Wall clock time and date at job start Thu Mar 4 2021 18:13:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46504 * 1 3 3 N 1.28469 * 124.88242 * 2 1 4 4 C 1.31811 * 110.07011 * 180.15583 * 3 2 1 5 5 C 1.47710 * 126.51885 * 179.81633 * 4 3 2 6 6 O 1.21573 * 120.00016 * 179.69204 * 5 4 3 7 7 N 1.34777 * 119.99649 * 359.96784 * 5 4 3 8 8 C 1.47017 * 125.65341 * 359.75024 * 7 5 4 9 9 C 1.54324 * 107.27277 * 181.01725 * 8 7 5 10 10 C 1.55156 * 102.94272 * 22.19673 * 9 8 7 11 11 O 1.42894 * 111.00373 * 206.38564 * 10 9 8 12 12 Si 1.63099 * 113.99825 * 209.99862 * 11 10 9 13 13 C 1.86297 * 109.47226 * 299.99673 * 12 11 10 14 14 C 1.86299 * 109.47232 * 59.99804 * 12 11 10 15 15 C 1.86304 * 109.46999 * 179.97438 * 12 11 10 16 16 C 1.52996 * 109.47333 * 59.99891 * 15 12 11 17 17 C 1.53002 * 109.46918 * 180.02562 * 15 12 11 18 18 C 1.53005 * 109.46729 * 299.99523 * 15 12 11 19 19 C 1.47426 * 125.64308 * 179.43905 * 7 5 4 20 20 C 1.41502 * 106.96334 * 359.55989 * 4 3 2 21 21 C 1.35028 * 124.88412 * 179.66029 * 2 1 3 22 22 C 1.50703 * 126.38766 * 0.02562 * 21 2 1 23 23 O 1.42900 * 109.46939 * 329.97852 * 22 21 2 24 24 Si 1.86295 * 109.47474 * 209.97476 * 22 21 2 25 25 H 1.48501 * 109.46802 * 60.00346 * 24 22 21 26 26 H 1.48502 * 109.46974 * 180.02562 * 24 22 21 27 27 H 1.48500 * 109.47092 * 300.00198 * 24 22 21 28 28 H 1.08999 * 109.47070 * 270.33957 * 1 2 3 29 29 H 1.08997 * 109.46849 * 30.33790 * 1 2 3 30 30 H 1.09001 * 109.47269 * 150.33683 * 1 2 3 31 31 H 1.09000 * 109.87908 * 300.44174 * 8 7 5 32 32 H 1.09009 * 109.88166 * 61.44619 * 8 7 5 33 33 H 1.09001 * 110.71264 * 140.55508 * 9 8 7 34 34 H 1.08994 * 110.72184 * 263.82632 * 9 8 7 35 35 H 1.08998 * 111.00413 * 82.56454 * 10 9 8 36 36 H 1.08995 * 109.46997 * 59.99829 * 13 12 11 37 37 H 1.08995 * 109.47687 * 180.02562 * 13 12 11 38 38 H 1.09001 * 109.46834 * 300.00263 * 13 12 11 39 39 H 1.09001 * 109.47420 * 60.00127 * 14 12 11 40 40 H 1.09007 * 109.47050 * 180.02562 * 14 12 11 41 41 H 1.08999 * 109.47297 * 299.99829 * 14 12 11 42 42 H 1.09001 * 109.47371 * 59.99809 * 16 15 12 43 43 H 1.08999 * 109.47412 * 180.02562 * 16 15 12 44 44 H 1.09007 * 109.46985 * 299.99992 * 16 15 12 45 45 H 1.08992 * 109.47436 * 59.99758 * 17 15 12 46 46 H 1.08999 * 109.46759 * 179.97438 * 17 15 12 47 47 H 1.09001 * 109.46685 * 299.99517 * 17 15 12 48 48 H 1.08997 * 109.47003 * 60.00819 * 18 15 12 49 49 H 1.09008 * 109.46855 * 180.02562 * 18 15 12 50 50 H 1.08992 * 109.47523 * 300.00180 * 18 15 12 51 51 H 1.09002 * 110.37090 * 274.74541 * 19 7 5 52 52 H 1.08994 * 110.37009 * 37.07145 * 19 7 5 53 53 H 1.08004 * 127.24835 * 180.25802 * 20 4 3 54 54 H 1.09004 * 109.47042 * 89.97481 * 22 21 2 55 55 H 0.96696 * 113.99885 * 299.99724 * 23 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.1997 1.0539 0.0000 4 6 3.4740 0.7169 -0.0034 5 6 4.6273 1.6398 -0.0083 6 8 5.7598 1.1976 -0.0054 7 7 4.4241 2.9722 -0.0104 8 6 3.1139 3.6392 -0.0134 9 6 3.3741 5.1601 -0.0412 10 6 4.8090 5.2566 -0.6234 11 8 5.4597 6.4514 -0.1866 12 14 6.5489 7.0398 -1.2485 13 6 7.8771 5.7676 -1.5449 14 6 5.6969 7.4346 -2.8575 15 6 7.3163 8.5899 -0.5562 16 6 8.0159 8.2663 0.7654 17 6 8.3376 9.1422 -1.5526 18 6 6.2251 9.6346 -0.3133 19 6 5.4789 4.0021 -0.0036 20 6 3.5272 -0.6971 0.0047 21 6 2.2373 -1.1076 0.0066 22 6 1.7534 -2.5348 0.0145 23 8 0.4955 -2.6075 0.6885 24 14 2.9946 -3.6066 0.8986 25 1 3.1535 -3.1301 2.2960 26 1 2.5179 -5.0130 0.9057 27 1 4.3018 -3.5310 0.1981 28 1 -0.3633 0.0061 1.0276 29 1 -0.3633 0.8869 -0.5191 30 1 -0.3634 -0.8930 -0.5086 31 1 2.5494 3.3433 -0.8977 32 1 2.5598 3.3719 0.8865 33 1 2.6589 5.6617 -0.6930 34 1 3.3376 5.5760 0.9656 35 1 4.7938 5.1979 -1.7117 36 1 7.4278 4.8609 -1.9500 37 1 8.6053 6.1609 -2.2542 38 1 8.3755 5.5366 -0.6035 39 1 4.9198 8.1790 -2.6841 40 1 6.4250 7.8274 -3.5673 41 1 5.2476 6.5280 -3.2627 42 1 8.7933 7.5220 0.5924 43 1 8.4645 9.1732 1.1707 44 1 7.2879 7.8730 1.4751 45 1 7.8389 9.3728 -2.4939 46 1 8.7863 10.0493 -1.1478 47 1 9.1150 8.3981 -1.7261 48 1 5.4973 9.2414 0.3964 49 1 6.6742 10.5417 0.0913 50 1 5.7268 9.8651 -1.2548 51 1 5.8023 4.2072 1.0170 52 1 6.3242 3.6835 -0.6135 53 1 4.4109 -1.3181 0.0085 54 1 1.6367 -2.8846 -1.0113 55 1 0.5245 -2.3110 1.6084 RHF calculation, no. of doubly occupied orbitals= 68 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_12102952_13259642.mol2 55 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 18:13:45 Heat of formation + Delta-G solvation = -72.972437 kcal Electronic energy + Delta-G solvation = -32667.867919 eV Core-core repulsion = 28444.383713 eV Total energy + Delta-G solvation = -4223.484205 eV No. of doubly occupied orbitals = 68 Molecular weight (most abundant/longest-lived isotopes) = 369.204 amu Computer time = 1.43 seconds Orbital eigenvalues (eV) -43.87078 -41.08562 -39.13111 -38.01242 -36.83906 -36.71983 -34.42525 -32.79523 -31.77854 -30.11362 -29.28373 -28.99715 -28.28090 -27.84199 -27.37458 -26.71042 -25.23632 -23.24817 -22.20884 -21.94452 -20.44167 -20.34140 -18.91485 -18.50756 -17.81574 -17.62594 -17.11668 -16.65726 -16.45618 -16.16564 -15.83231 -15.77426 -15.45817 -15.25563 -15.12703 -14.88104 -14.75025 -14.50606 -14.40125 -14.25719 -14.08686 -13.90603 -13.58794 -13.52774 -13.42168 -13.36792 -13.24202 -13.04633 -12.95002 -12.93569 -12.87486 -12.54392 -12.39544 -12.37904 -12.11444 -12.07993 -11.78309 -11.74701 -11.65708 -11.54009 -11.40681 -11.21205 -10.90587 -10.40531 -10.23397 -10.07345 -9.97619 -9.77063 0.39013 0.74448 1.13239 1.28348 1.48190 1.49426 1.62759 1.75583 1.91569 1.98339 2.06410 2.19815 2.45143 3.09848 3.26294 3.34895 3.46490 3.56371 3.87456 3.95707 4.08887 4.13336 4.14785 4.26937 4.33230 4.41036 4.45515 4.47441 4.52557 4.53394 4.58297 4.60164 4.71140 4.75204 4.76989 4.78337 4.79051 4.81164 4.82931 4.85168 4.95925 5.01367 5.06348 5.09574 5.10413 5.11211 5.21454 5.24758 5.35694 5.42093 5.45539 5.54703 5.58981 5.63422 5.68733 6.24474 6.49765 6.70781 6.97117 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.076 3.924 2 N -0.258 5.258 3 N -0.250 5.250 4 C -0.038 4.038 5 C 0.612 3.388 6 O -0.572 6.572 7 N -0.606 5.606 8 C 0.110 3.890 9 C -0.127 4.127 10 C 0.103 3.897 11 O -0.615 6.615 12 Si 1.310 2.690 13 C -0.524 4.524 14 C -0.514 4.514 15 C -0.378 4.378 16 C -0.138 4.138 17 C -0.142 4.142 18 C -0.137 4.137 19 C 0.075 3.925 20 C -0.204 4.204 21 C -0.007 4.007 22 C -0.040 4.040 23 O -0.540 6.540 24 Si 0.996 3.004 25 H -0.265 1.265 26 H -0.255 1.255 27 H -0.264 1.264 28 H 0.105 0.895 29 H 0.102 0.898 30 H 0.120 0.880 31 H 0.083 0.917 32 H 0.080 0.920 33 H 0.112 0.888 34 H 0.094 0.906 35 H 0.093 0.907 36 H 0.063 0.937 37 H 0.078 0.922 38 H 0.067 0.933 39 H 0.077 0.923 40 H 0.078 0.922 41 H 0.070 0.930 42 H 0.056 0.944 43 H 0.049 0.951 44 H 0.057 0.943 45 H 0.065 0.935 46 H 0.051 0.949 47 H 0.060 0.940 48 H 0.059 0.941 49 H 0.048 0.952 50 H 0.063 0.937 51 H 0.081 0.919 52 H 0.078 0.922 53 H 0.161 0.839 54 H 0.147 0.853 55 H 0.392 0.608 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.502 0.339 -0.919 7.565 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.062 4.062 2 N -0.048 5.048 3 N -0.088 5.088 4 C -0.195 4.195 5 C 0.400 3.600 6 O -0.451 6.451 7 N -0.339 5.339 8 C -0.012 4.012 9 C -0.165 4.165 10 C 0.046 3.954 11 O -0.573 6.573 12 Si 1.441 2.559 13 C -0.624 4.624 14 C -0.617 4.617 15 C -0.421 4.421 16 C -0.195 4.195 17 C -0.199 4.199 18 C -0.194 4.194 19 C -0.047 4.047 20 C -0.232 4.232 21 C -0.133 4.133 22 C -0.152 4.152 23 O -0.346 6.346 24 Si 0.819 3.181 25 H -0.189 1.189 26 H -0.179 1.179 27 H -0.188 1.188 28 H 0.124 0.876 29 H 0.121 0.879 30 H 0.138 0.862 31 H 0.101 0.899 32 H 0.098 0.902 33 H 0.131 0.869 34 H 0.113 0.887 35 H 0.111 0.889 36 H 0.082 0.918 37 H 0.097 0.903 38 H 0.087 0.913 39 H 0.096 0.904 40 H 0.097 0.903 41 H 0.089 0.911 42 H 0.075 0.925 43 H 0.068 0.932 44 H 0.076 0.924 45 H 0.084 0.916 46 H 0.070 0.930 47 H 0.079 0.921 48 H 0.078 0.922 49 H 0.067 0.933 50 H 0.081 0.919 51 H 0.099 0.901 52 H 0.096 0.904 53 H 0.178 0.822 54 H 0.164 0.836 55 H 0.242 0.758 Dipole moment (debyes) X Y Z Total from point charges -7.469 0.276 -0.790 7.516 hybrid contribution 1.267 -0.038 0.008 1.267 sum -6.202 0.237 -0.783 6.256 Atomic orbital electron populations 1.22705 0.70054 1.06981 1.06445 1.45821 1.09224 1.01644 1.48069 1.73591 1.02220 1.14239 1.18796 1.21534 0.90945 0.93858 1.13165 1.16783 0.86636 0.80567 0.75992 1.90786 1.24246 1.77073 1.52966 1.48166 1.09953 1.04045 1.71762 1.22238 0.83596 0.91669 1.03667 1.22920 0.95269 0.93871 1.04431 1.22721 0.93036 0.81799 0.97889 1.85409 1.65096 1.41232 1.65520 0.76350 0.58602 0.63115 0.57857 1.27299 1.16090 1.13827 1.05231 1.27049 1.09059 1.05812 1.19743 1.25852 1.01846 1.13484 1.00954 1.21555 1.00255 1.01380 0.96359 1.21613 0.98489 1.01153 0.98647 1.21548 0.97722 0.98149 1.01975 1.22957 0.91302 0.87590 1.02877 1.21662 0.97621 0.93687 1.10203 1.22200 0.90458 0.92682 1.07940 1.24663 0.94254 0.91208 1.05069 1.86493 1.28885 1.88763 1.30484 0.85014 0.76304 0.77979 0.78822 1.18909 1.17869 1.18836 0.87635 0.87893 0.86153 0.89915 0.90219 0.86927 0.88700 0.88921 0.91803 0.90270 0.91348 0.90376 0.90263 0.91126 0.92465 0.93165 0.92365 0.91620 0.92959 0.92109 0.92195 0.93281 0.91851 0.90097 0.90402 0.82155 0.83573 0.75838 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 -0.69 10.12 127.77 1.29 0.61 16 2 N -0.26 0.16 3.70 -355.92 -1.32 -1.15 16 3 N -0.25 -1.01 9.50 -48.18 -0.46 -1.47 16 4 C -0.04 -0.33 6.98 42.46 0.30 -0.03 16 5 C 0.61 7.54 7.86 86.75 0.68 8.23 16 6 O -0.57 -11.00 17.18 -3.95 -0.07 -11.07 16 7 N -0.61 -3.96 3.32 -814.89 -2.71 -6.67 16 8 C 0.11 0.01 5.54 86.73 0.48 0.49 16 9 C -0.13 0.42 6.68 31.78 0.21 0.63 16 10 C 0.10 -0.06 2.92 32.07 0.09 0.04 16 11 O -0.61 0.04 8.39 -148.98 -1.25 -1.21 16 12 Si 1.31 -2.46 8.15 68.60 0.56 -1.90 16 13 C -0.52 -0.42 8.25 113.37 0.93 0.51 16 14 C -0.51 1.24 8.59 113.37 0.97 2.22 16 15 C -0.38 0.17 0.53 -10.79 -0.01 0.16 16 16 C -0.14 -0.14 7.85 71.98 0.56 0.42 16 17 C -0.14 0.14 7.85 71.98 0.56 0.71 16 18 C -0.14 0.06 7.85 71.98 0.56 0.62 16 19 C 0.08 0.35 6.31 86.93 0.55 0.89 16 20 C -0.20 -1.26 9.35 22.41 0.21 -1.05 16 21 C -0.01 0.00 6.18 41.40 0.26 0.26 16 22 C -0.04 0.22 2.87 71.24 0.20 0.42 16 23 O -0.54 4.20 10.40 -148.98 -1.55 2.65 16 24 Si 1.00 -2.72 26.63 68.60 1.83 -0.89 16 25 H -0.27 0.04 7.11 99.48 0.71 0.74 16 26 H -0.25 0.35 7.11 99.48 0.71 1.06 16 27 H -0.26 -0.16 6.87 99.48 0.68 0.52 16 28 H 0.11 -1.30 8.14 -2.39 -0.02 -1.32 16 29 H 0.10 -1.06 8.14 -2.39 -0.02 -1.08 16 30 H 0.12 -1.28 6.77 -2.39 -0.02 -1.30 16 31 H 0.08 -0.06 7.67 -2.39 -0.02 -0.08 16 32 H 0.08 0.01 7.75 -2.38 -0.02 0.00 16 33 H 0.11 -0.84 8.14 -2.39 -0.02 -0.86 16 34 H 0.09 -0.29 8.14 -2.39 -0.02 -0.31 16 35 H 0.09 -0.31 6.25 -2.39 -0.01 -0.32 16 36 H 0.06 0.11 6.92 -2.39 -0.02 0.09 16 37 H 0.08 -0.02 7.79 -2.39 -0.02 -0.04 16 38 H 0.07 0.14 7.79 -2.39 -0.02 0.12 16 39 H 0.08 -0.22 7.79 -2.39 -0.02 -0.24 16 40 H 0.08 -0.22 7.79 -2.38 -0.02 -0.24 16 41 H 0.07 -0.20 7.15 -2.39 -0.02 -0.22 16 42 H 0.06 0.03 7.80 -2.39 -0.02 0.01 16 43 H 0.05 0.08 8.14 -2.39 -0.02 0.06 16 44 H 0.06 0.08 7.97 -2.38 -0.02 0.06 16 45 H 0.06 -0.19 7.79 -2.39 -0.02 -0.21 16 46 H 0.05 0.00 8.14 -2.39 -0.02 -0.02 16 47 H 0.06 -0.11 7.79 -2.39 -0.02 -0.13 16 48 H 0.06 -0.02 7.96 -2.39 -0.02 -0.04 16 49 H 0.05 0.03 8.14 -2.38 -0.02 0.01 16 50 H 0.06 -0.14 7.79 -2.39 -0.02 -0.16 16 51 H 0.08 0.42 8.14 -2.39 -0.02 0.40 16 52 H 0.08 0.49 6.71 -2.39 -0.02 0.48 16 53 H 0.16 1.00 6.86 -2.91 -0.02 0.98 16 54 H 0.15 -1.23 7.96 -2.38 -0.02 -1.25 16 55 H 0.39 -5.10 8.70 -74.06 -0.64 -5.74 16 Total: 0.00 -19.51 430.21 3.86 -15.64 By element: Atomic # 1 Polarization: -9.99 SS G_CDS: 0.95 Total: -9.04 kcal Atomic # 6 Polarization: 7.25 SS G_CDS: 7.87 Total: 15.12 kcal Atomic # 7 Polarization: -4.81 SS G_CDS: -4.48 Total: -9.29 kcal Atomic # 8 Polarization: -6.77 SS G_CDS: -2.87 Total: -9.63 kcal Atomic # 14 Polarization: -5.18 SS G_CDS: 2.39 Total: -2.80 kcal Total: -19.51 3.86 -15.64 kcal The number of atoms in the molecule is 55 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12102952_13259642.mol2 55 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -57.331 kcal (2) G-P(sol) polarization free energy of solvation -19.506 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -76.837 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 3.865 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.642 kcal (6) G-S(sol) free energy of system = (1) + (5) -72.972 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.43 seconds