978 * 120.00004 * 180.02562 * 9 5 4
11 11 C 1.42896 * 117.00039 * 179.97438 * 10 9 5
12 12 C 1.50700 * 109.47293 * 179.97438 * 11 10 9
13 13 O 1.21279 * 120.00113 * 0.02562 * 12 11 10
14 14 N 1.34784 * 119.99961 * 179.97438 * 12 11 10
15 15 C 1.46494 * 119.99635 * 180.02562 * 14 12 11
16 16 H 1.09000 * 112.85565 * 334.66170 * 15 14 12
17 17 C 1.53785 * 113.61451 * 105.86837 * 15 14 12
18 18 C 1.53954 * 87.01876 * 139.94831 * 17 15 14
19 19 H 1.09002 * 113.53740 * 89.19028 * 18 17 15
20 20 C 1.50696 * 113.73971 * 220.05133 * 18 17 15
21 21 N 1.34779 * 120.00558 * 277.60091 * 20 18 17
22 22 O 1.21282 * 120.00198 * 97.60119 * 20 18 17
23 23 C 1.53773 * 87.11525 * 334.63488 * 18 17 15
24 24 C 1.38715 * 119.99641 * 0.27543 * 9 5 4
25 25 C 1.38113 * 120.00138 * 359.44681 * 24 9 5
26 26 H 1.08998 * 109.47190 * 179.97438 * 1 2 3
27 27 H 1.09007 * 109.47273 * 299.99740 * 1 2 3
28 28 H 1.09000 * 109.47117 * 59.99640 * 1 2 3
29 29 H 1.08005 * 119.99887 * 0.04662 * 4 3 2
30 30 H 1.08998 * 109.47464 * 135.02138 * 6 5 4
31 31 H 0.96695 * 113.99817 * 300.00480 * 7 6 5
32 32 H 1.48497 * 110.00214 * 298.68050 * 8 6 5
33 33 H 1.48502 * 109.99973 * 60.00178 * 8 6 5
34 34 H 1.09004 * 109.47379 * 59.99704 * 11 10 9
35 35 H 1.08997 * 109.47194 * 300.00213 * 11 10 9
36 36 H 0.96995 * 120.00015 * 359.72695 * 14 12 11
37 37 H 1.09001 * 113.60566 * 254.52635 * 17 15 14
38 38 H 1.08989 * 113.61520 * 25.42515 * 17 15 14
39 39 H 0.97004 * 119.99748 * 359.97438 * 21 20 18
40 40 H 0.96999 * 120.00686 * 180.02562 * 21 20 18
41 41 H 1.08995 * 113.61786 * 270.81446 * 23 18 17
42 42 H 1.09000 * 113.69155 * 139.92157 * 23 18 17
43 43 H 1.08009 * 119.99964 * 179.70253 * 24 9 5
44 44 H 1.08005 * 119.99941 * 180.25090 * 25 24 9
Note: An asterisk (*) indicates this parameter was or will be optimized.
Cartesian coordinates (angstroms)
NO. Atom X Y Z
1 6 0.0000 0.0000 0.0000
2 8 1.4289 0.0000 0.0000
3 6 2.0464 1.2116 0.0000
4 6 3.4311 1.2842 -0.0005
5 6 4.0584 2.5152 0.0000
6 6 5.5633 2.5940 0.0000
7 8 6.0208 2.9661 1.3017
8 14 6.2722 0.9326 -0.4560
9 6 3.3031 3.6782 0.0016
10 8 3.9204 4.8898 0.0016
11 6 3.0805 6.0459 0.0027
12 6 3.9347 7.2874 0.0032
13 8 5.1437 7.1917 0.0021
14 7 3.3551 8.5042 0.0038
15 6 4.1855 9.7111 0.0036
16 1 5.1735 9.5452 0.4330
17 6 4.2166 10.4373 -1.3516
18 6 4.1488 11.7540 -0.5567
19 1 5.1275 12.1473 -0.2818
20 6 3.2545 12.7940 -1.1808
21 7 3.7196 13.5721 -2.1782
22 8 2.1161 12.9309 -0.7855
23 6 3.4701 10.9511 0.5655
24 6 1.9179 3.6056 0.0085
25 6 1.2908 2.3750 0.0021
26 1 -0.3633 -1.0276 -0.0005
27 1 -0.3634 0.5138 0.8901
28 1 -0.3633 0.5139 -0.8899
29 1 4.0194 0.3784 -0.0017
30 1 5.8882 3.3393 -0.7260
31 1 5.6902 3.8228 1.6048
32 1 5.8629 -0.0861 0.5440
33 1 5.8039 0.5343 -1.8078
34 1 2.4519 6.0374 0.8932
35 1 2.4506 6.0381 -0.8867
36 1 2.3881 8.5808 -0.0002
37 1 5.1506 10.3031 -1.8973
38 1 3.3358 10.2525 -1.9663
39 1 4.6302 13.4629 -2.4941
40 1 3.1441 14.2418 -2.5797
41 1 2.3847 10.9071 0.4759
42 1 3.8012 11.2304 1.5657
43 1 1.3296 4.5114 0.0146
44 1 0.2123 2.3185 0.0034
There are 62 doubly filled levels
RHF calculation, no. of doubly occupied orbitals= 62
No. of singly occupied orbitals= 1
REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN:
H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987).
REFERENCE FOR CHARGE MODEL 2:
J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885.
REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL:
J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and
D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63
P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted.
CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R
& SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93
& DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV
m_22_11684966_4974302.mol2 44
1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED
SCF FIELD WAS ACHIEVED
Wall clock time and date at job start Thu Mar 4 2021 13:07:56
Heat of formation + Delta-G solvation = -119.970726 kcal
Electronic energy + Delta-G solvation = -28627.574856 eV
Core-core repulsion = 24320.481477 eV
Total energy + Delta-G solvation = -4307.093379 eV
No. of doubly occupied orbitals = 62
and no. of open levels = 1
Molecular weight
(most abundant/longest-lived isotopes) = 337.145 amu
Computer time = 0.86 seconds
Orbital eigenvalues (eV)
-41.93635 -41.60066 -40.63814 -39.85531 -38.57659 -37.91682 -36.84250 -34.84084
-34.51201 -32.82418 -31.17280 -29.72807 -28.16544 -27.05678 -26.93800 -26.49675
-23.94251 -22.47142 -22.36340 -21.73897 -20.65629 -19.58875 -18.90132 -18.69785
-18.43023 -17.97678 -17.90892 -17.58062 -17.41957 -16.75727 -16.71364 -16.53100
-16.04945 -15.80089 -15.64873 -15.48272 -15.33554 -15.03675 -14.75062 -14.38407
-14.15370 -13.90740 -13.75059 -13.67050 -13.48745 -13.38527 -13.09317 -12.69653
-12.61190 -12.35608 -12.28857 -11.99071 -11.88116 -11.56256 -11.13337 -11.02773
-10.90765 -10.85885 -10.76915 -10.25193 -10.12940 -8.86059 -4.68891 0.02615
0.30956 1.33268 1.37146 1.51524 1.53063 1.79499 2.09812 2.21906
2.36244 2.51814 2.57771 3.18329 3.23325 3.37575 3.50527 3.52724
3.61075 3.66083 3.72983 3.81624 3.92567 4.02317 4.03869 4.09171
4.10960 4.13948 4.28656 4.34024 4.44770 4.46393 4.50645 4.52750
4.60585 4.66594 4.77797 4.94085 5.00506 5.07216 5.13957 5.30527
5.36292 5.69426 6.03559 6.23109 6.25284 6.34496 6.75414 6.99139
7.17954
Net atomic charges, atomic populations, and dipole contributions
calculated with CM2
Atom NO. Type Charge No. of electrons
1 C 0.026 3.974
2 O -0.316 6.316
3 C 0.104 3.896
4 C -0.115 4.115
5 C -0.096 4.096
6 C -0.075 4.075
7 O -0.533 6.533
8 Si 0.747 3.253
9 C 0.102 3.898
10 O -0.288 6.288
11 C 0.039 3.961
12 C 0.518 3.482
13 O -0.510 6.510
14 N -0.717 5.717
15 C 0.126 3.874
16 H 0.123 0.877
17 C -0.136 4.136
18 C -0.139 4.139
19 H 0.121 0.879
20 C 0.529 3.471
21 N -0.854 5.854
22 O -0.542 6.542
23 C -0.123 4.123
24 C -0.164 4.164
25 C -0.164 4.164
26 H 0.103 0.897
27 H 0.057 0.943
28 H 0.056 0.944
29 H 0.139 0.861
30 H 0.080 0.920
31 H 0.368 0.632
32 H -0.251 1.251
33 H -0.249 1.249
34 H 0.095 0.905
35 H 0.094 0.906
36 H 0.404 0.596
37 H 0.085 0.915
38 H 0.091 0.909
39 H 0.403 0.597
40 H 0.403 0.597
41 H 0.102 0.898
42 H 0.085 0.915
43 H 0.135 0.865
44 H 0.136 0.864
For the charges calculated by CM2:
Dipole moment (debyes) X Y Z Total
from point charges -1.635 3.246 -2.493 4.407
Note: The Mulliken population analysis charges presented below were not
used in the solvation calculation but are provided for completeness.
The chosen solvation model uses CM2 partial charges for calculating
solvation energies.
Net atomic charges, atomic populations, and dipole contributions
using Mulliken population analysis
Atom NO. Type Charge No. of electrons
1 C -0.069 4.069
2 O -0.230 6.230
3 C 0.059 3.941
4 C -0.133 4.133
5 C -0.098 4.098
6 C -0.184 4.184
7 O -0.339 6.339
8 Si 0.646 3.354
9 C 0.057 3.943
10 O -0.201 6.201
11 C -0.039 4.039
12 C 0.303 3.697
13 O -0.384 6.384
14 N -0.370 5.370
15 C 0.022 3.978
16 H 0.141 0.859
17 C -0.175 4.175
18 C -0.161 4.161
19 H 0.139 0.861
20 C 0.313 3.687
21 N -0.417 5.417
22 O -0.418 6.418
23 C -0.162 4.162
24 C -0.183 4.183
25 C -0.183 4.183
26 H 0.122 0.878
27 H 0.075 0.925
28 H 0.075 0.925
29 H 0.156 0.844
30 H 0.098 0.902
31 H 0.216 0.784
32 H -0.176 1.176
33 H -0.173 1.173
34 H 0.113 0.887
35 H 0.112 0.888
36 H 0.239 0.761
37 H 0.104 0.896
38 H 0.109 0.891
39 H 0.232 0.768
40 H 0.233 0.767
41 H 0.121 0.879
42 H 0.104 0.896
43 H 0.153 0.847
44 H 0.154 0.846
Dipole moment (debyes) X Y Z Total
from point charges -1.031 1.556 -2.352 3.003
hybrid contribution -2.349 1.781 -0.229 2.956
sum -3.380 3.336 -2.581 5.405
Atomic orbital electron populations
1.23111 0.77940 1.04438 1.01393 1.86113 1.21685 1.26281 1.88890
1.18800 0.91831 0.84646 0.98863 1.20128 0.91908 0.97124 1.04188
1.19493 0.96730 0.89867 1.03672 1.25210 0.90538 1.13637 0.89011
1.86696 1.73587 1.41965 1.31603 0.93131 0.91206 0.72070 0.79038
1.18612 0.90740 0.84595 1.00349 1.86110 1.33796 1.10966 1.89214
1.22476 0.93239 0.84139 1.04093 1.20038 0.88841 0.84210 0.76619
1.90785 1.14050 1.86525 1.46997 1.45794 1.10466 1.04843 1.75915
1.22526 0.96565 0.82167 0.96585 0.85926 1.23461 1.03948 0.92600
0.97461 1.22589 1.00537 0.93932 0.99001 0.86103 1.20358 0.87715
0.81340 0.79265 1.43900 1.18576 1.40146 1.39040 1.90764 1.19435
1.69498 1.62146 1.23263 1.01780 0.92789 0.98327 1.21050 0.92868
0.98699 1.05635 1.21089 1.00360 0.91451 1.05400 0.87843 0.92481
0.92516 0.84377 0.90222 0.78404 1.17601 1.17347 0.88720 0.88829
0.76062 0.89630 0.89095 0.76837 0.76663 0.87945 0.89646 0.84708
0.84581
Number of geometries 1
Number of calculations of the screened coulomb radii 1
The total number of SCF iterations 13.
Note: The number of geometries may not
correspond to the number of cycles due to rejected geometry changes.
In the following table subtotal= G_P + SS G_CDS.
Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M
number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value
1 C 0.03 -0.03 9.81 101.05 0.99 0.96 16
2 O -0.32 -0.92 10.50 -19.70 -0.21 -1.13 16
3 C 0.10 0.32 6.69 -39.25 -0.26 0.06 16
4 C -0.12 -0.46 8.59 -39.45 -0.34 -0.79 16
5 C -0.10 -0.34 5.28 -104.49 -0.55 -0.89 16
6 C -0.08 -0.22 2.33 36.01 0.08 -0.14 16
7 O -0.53 -2.03 12.65 -35.23 -0.45 -2.48 16
8 Si 0.75 1.22 30.40 -169.99 -5.17 -3.95 16
9 C 0.10 0.23 6.61 -39.24 -0.26 -0.03 16
10 O -0.29 -0.57 8.56 -39.58 -0.34 -0.91 16
11 C 0.04 -0.06 5.22 36.01 0.19 0.13 16
12 C 0.52 0.14 7.91 -10.98 -0.09 0.05 16
13 O -0.51 -2.40 16.12 -14.35 -0.23 -2.64 16
14 N -0.72 1.73 5.36 -53.01 -0.28 1.45 16
15 C 0.13 -0.27 4.21 -67.11 -0.28 -0.55 16
16 H 0.12 -0.12 7.50 -51.93 -0.39 -0.51 16
17 C -0.14 0.38 7.45 -25.83 -0.19 0.19 16
18 C -0.14 0.38 4.14 -90.87 -0.38 0.00 16
19 H 0.12 -0.55 8.14 -51.93 -0.42 -0.98 16
20 C 0.53 -0.12 7.64 -10.99 -0.08 -0.21 16
21 N -0.85 2.72 8.87 31.22 0.28 3.00 16
22 O -0.54 -2.32 16.74 5.56 0.09 -2.23 16
23 C -0.12 0.28 7.15 -25.92 -0.19 0.10 16
24 C -0.16 -0.07 9.03 -39.45 -0.36 -0.42 16
25 C -0.16 -0.15 9.03 -39.45 -0.36 -0.51 16
26 H 0.10 -0.27 8.14 -51.93 -0.42 -0.70 16
27 H 0.06 -0.12 7.66 -51.92 -0.40 -0.52 16
28 H 0.06 -0.13 7.66 -51.93 -0.40 -0.53 16
29 H 0.14 0.55 4.94 -52.48 -0.26 0.29 16
30 H 0.08 0.21 7.82 -51.93 -0.41 -0.20 16
31 H 0.37 0.89 8.60 45.56 0.39 1.28 16
32 H -0.25 -0.98 6.81 56.52 0.38 -0.60 16
33 H -0.25 -0.72 7.11 56.52 0.40 -0.31 16
34 H 0.09 -0.37 7.65 -51.93 -0.40 -0.77 16
35 H 0.09 -0.36 7.67 -51.93 -0.40 -0.75 16
36 H 0.40 -1.99 8.72 -40.82 -0.36 -2.35 16
37 H 0.09 -0.27 8.14 -51.93 -0.42 -0.69 16
38 H 0.09 -0.21 8.10 -51.94 -0.42 -0.63 16
39 H 0.40 -2.39 8.83 -40.82 -0.36 -2.75 16
40 H 0.40 -1.37 8.93 -40.82 -0.36 -1.74 16
41 H 0.10 -0.14 7.41 -51.93 -0.38 -0.52 16
42 H 0.08 -0.22 8.14 -51.93 -0.42 -0.65 16
43 H 0.14 -0.37 6.29 -52.48 -0.33 -0.70 16
44 H 0.14 -0.21 6.29 -52.48 -0.33 -0.54 16
LS Contribution 370.84 15.07 5.59 5.59
Total: 0.00 -11.70 370.84 -8.49 -20.19
By element:
Atomic # 1 Polarization: -9.14 SS G_CDS: -5.71 Total: -14.85 kcal
Atomic # 6 Polarization: 0.02 SS G_CDS: -2.07 Total: -2.05 kcal
Atomic # 7 Polarization: 4.45 SS G_CDS: -0.01 Total: 4.45 kcal
Atomic # 8 Polarization: -8.25 SS G_CDS: -1.13 Total: -9.38 kcal
Atomic # 14 Polarization: 1.22 SS G_CDS: -5.17 Total: -3.95 kcal
Total LS contribution 5.59 Total: 5.59 kcal
Total: -11.70 -8.49 -20.19 kcal
The number of atoms in the molecule is 44
The average number of expansion shells was 16.00
The maximum number of expansion shells was 16
The minimum number of expansion shells was 16
**** NOTA BENE ****
This is the net solvation energy for this exact molecular structure
(nuclear and electronic)! The standard-state solvation energy should be
obtained as the difference between the heat of formation plus delta-G solvation
for the relaxed solvated system and that for the relaxed gas-phase system.
m_22_11684966_4974302.mol2 44
1SCF run
This is a breakdown of the solvation energy calculated
without geometric relaxation in solution:
(1) E-EN(sol) electronic-nuclear energy of solute -99.777 kcal
(2) G-P(sol) polarization free energy of solvation -11.702 kcal
(3) G-ENP(sol) elect.-nuc.-pol. free energy of system -111.479 kcal
(4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.491 kcal
(5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.194 kcal
(6) G-S(sol) free energy of system = (1) + (5) -119.971 kcal
1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED
Total computer time = 0.86 seconds