Wall clock time and date at job start Thu Mar 4 2021 15:09:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46503 * 1 3 3 N 1.28468 * 124.88547 * 2 1 4 4 C 1.31802 * 110.07323 * 179.97438 * 3 2 1 5 5 C 1.47714 * 126.52092 * 180.02562 * 4 3 2 6 6 O 1.21565 * 120.00646 * 179.97438 * 5 4 3 7 7 N 1.34783 * 119.99521 * 359.97438 * 5 4 3 8 8 C 1.46498 * 119.99497 * 180.02562 * 7 5 4 9 9 H 1.08998 * 112.85673 * 45.99359 * 8 7 5 10 10 C 1.53787 * 113.61243 * 177.30065 * 8 7 5 11 11 C 1.53781 * 87.08095 * 89.11433 * 10 8 7 12 12 H 1.08997 * 113.61607 * 139.98657 * 11 10 8 13 13 N 1.46511 * 113.68719 * 270.87173 * 11 10 8 14 14 C 1.34770 * 120.00045 * 255.66228 * 13 11 10 15 15 O 1.21510 * 119.99993 * 0.02562 * 14 13 11 16 16 O 1.34637 * 120.00331 * 180.02562 * 14 13 11 17 17 C 1.45192 * 117.00440 * 180.02562 * 16 14 13 18 18 C 1.50701 * 109.47331 * 180.02562 * 17 16 14 19 19 C 1.38235 * 120.00012 * 269.72993 * 18 17 16 20 20 C 1.38241 * 119.99696 * 179.74244 * 19 18 17 21 21 C 1.38229 * 120.00190 * 0.52819 * 20 19 18 22 22 C 1.38242 * 119.99901 * 359.74570 * 21 20 19 23 23 C 1.38231 * 120.00117 * 359.97438 * 22 21 20 24 24 C 1.53773 * 87.08363 * 25.43042 * 11 10 8 25 25 C 1.41502 * 106.96406 * 359.97438 * 4 3 2 26 26 C 1.35031 * 124.88448 * 180.30977 * 2 1 3 27 27 C 1.50699 * 126.38374 * 0.02562 * 26 2 1 28 28 O 1.42899 * 109.47479 * 30.21293 * 27 26 2 29 29 Si 1.86299 * 109.46912 * 150.21217 * 27 26 2 30 30 H 1.09003 * 109.46851 * 89.97395 * 1 2 3 31 31 H 1.08991 * 109.47457 * 209.97583 * 1 2 3 32 32 H 1.09002 * 109.46709 * 329.97826 * 1 2 3 33 33 H 0.96996 * 120.00464 * 359.97438 * 7 5 4 34 34 H 1.08996 * 113.61229 * 203.66284 * 10 8 7 35 35 H 1.09000 * 113.61057 * 334.56450 * 10 8 7 36 36 H 0.96998 * 119.99484 * 75.67019 * 13 11 10 37 37 H 1.09001 * 109.47549 * 300.00198 * 17 16 14 38 38 H 1.08996 * 109.47153 * 60.00507 * 17 16 14 39 39 H 1.07998 * 120.00140 * 359.97438 * 19 18 17 40 40 H 1.08004 * 119.99657 * 180.29574 * 20 19 18 41 41 H 1.07999 * 120.00491 * 179.77052 * 21 20 19 42 42 H 1.07998 * 120.00228 * 180.02562 * 22 21 20 43 43 H 1.07994 * 120.00186 * 179.97438 * 23 22 21 44 44 H 1.08999 * 113.62150 * 220.01585 * 24 11 10 45 45 H 1.09006 * 113.61137 * 89.11414 * 24 11 10 46 46 H 1.07999 * 127.24970 * 180.02562 * 25 4 3 47 47 H 1.09001 * 109.47389 * 270.20793 * 27 26 2 48 48 H 0.96705 * 113.99602 * 59.99685 * 28 27 26 49 49 H 1.48498 * 110.00277 * 58.67981 * 29 27 26 50 50 H 1.48501 * 110.00269 * 180.02562 * 29 27 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.1998 1.0538 0.0000 4 6 3.4740 0.7169 0.0006 5 6 4.6274 1.6398 0.0013 6 8 5.7598 1.1977 0.0022 7 7 4.4241 2.9722 0.0009 8 6 5.5680 3.8875 0.0010 9 1 6.3348 3.6070 -0.7211 10 6 5.1696 5.3713 -0.0658 11 6 5.1212 5.3464 1.4710 12 1 5.5274 6.2451 1.9353 13 7 3.8138 4.9676 2.0128 14 6 3.0039 5.9079 2.5383 15 8 3.3579 7.0701 2.5624 16 8 1.8026 5.5598 3.0366 17 6 0.9830 6.6248 3.5861 18 6 -0.3145 6.0497 4.0930 19 6 -1.4079 5.9638 3.2516 20 6 -2.5965 5.4313 3.7151 21 6 -2.6949 4.9949 5.0230 22 6 -1.6031 5.0861 5.8660 23 6 -0.4128 5.6132 5.4010 24 6 6.1220 4.1808 1.4053 25 6 3.5271 -0.6972 0.0015 26 6 2.2373 -1.1077 -0.0060 27 6 1.7534 -2.5348 -0.0142 28 8 0.4980 -2.6083 -0.6931 29 14 2.9979 -3.6074 -0.8925 30 1 -0.3633 0.0005 -1.0277 31 1 -0.3634 -0.8901 0.5134 32 1 -0.3633 0.8898 0.5142 33 1 3.5206 3.3250 -0.0002 34 1 5.9514 6.0157 -0.4677 35 1 4.1985 5.5421 -0.5305 36 1 3.5311 4.0399 1.9933 37 1 1.5136 7.1040 4.4089 38 1 0.7756 7.3611 2.8096 39 1 -1.3325 6.3091 2.2311 40 1 -3.4493 5.3597 3.0563 41 1 -3.6245 4.5824 5.3862 42 1 -1.6797 4.7448 6.8878 43 1 0.4400 5.6848 6.0597 44 1 5.9200 3.3904 2.1283 45 1 7.1644 4.4997 1.4056 46 1 4.4108 -1.3181 0.0026 47 1 1.6327 -2.8836 1.0114 48 1 0.5307 -2.3126 -1.6133 49 1 4.3161 -3.5150 -0.2149 50 1 2.5321 -5.0174 -0.9080 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_12109458_13259642.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 15:09:47 Heat of formation + Delta-G solvation = 1.966894 kcal Electronic energy + Delta-G solvation = -35747.912713 eV Core-core repulsion = 30938.183657 eV Total energy + Delta-G solvation = -4809.729057 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 387.167 amu Computer time = 1.61 seconds Orbital eigenvalues (eV) -43.87294 -42.03508 -41.10232 -40.14412 -39.37998 -38.01863 -37.50144 -35.14179 -34.51209 -33.85868 -33.01136 -32.51868 -31.90191 -28.68533 -27.75089 -26.92932 -26.82187 -25.83897 -24.25134 -23.59371 -22.84228 -22.28544 -22.14473 -21.08094 -20.85656 -19.80770 -19.14428 -18.29662 -17.79749 -17.65835 -17.57090 -17.45009 -17.18113 -16.95784 -16.53359 -16.27661 -16.12217 -16.02505 -15.90473 -15.57649 -15.40538 -15.10305 -14.96312 -14.74516 -14.48665 -14.27213 -14.01966 -13.97616 -13.66242 -13.55364 -13.45630 -13.38749 -13.37705 -13.02714 -12.62286 -12.37653 -12.21801 -12.16634 -12.11158 -11.86583 -11.83445 -11.75997 -11.56534 -11.30677 -10.93103 -10.46439 -10.28107 -10.04217 -9.98963 -9.92496 -9.91908 -4.97335 0.06232 0.40122 0.40386 0.79040 1.13906 1.18820 1.53076 1.57337 1.70401 1.95261 2.03211 2.23994 2.71631 3.12571 3.17813 3.28590 3.30017 3.33558 3.49193 3.65182 3.72016 3.74846 3.99361 4.03028 4.04677 4.16760 4.19436 4.23652 4.29131 4.35115 4.40134 4.47088 4.52765 4.55554 4.60197 4.63972 4.65917 4.72475 4.73184 4.78797 4.92303 4.92646 4.94083 5.05346 5.12816 5.18809 5.24413 5.45458 5.50750 5.51337 5.52944 5.65787 5.97971 6.17295 6.28358 6.56177 6.78069 7.04458 7.12320 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.077 3.923 2 N -0.257 5.257 3 N -0.260 5.260 4 C -0.040 4.040 5 C 0.608 3.392 6 O -0.559 6.559 7 N -0.696 5.696 8 C 0.115 3.885 9 H 0.101 0.899 10 C -0.139 4.139 11 C 0.127 3.873 12 H 0.105 0.895 13 N -0.683 5.683 14 C 0.648 3.352 15 O -0.598 6.598 16 O -0.368 6.368 17 C 0.130 3.870 18 C -0.115 4.115 19 C -0.103 4.103 20 C -0.129 4.129 21 C -0.113 4.113 22 C -0.133 4.133 23 C -0.107 4.107 24 C -0.146 4.146 25 C -0.196 4.196 26 C -0.006 4.006 27 C -0.035 4.035 28 O -0.543 6.543 29 Si 0.788 3.212 30 H 0.110 0.890 31 H 0.115 0.885 32 H 0.097 0.903 33 H 0.411 0.589 34 H 0.135 0.865 35 H 0.079 0.921 36 H 0.410 0.590 37 H 0.079 0.921 38 H 0.084 0.916 39 H 0.135 0.865 40 H 0.145 0.855 41 H 0.144 0.856 42 H 0.141 0.859 43 H 0.130 0.870 44 H 0.066 0.934 45 H 0.131 0.869 46 H 0.161 0.839 47 H 0.127 0.873 48 H 0.398 0.602 49 H -0.291 1.291 50 H -0.282 1.282 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.081 -1.871 -3.003 7.035 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.061 4.061 2 N -0.046 5.046 3 N -0.098 5.098 4 C -0.198 4.198 5 C 0.394 3.606 6 O -0.435 6.435 7 N -0.349 5.349 8 C 0.010 3.990 9 H 0.119 0.881 10 C -0.178 4.178 11 C 0.023 3.977 12 H 0.123 0.877 13 N -0.343 5.343 14 C 0.402 3.598 15 O -0.489 6.489 16 O -0.282 6.282 17 C 0.056 3.944 18 C -0.115 4.115 19 C -0.121 4.121 20 C -0.147 4.147 21 C -0.131 4.131 22 C -0.150 4.150 23 C -0.125 4.125 24 C -0.185 4.185 25 C -0.224 4.224 26 C -0.131 4.131 27 C -0.146 4.146 28 O -0.350 6.350 29 Si 0.691 3.309 30 H 0.129 0.871 31 H 0.133 0.867 32 H 0.116 0.884 33 H 0.248 0.752 34 H 0.153 0.847 35 H 0.097 0.903 36 H 0.246 0.754 37 H 0.097 0.903 38 H 0.102 0.898 39 H 0.153 0.847 40 H 0.163 0.837 41 H 0.162 0.838 42 H 0.159 0.841 43 H 0.147 0.853 44 H 0.085 0.915 45 H 0.150 0.850 46 H 0.178 0.822 47 H 0.144 0.856 48 H 0.249 0.751 49 H -0.217 1.217 50 H -0.209 1.209 Dipole moment (debyes) X Y Z Total from point charges -5.683 -1.531 -2.323 6.327 hybrid contribution -0.067 -0.486 0.813 0.950 sum -5.750 -2.017 -1.510 6.278 Atomic orbital electron populations 1.22657 0.70431 1.06450 1.06600 1.45692 1.09022 1.01653 1.48230 1.73484 1.02475 1.14730 1.19105 1.21744 0.91014 0.94158 1.12835 1.16994 0.86387 0.81838 0.75408 1.90802 1.23778 1.77652 1.51278 1.45641 1.10488 1.04619 1.74126 1.22086 0.88801 0.89614 0.98478 0.88130 1.23778 1.04425 0.94357 0.95218 1.22085 0.80881 0.99597 0.95115 0.87700 1.44500 1.17262 1.09992 1.62515 1.18254 0.80289 0.84354 0.76933 1.90998 1.76081 1.18929 1.62868 1.86319 1.27441 1.41737 1.72684 1.21810 0.87172 0.86770 0.98622 1.19569 0.93781 1.03199 0.94936 1.21324 0.92792 0.98121 0.99835 1.21490 0.98144 0.98503 0.96572 1.21616 0.99443 0.98134 0.93915 1.21471 0.92913 0.99557 1.01098 1.21309 0.98759 0.97246 0.95219 1.23798 1.00682 0.97008 0.96977 1.21613 0.97293 0.93758 1.09771 1.22126 0.90622 0.92254 1.08144 1.24796 0.94778 0.92055 1.02993 1.86482 1.28913 1.88864 1.30779 0.93187 0.73502 0.75629 0.88541 0.87143 0.86666 0.88444 0.75207 0.84687 0.90259 0.75360 0.90262 0.89799 0.84720 0.83678 0.83794 0.84107 0.85250 0.91491 0.85045 0.82189 0.85573 0.75127 1.21736 1.20862 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 -0.63 10.11 127.77 1.29 0.66 16 2 N -0.26 0.26 3.70 -355.93 -1.32 -1.06 16 3 N -0.26 -0.80 11.67 -48.18 -0.56 -1.36 16 4 C -0.04 -0.24 7.13 42.46 0.30 0.07 16 5 C 0.61 4.47 7.83 86.75 0.68 5.15 16 6 O -0.56 -7.67 16.86 -3.92 -0.07 -7.74 16 7 N -0.70 -1.02 4.34 -443.02 -1.92 -2.94 16 8 C 0.11 -0.11 4.00 45.52 0.18 0.08 16 9 H 0.10 0.01 8.04 -2.39 -0.02 -0.01 16 10 C -0.14 0.51 7.57 31.12 0.24 0.75 16 11 C 0.13 -0.04 4.28 45.51 0.19 0.15 16 12 H 0.10 0.17 7.54 -2.39 -0.02 0.15 16 13 N -0.68 -1.59 4.97 -567.61 -2.82 -4.41 16 14 C 0.65 4.92 8.75 129.79 1.14 6.06 16 15 O -0.60 -7.92 15.77 19.81 0.31 -7.61 16 16 O -0.37 -2.36 10.25 -55.46 -0.57 -2.93 16 17 C 0.13 0.54 5.60 71.24 0.40 0.94 16 18 C -0.11 -0.35 5.52 -19.86 -0.11 -0.46 16 19 C -0.10 -0.11 9.70 22.27 0.22 0.11 16 20 C -0.13 0.11 10.05 22.27 0.22 0.33 16 21 C -0.11 0.11 10.05 22.27 0.22 0.33 16 22 C -0.13 -0.03 10.05 22.27 0.22 0.19 16 23 C -0.11 -0.24 9.70 22.27 0.22 -0.02 16 24 C -0.15 0.22 7.61 31.12 0.24 0.46 16 25 C -0.20 -0.83 9.35 22.41 0.21 -0.62 16 26 C -0.01 0.00 6.17 41.40 0.26 0.26 16 27 C -0.03 0.17 2.87 71.24 0.20 0.38 16 28 O -0.54 4.21 10.42 -148.98 -1.55 2.66 16 29 Si 0.79 -3.21 31.37 68.60 2.15 -1.06 16 30 H 0.11 -1.36 8.14 -2.39 -0.02 -1.38 16 31 H 0.11 -1.06 6.80 -2.39 -0.02 -1.07 16 32 H 0.10 -0.82 8.14 -2.39 -0.02 -0.84 16 33 H 0.41 -0.16 7.56 -92.71 -0.70 -0.87 16 34 H 0.14 -1.01 8.14 -2.39 -0.02 -1.03 16 35 H 0.08 -0.21 8.13 -2.39 -0.02 -0.23 16 36 H 0.41 0.41 7.31 -92.71 -0.68 -0.26 16 37 H 0.08 0.33 8.08 -2.39 -0.02 0.31 16 38 H 0.08 0.28 8.08 -2.39 -0.02 0.26 16 39 H 0.13 -0.24 8.06 -2.91 -0.02 -0.26 16 40 H 0.15 -0.76 8.06 -2.91 -0.02 -0.79 16 41 H 0.14 -0.77 8.06 -2.91 -0.02 -0.79 16 42 H 0.14 -0.50 8.06 -2.91 -0.02 -0.52 16 43 H 0.13 0.03 8.06 -2.91 -0.02 0.01 16 44 H 0.07 0.13 8.14 -2.39 -0.02 0.11 16 45 H 0.13 -0.67 8.14 -2.38 -0.02 -0.69 16 46 H 0.16 0.75 6.84 -2.91 -0.02 0.73 16 47 H 0.13 -0.61 7.96 -2.39 -0.02 -0.63 16 48 H 0.40 -5.90 8.70 -74.05 -0.64 -6.54 16 49 H -0.29 -0.82 6.83 99.48 0.68 -0.14 16 50 H -0.28 -0.45 7.11 99.48 0.71 0.25 16 Total: 0.00 -24.85 425.67 -1.02 -25.87 By element: Atomic # 1 Polarization: -13.24 SS G_CDS: -1.00 Total: -14.24 kcal Atomic # 6 Polarization: 8.49 SS G_CDS: 6.32 Total: 14.81 kcal Atomic # 7 Polarization: -3.14 SS G_CDS: -6.62 Total: -9.76 kcal Atomic # 8 Polarization: -13.74 SS G_CDS: -1.88 Total: -15.62 kcal Atomic # 14 Polarization: -3.21 SS G_CDS: 2.15 Total: -1.06 kcal Total: -24.85 -1.02 -25.87 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12109458_13259642.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 27.839 kcal (2) G-P(sol) polarization free energy of solvation -24.849 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 2.990 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.023 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.872 kcal (6) G-S(sol) free energy of system = (1) + (5) 1.967 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.62 seconds