Wall clock time and date at job start Thu Mar 4 2021 15:09:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46503 * 1 3 3 N 1.28468 * 124.88547 * 2 1 4 4 C 1.31802 * 110.07323 * 179.97438 * 3 2 1 5 5 C 1.47714 * 126.52092 * 180.02562 * 4 3 2 6 6 O 1.21565 * 120.00646 * 179.97438 * 5 4 3 7 7 N 1.34783 * 119.99521 * 359.97438 * 5 4 3 8 8 C 1.46498 * 119.99497 * 180.02562 * 7 5 4 9 9 H 1.08998 * 112.85673 * 45.99359 * 8 7 5 10 10 C 1.53787 * 113.61243 * 177.30065 * 8 7 5 11 11 C 1.53781 * 87.08095 * 89.11433 * 10 8 7 12 12 H 1.08997 * 113.61607 * 139.98657 * 11 10 8 13 13 N 1.46511 * 113.68719 * 270.87173 * 11 10 8 14 14 C 1.34770 * 120.00045 * 255.66228 * 13 11 10 15 15 O 1.21510 * 119.99993 * 0.02562 * 14 13 11 16 16 O 1.34637 * 120.00331 * 180.02562 * 14 13 11 17 17 C 1.45192 * 117.00440 * 180.02562 * 16 14 13 18 18 C 1.50701 * 109.47331 * 180.02562 * 17 16 14 19 19 C 1.38235 * 120.00012 * 269.72993 * 18 17 16 20 20 C 1.38241 * 119.99696 * 179.74244 * 19 18 17 21 21 C 1.38229 * 120.00190 * 0.52819 * 20 19 18 22 22 C 1.38242 * 119.99901 * 359.74570 * 21 20 19 23 23 C 1.38231 * 120.00117 * 359.97438 * 22 21 20 24 24 C 1.53773 * 87.08363 * 25.43042 * 11 10 8 25 25 C 1.41502 * 106.96406 * 359.97438 * 4 3 2 26 26 C 1.35031 * 124.88448 * 180.30977 * 2 1 3 27 27 C 1.50699 * 126.38374 * 0.02562 * 26 2 1 28 28 O 1.42899 * 109.47479 * 30.21293 * 27 26 2 29 29 Si 1.86299 * 109.46912 * 150.21217 * 27 26 2 30 30 H 1.09003 * 109.46851 * 89.97395 * 1 2 3 31 31 H 1.08991 * 109.47457 * 209.97583 * 1 2 3 32 32 H 1.09002 * 109.46709 * 329.97826 * 1 2 3 33 33 H 0.96996 * 120.00464 * 359.97438 * 7 5 4 34 34 H 1.08996 * 113.61229 * 203.66284 * 10 8 7 35 35 H 1.09000 * 113.61057 * 334.56450 * 10 8 7 36 36 H 0.96998 * 119.99484 * 75.67019 * 13 11 10 37 37 H 1.09001 * 109.47549 * 300.00198 * 17 16 14 38 38 H 1.08996 * 109.47153 * 60.00507 * 17 16 14 39 39 H 1.07998 * 120.00140 * 359.97438 * 19 18 17 40 40 H 1.08004 * 119.99657 * 180.29574 * 20 19 18 41 41 H 1.07999 * 120.00491 * 179.77052 * 21 20 19 42 42 H 1.07998 * 120.00228 * 180.02562 * 22 21 20 43 43 H 1.07994 * 120.00186 * 179.97438 * 23 22 21 44 44 H 1.08999 * 113.62150 * 220.01585 * 24 11 10 45 45 H 1.09006 * 113.61137 * 89.11414 * 24 11 10 46 46 H 1.07999 * 127.24970 * 180.02562 * 25 4 3 47 47 H 1.09001 * 109.47389 * 270.20793 * 27 26 2 48 48 H 0.96705 * 113.99602 * 59.99685 * 28 27 26 49 49 H 1.48498 * 110.00277 * 58.67981 * 29 27 26 50 50 H 1.48501 * 110.00269 * 180.02562 * 29 27 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.1998 1.0538 0.0000 4 6 3.4740 0.7169 0.0006 5 6 4.6274 1.6398 0.0013 6 8 5.7598 1.1977 0.0022 7 7 4.4241 2.9722 0.0009 8 6 5.5680 3.8875 0.0010 9 1 6.3348 3.6070 -0.7211 10 6 5.1696 5.3713 -0.0658 11 6 5.1212 5.3464 1.4710 12 1 5.5274 6.2451 1.9353 13 7 3.8138 4.9676 2.0128 14 6 3.0039 5.9079 2.5383 15 8 3.3579 7.0701 2.5624 16 8 1.8026 5.5598 3.0366 17 6 0.9830 6.6248 3.5861 18 6 -0.3145 6.0497 4.0930 19 6 -1.4079 5.9638 3.2516 20 6 -2.5965 5.4313 3.7151 21 6 -2.6949 4.9949 5.0230 22 6 -1.6031 5.0861 5.8660 23 6 -0.4128 5.6132 5.4010 24 6 6.1220 4.1808 1.4053 25 6 3.5271 -0.6972 0.0015 26 6 2.2373 -1.1077 -0.0060 27 6 1.7534 -2.5348 -0.0142 28 8 0.4980 -2.6083 -0.6931 29 14 2.9979 -3.6074 -0.8925 30 1 -0.3633 0.0005 -1.0277 31 1 -0.3634 -0.8901 0.5134 32 1 -0.3633 0.8898 0.5142 33 1 3.5206 3.3250 -0.0002 34 1 5.9514 6.0157 -0.4677 35 1 4.1985 5.5421 -0.5305 36 1 3.5311 4.0399 1.9933 37 1 1.5136 7.1040 4.4089 38 1 0.7756 7.3611 2.8096 39 1 -1.3325 6.3091 2.2311 40 1 -3.4493 5.3597 3.0563 41 1 -3.6245 4.5824 5.3862 42 1 -1.6797 4.7448 6.8878 43 1 0.4400 5.6848 6.0597 44 1 5.9200 3.3904 2.1283 45 1 7.1644 4.4997 1.4056 46 1 4.4108 -1.3181 0.0026 47 1 1.6327 -2.8836 1.0114 48 1 0.5307 -2.3126 -1.6133 49 1 4.3161 -3.5150 -0.2149 50 1 2.5321 -5.0174 -0.9080 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_12109458_13259642.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 15:09:49 Heat of formation + Delta-G solvation = 2.837639 kcal Electronic energy + Delta-G solvation = -35747.874955 eV Core-core repulsion = 30938.183657 eV Total energy + Delta-G solvation = -4809.691298 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 387.167 amu Computer time = 1.27 seconds Orbital eigenvalues (eV) -43.84869 -41.90220 -40.96656 -40.10922 -39.24469 -38.20296 -37.27702 -34.96937 -34.51006 -33.79787 -32.98593 -32.52810 -31.92884 -28.75369 -27.69515 -26.98449 -26.89423 -25.83465 -24.17755 -23.61630 -22.75087 -22.24619 -22.08430 -20.99565 -20.82173 -19.66874 -19.20633 -18.20045 -17.71230 -17.60690 -17.52079 -17.39483 -17.22188 -16.96967 -16.51627 -16.22303 -16.08532 -16.03891 -15.93351 -15.62757 -15.31424 -15.13202 -14.86539 -14.65146 -14.47845 -14.24130 -14.06773 -13.94621 -13.83355 -13.65923 -13.53190 -13.41352 -13.32502 -13.02336 -12.68888 -12.41669 -12.19047 -12.15371 -12.08362 -11.80753 -11.60248 -11.56662 -11.52683 -11.12074 -11.04255 -10.33934 -10.21376 -10.00692 -9.98901 -9.93660 -9.91471 -5.11489 0.08977 0.38888 0.50150 0.79656 1.10349 1.24578 1.44211 1.60284 1.81831 1.87784 2.05725 2.40429 2.72795 2.99097 3.20303 3.25681 3.26967 3.28242 3.47017 3.67095 3.73058 3.76523 3.91833 3.99470 4.02427 4.02709 4.12417 4.18434 4.18862 4.26860 4.30600 4.40495 4.45531 4.48434 4.56320 4.59311 4.61643 4.65708 4.69066 4.75169 4.87092 4.89050 4.91845 5.01066 5.23665 5.27992 5.35512 5.44345 5.50143 5.51312 5.53665 5.60218 5.94360 6.15684 6.33094 6.38852 6.82450 7.19153 7.33156 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.084 3.916 2 N -0.261 5.261 3 N -0.255 5.255 4 C -0.019 4.019 5 C 0.610 3.390 6 O -0.521 6.521 7 N -0.708 5.708 8 C 0.120 3.880 9 H 0.103 0.897 10 C -0.154 4.154 11 C 0.134 3.866 12 H 0.112 0.888 13 N -0.694 5.694 14 C 0.650 3.350 15 O -0.567 6.567 16 O -0.365 6.365 17 C 0.130 3.870 18 C -0.102 4.102 19 C -0.093 4.093 20 C -0.124 4.124 21 C -0.107 4.107 22 C -0.124 4.124 23 C -0.093 4.093 24 C -0.153 4.153 25 C -0.176 4.176 26 C -0.017 4.017 27 C -0.043 4.043 28 O -0.541 6.541 29 Si 0.717 3.283 30 H 0.088 0.912 31 H 0.108 0.892 32 H 0.093 0.907 33 H 0.406 0.594 34 H 0.114 0.886 35 H 0.081 0.919 36 H 0.406 0.594 37 H 0.081 0.919 38 H 0.082 0.918 39 H 0.125 0.875 40 H 0.126 0.874 41 H 0.125 0.875 42 H 0.126 0.874 43 H 0.125 0.875 44 H 0.081 0.919 45 H 0.114 0.886 46 H 0.166 0.834 47 H 0.125 0.875 48 H 0.382 0.618 49 H -0.249 1.249 50 H -0.248 1.248 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.464 -1.778 -2.456 5.397 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.056 4.056 2 N -0.050 5.050 3 N -0.092 5.092 4 C -0.178 4.178 5 C 0.394 3.606 6 O -0.394 6.394 7 N -0.362 5.362 8 C 0.015 3.985 9 H 0.121 0.879 10 C -0.193 4.193 11 C 0.029 3.971 12 H 0.130 0.870 13 N -0.353 5.353 14 C 0.403 3.597 15 O -0.456 6.456 16 O -0.279 6.279 17 C 0.056 3.944 18 C -0.102 4.102 19 C -0.111 4.111 20 C -0.142 4.142 21 C -0.125 4.125 22 C -0.142 4.142 23 C -0.111 4.111 24 C -0.193 4.193 25 C -0.204 4.204 26 C -0.142 4.142 27 C -0.154 4.154 28 O -0.346 6.346 29 Si 0.616 3.384 30 H 0.106 0.894 31 H 0.126 0.874 32 H 0.112 0.888 33 H 0.243 0.757 34 H 0.133 0.867 35 H 0.099 0.901 36 H 0.242 0.758 37 H 0.100 0.900 38 H 0.100 0.900 39 H 0.143 0.857 40 H 0.144 0.856 41 H 0.143 0.857 42 H 0.144 0.856 43 H 0.143 0.857 44 H 0.099 0.901 45 H 0.132 0.868 46 H 0.184 0.816 47 H 0.142 0.858 48 H 0.230 0.770 49 H -0.173 1.173 50 H -0.173 1.173 Dipole moment (debyes) X Y Z Total from point charges -4.026 -1.463 -1.751 4.627 hybrid contribution -0.510 -0.468 0.622 0.930 sum -4.536 -1.930 -1.129 5.057 Atomic orbital electron populations 1.22361 0.72364 1.05895 1.04932 1.45344 1.07994 1.02078 1.49564 1.73517 1.02801 1.14052 1.18860 1.21736 0.90723 0.93839 1.11492 1.16845 0.86685 0.81142 0.75900 1.90833 1.22458 1.76961 1.49177 1.45689 1.09901 1.05221 1.75338 1.21970 0.89041 0.89199 0.98254 0.87934 1.23799 1.03858 0.95089 0.96575 1.21951 0.81361 0.99635 0.94111 0.87041 1.44459 1.17271 1.10242 1.63347 1.18096 0.80113 0.84441 0.77049 1.91025 1.75431 1.17643 1.61457 1.86312 1.27566 1.41250 1.72769 1.21747 0.87060 0.86882 0.98673 1.19503 0.93794 1.02403 0.94492 1.21115 0.92666 0.97984 0.99331 1.21203 0.97805 0.99037 0.96128 1.21304 0.98795 0.98520 0.93900 1.21212 0.93034 0.99727 1.00179 1.21127 0.98063 0.96845 0.95091 1.23791 0.99855 0.97861 0.97758 1.21526 0.96468 0.93855 1.08504 1.21961 0.91249 0.91489 1.09484 1.24851 0.94380 0.93508 1.02679 1.86500 1.29845 1.88902 1.29380 0.94062 0.76546 0.78124 0.89696 0.89378 0.87402 0.88797 0.75748 0.86729 0.90075 0.75772 0.90034 0.89988 0.85693 0.85559 0.85668 0.85566 0.85715 0.90057 0.86823 0.81641 0.85823 0.77047 1.17314 1.17278 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 -0.28 10.11 59.85 0.61 0.33 16 2 N -0.26 0.05 3.70 -63.85 -0.24 -0.18 16 3 N -0.26 -0.37 11.67 33.42 0.39 0.02 16 4 C -0.02 -0.05 7.13 -82.77 -0.59 -0.64 16 5 C 0.61 1.80 7.83 -12.39 -0.10 1.70 16 6 O -0.52 -3.06 16.86 5.31 0.09 -2.97 16 7 N -0.71 -0.22 4.34 -54.00 -0.23 -0.45 16 8 C 0.12 -0.08 4.00 -67.11 -0.27 -0.35 16 9 H 0.10 -0.02 8.04 -51.93 -0.42 -0.44 16 10 C -0.15 0.26 7.57 -25.92 -0.20 0.06 16 11 C 0.13 -0.05 4.28 -67.12 -0.29 -0.33 16 12 H 0.11 0.06 7.54 -51.93 -0.39 -0.33 16 13 N -0.69 -0.54 4.97 -57.93 -0.29 -0.83 16 14 C 0.65 2.14 8.75 54.05 0.47 2.61 16 15 O -0.57 -3.43 15.77 -19.28 -0.30 -3.73 16 16 O -0.36 -0.98 10.25 -40.32 -0.41 -1.40 16 17 C 0.13 0.20 5.60 36.01 0.20 0.40 16 18 C -0.10 -0.12 5.52 -104.62 -0.58 -0.70 16 19 C -0.09 -0.05 9.70 -39.58 -0.38 -0.43 16 20 C -0.12 0.01 10.05 -39.58 -0.40 -0.39 16 21 C -0.11 0.01 10.05 -39.58 -0.40 -0.39 16 22 C -0.12 -0.03 10.05 -39.58 -0.40 -0.43 16 23 C -0.09 -0.08 9.70 -39.58 -0.38 -0.46 16 24 C -0.15 0.15 7.61 -25.92 -0.20 -0.05 16 25 C -0.18 -0.27 9.35 -39.37 -0.37 -0.64 16 26 C -0.02 0.00 6.17 -82.21 -0.51 -0.50 16 27 C -0.04 0.09 2.87 36.01 0.10 0.20 16 28 O -0.54 1.63 10.42 -35.23 -0.37 1.27 16 29 Si 0.72 -1.63 31.37 -169.99 -5.33 -6.96 16 30 H 0.09 -0.44 8.14 -51.93 -0.42 -0.86 16 31 H 0.11 -0.39 6.80 -51.93 -0.35 -0.75 16 32 H 0.09 -0.33 8.14 -51.93 -0.42 -0.76 16 33 H 0.41 -0.20 7.56 -40.82 -0.31 -0.51 16 34 H 0.11 -0.36 8.14 -51.93 -0.42 -0.78 16 35 H 0.08 -0.09 8.13 -51.93 -0.42 -0.51 16 36 H 0.41 0.04 7.31 -40.82 -0.30 -0.26 16 37 H 0.08 0.10 8.08 -51.93 -0.42 -0.32 16 38 H 0.08 0.09 8.08 -51.93 -0.42 -0.33 16 39 H 0.13 -0.11 8.06 -52.49 -0.42 -0.53 16 40 H 0.13 -0.25 8.06 -52.48 -0.42 -0.67 16 41 H 0.13 -0.24 8.06 -52.49 -0.42 -0.67 16 42 H 0.13 -0.19 8.06 -52.49 -0.42 -0.61 16 43 H 0.12 -0.05 8.06 -52.49 -0.42 -0.47 16 44 H 0.08 0.04 8.14 -51.93 -0.42 -0.39 16 45 H 0.11 -0.27 8.14 -51.93 -0.42 -0.70 16 46 H 0.17 0.21 6.84 -52.49 -0.36 -0.15 16 47 H 0.12 -0.25 7.96 -51.93 -0.41 -0.66 16 48 H 0.38 -2.42 8.70 45.56 0.40 -2.02 16 49 H -0.25 -0.11 6.83 56.52 0.39 0.28 16 50 H -0.25 -0.11 7.11 56.52 0.40 0.29 16 LS Contribution 425.67 15.07 6.41 6.41 Total: 0.00 -10.18 425.67 -10.80 -20.98 By element: Atomic # 1 Polarization: -5.29 SS G_CDS: -6.85 Total: -12.14 kcal Atomic # 6 Polarization: 3.66 SS G_CDS: -3.67 Total: -0.01 kcal Atomic # 7 Polarization: -1.08 SS G_CDS: -0.37 Total: -1.44 kcal Atomic # 8 Polarization: -5.84 SS G_CDS: -1.00 Total: -6.84 kcal Atomic # 14 Polarization: -1.63 SS G_CDS: -5.33 Total: -6.96 kcal Total LS contribution 6.41 Total: 6.41 kcal Total: -10.18 -10.80 -20.98 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12109458_13259642.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 23.816 kcal (2) G-P(sol) polarization free energy of solvation -10.182 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 13.634 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.796 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.978 kcal (6) G-S(sol) free energy of system = (1) + (5) 2.838 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.27 seconds