Wall clock time and date at job start Thu Mar 4 2021 15:11:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45195 * 1 3 3 C 1.34224 * 117.00156 * 2 1 4 4 O 1.20825 * 119.99929 * 0.02562 * 3 2 1 5 5 C 1.50700 * 120.00148 * 180.02562 * 3 2 1 6 6 H 1.09001 * 112.84701 * 311.19554 * 5 3 2 7 7 C 1.53779 * 113.69086 * 82.45964 * 5 3 2 8 8 C 1.53790 * 87.07826 * 139.99311 * 7 5 3 9 9 H 1.08997 * 113.68686 * 89.12714 * 8 7 5 10 10 N 1.46497 * 113.61449 * 220.02089 * 8 7 5 11 11 C 1.46494 * 120.00255 * 37.49673 * 10 8 7 12 12 C 1.34782 * 119.99985 * 217.49996 * 10 8 7 13 13 O 1.21595 * 119.99521 * 4.69671 * 12 10 8 14 14 C 1.47568 * 119.99959 * 184.69840 * 12 10 8 15 15 C 1.36499 * 120.01169 * 280.19031 * 14 12 10 16 16 N 1.35942 * 120.50325 * 180.23322 * 15 14 12 17 17 C 1.37004 * 132.40544 * 180.36931 * 16 15 14 18 18 C 1.50699 * 126.43061 * 359.34110 * 17 16 15 19 19 O 1.42903 * 109.47089 * 30.24725 * 18 17 16 20 20 Si 1.86302 * 109.47335 * 150.25013 * 18 17 16 21 21 C 1.35011 * 107.14516 * 179.57192 * 17 16 15 22 22 N 1.33590 * 108.65064 * 359.76737 * 21 17 16 23 23 C 1.32416 * 109.22550 * 0.02562 * 22 21 17 24 24 C 1.41247 * 132.12112 * 179.97438 * 23 22 21 25 25 Br 1.89103 * 120.25392 * 359.97438 * 24 23 22 26 26 C 1.35697 * 119.49312 * 180.02562 * 24 23 22 27 27 C 1.53778 * 113.61333 * 180.02562 * 5 3 2 28 28 H 1.09008 * 109.47427 * 300.00115 * 1 2 3 29 29 H 1.08999 * 109.47204 * 59.99831 * 1 2 3 30 30 H 1.08999 * 109.47376 * 180.02562 * 1 2 3 31 31 H 1.09000 * 113.61612 * 25.45146 * 7 5 3 32 32 H 1.08998 * 113.61753 * 254.54180 * 7 5 3 33 33 H 1.09005 * 109.47177 * 274.04604 * 11 10 8 34 34 H 1.09004 * 109.47225 * 34.04261 * 11 10 8 35 35 H 1.08999 * 109.47547 * 154.04344 * 11 10 8 36 36 H 1.07998 * 119.74546 * 359.96161 * 15 14 12 37 37 H 1.08999 * 109.47004 * 270.25316 * 18 17 16 38 38 H 0.96701 * 113.99326 * 60.00091 * 19 18 17 39 39 H 1.48501 * 110.00117 * 58.68161 * 20 18 17 40 40 H 1.48497 * 109.99775 * 180.02562 * 20 18 17 41 41 H 1.07997 * 125.67605 * 179.76945 * 21 17 16 42 42 H 1.08001 * 120.23845 * 180.02562 * 26 24 23 43 43 H 1.09002 * 113.61785 * 105.38966 * 27 5 3 44 44 H 1.09000 * 113.61574 * 334.47826 * 27 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4519 0.0000 0.0000 3 6 2.0613 1.1959 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2748 -0.0006 6 1 4.0238 0.6361 0.7549 7 6 4.1924 1.1229 -1.3969 8 6 5.1820 2.2264 -0.9869 9 1 6.0818 1.8492 -0.5010 10 7 5.4721 3.1823 -2.0585 11 6 4.4085 3.6003 -2.9750 12 6 6.7177 3.6771 -2.2012 13 8 7.6193 3.2667 -1.4960 14 6 6.9871 4.7168 -3.2132 15 6 7.1486 4.3689 -4.5232 16 7 7.4018 5.3179 -5.4630 17 6 7.5954 5.2484 -6.8175 18 6 7.5862 3.9988 -7.6598 19 8 6.7060 3.0367 -7.0752 20 14 6.9998 4.4130 -9.3790 21 6 7.8012 6.5088 -7.2553 22 7 7.7336 7.3400 -6.2117 23 6 7.4896 6.6418 -5.1133 24 6 7.3266 7.0253 -3.7637 25 35 7.4528 8.8460 -3.2686 26 6 7.0799 6.0771 -2.8249 27 6 4.1077 2.7141 0.0001 28 1 -0.3634 0.5139 0.8900 29 1 -0.3633 0.5139 -0.8900 30 1 -0.3634 -1.0276 0.0005 31 1 3.5256 1.4140 -2.2085 32 1 4.6630 0.1535 -1.5613 33 1 4.3338 2.8859 -3.7949 34 1 3.4604 3.6378 -2.4384 35 1 4.6397 4.5881 -3.3736 36 1 7.0790 3.3313 -4.8145 37 1 8.5940 3.5865 -7.7091 38 1 5.7899 3.3367 -6.9996 39 1 7.8886 5.4362 -9.9860 40 1 6.9856 3.1889 -10.2194 41 1 7.9891 6.7972 -8.2790 42 1 6.9529 6.3569 -1.7895 43 1 4.5099 3.0289 0.9631 44 1 3.4177 3.4404 -0.4294 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_12109654_12335884.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 15:11:05 Heat of formation + Delta-G solvation = -4.720912 kcal Electronic energy + Delta-G solvation = -32657.574565 eV Core-core repulsion = 28012.464790 eV Total energy + Delta-G solvation = -4645.109775 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 424.051 amu Computer time = 1.39 seconds Orbital eigenvalues (eV) -44.25489 -42.13652 -41.24729 -39.50708 -38.40988 -37.97656 -37.44994 -35.69105 -35.29580 -32.58552 -31.79407 -30.38721 -29.44701 -28.19234 -27.13602 -26.90564 -26.75927 -25.35503 -24.08377 -22.90311 -22.33395 -21.03166 -20.20127 -19.37230 -19.13736 -18.67318 -18.16016 -17.89502 -17.67739 -17.48803 -17.41204 -16.95808 -16.33198 -16.20965 -16.04142 -15.86676 -15.77519 -15.48859 -15.01827 -14.66394 -14.37948 -14.23278 -14.20247 -14.03674 -13.63158 -13.52451 -13.40349 -13.32896 -13.22279 -13.04210 -12.93277 -12.69075 -12.49338 -12.23404 -12.13932 -11.82894 -11.73043 -11.54810 -11.45135 -11.36482 -11.29333 -11.20975 -10.85780 -10.03006 -9.83913 -9.07781 -4.93378 -0.82829 -0.28195 0.18179 0.89152 1.08181 1.20291 1.35372 1.48228 1.68233 1.72151 1.89290 2.00274 2.05641 2.81865 2.94583 3.12843 3.20305 3.35076 3.36277 3.47654 3.48726 3.64030 3.75576 3.84183 4.03516 4.11044 4.12742 4.27217 4.28381 4.30715 4.35712 4.40486 4.48931 4.52421 4.54343 4.56883 4.63211 4.71276 4.77386 4.89201 4.93560 4.96334 5.11177 5.28610 5.34006 5.40635 5.59709 6.07536 6.46861 6.55389 6.67125 6.78602 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.362 6.362 3 C 0.472 3.528 4 O -0.537 6.537 5 C -0.106 4.106 6 H 0.151 0.849 7 C -0.118 4.118 8 C 0.121 3.879 9 H 0.125 0.875 10 N -0.585 5.585 11 C 0.063 3.937 12 C 0.582 3.418 13 O -0.556 6.556 14 C -0.152 4.152 15 C 0.137 3.863 16 N -0.350 5.350 17 C -0.077 4.077 18 C -0.037 4.037 19 O -0.550 6.550 20 Si 0.804 3.196 21 C 0.032 3.968 22 N -0.496 5.496 23 C 0.225 3.775 24 C -0.074 4.074 25 Br -0.001 7.001 26 C -0.024 4.024 27 C -0.132 4.132 28 H 0.059 0.941 29 H 0.063 0.937 30 H 0.127 0.873 31 H 0.100 0.900 32 H 0.106 0.894 33 H 0.087 0.913 34 H 0.083 0.917 35 H 0.078 0.922 36 H 0.201 0.799 37 H 0.119 0.881 38 H 0.397 0.603 39 H -0.274 1.274 40 H -0.286 1.286 41 H 0.205 0.795 42 H 0.167 0.833 43 H 0.088 0.912 44 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.185 -5.513 -2.431 8.634 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.278 6.278 3 C 0.316 3.684 4 O -0.426 6.426 5 C -0.125 4.125 6 H 0.168 0.832 7 C -0.156 4.156 8 C 0.018 3.982 9 H 0.142 0.858 10 N -0.315 5.315 11 C -0.078 4.078 12 C 0.368 3.632 13 O -0.434 6.434 14 C -0.159 4.159 15 C 0.012 3.988 16 N -0.023 5.023 17 C -0.188 4.188 18 C -0.146 4.146 19 O -0.357 6.357 20 Si 0.705 3.295 21 C -0.118 4.118 22 N -0.215 5.215 23 C -0.020 4.020 24 C -0.157 4.157 25 Br 0.085 6.915 26 C -0.050 4.050 27 C -0.170 4.170 28 H 0.077 0.923 29 H 0.082 0.918 30 H 0.145 0.855 31 H 0.119 0.881 32 H 0.125 0.875 33 H 0.106 0.894 34 H 0.102 0.898 35 H 0.097 0.903 36 H 0.218 0.782 37 H 0.137 0.863 38 H 0.248 0.752 39 H -0.200 1.200 40 H -0.213 1.213 41 H 0.222 0.778 42 H 0.184 0.816 43 H 0.107 0.893 44 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges -5.068 -4.282 -2.827 7.212 hybrid contribution 0.242 -0.867 0.634 1.101 sum -4.827 -5.149 -2.192 7.390 Atomic orbital electron populations 1.23516 0.75090 1.05533 1.02449 1.86521 1.24680 1.33154 1.83460 1.23950 0.92426 0.81001 0.70994 1.90675 1.67862 1.37407 1.46691 1.22414 0.86037 1.01227 1.02817 0.83174 1.23354 0.96972 1.00701 0.94539 1.22663 0.98239 0.89417 0.87922 0.85752 1.47765 1.08740 1.43275 1.31697 1.22120 0.90456 1.01619 0.93649 1.17741 0.82768 0.80539 0.82149 1.90868 1.45225 1.60382 1.46876 1.19175 1.09642 0.94266 0.92827 1.22127 0.94657 0.95674 0.86352 1.42638 1.44657 1.07546 1.07416 1.22315 1.15692 0.99842 0.80998 1.25053 0.98344 0.85201 1.06045 1.86454 1.23883 1.41149 1.84247 0.93130 0.88672 0.78162 0.69528 1.22828 1.01505 0.87671 0.99748 1.70816 1.21223 1.32299 0.97170 1.20497 1.06084 0.80550 0.94846 1.20471 1.10505 0.94163 0.90526 1.96831 1.97048 1.06818 1.90825 1.21072 0.94079 0.89438 1.00458 1.23461 0.97312 0.94999 1.01232 0.92255 0.91809 0.85517 0.88120 0.87514 0.89441 0.89849 0.90315 0.78207 0.86328 0.75217 1.20029 1.21270 0.77832 0.81579 0.89340 0.88706 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.10 10.56 113.37 1.20 1.10 16 2 O -0.36 0.06 10.56 -51.36 -0.54 -0.48 16 3 C 0.47 0.22 7.49 71.24 0.53 0.75 16 4 O -0.54 -3.56 15.65 21.97 0.34 -3.22 16 5 C -0.11 0.60 4.25 -11.02 -0.05 0.56 16 6 H 0.15 -1.39 8.14 -2.39 -0.02 -1.41 16 7 C -0.12 0.97 7.09 31.12 0.22 1.19 16 8 C 0.12 -0.62 4.22 45.54 0.19 -0.43 16 9 H 0.12 -0.37 7.21 -2.39 -0.02 -0.39 16 10 N -0.58 2.65 3.08 -823.26 -2.54 0.11 16 11 C 0.06 -0.60 8.73 127.77 1.12 0.52 16 12 C 0.58 0.55 7.05 86.70 0.61 1.17 16 13 O -0.56 -5.09 16.59 -4.02 -0.07 -5.16 16 14 C -0.15 0.08 3.74 -20.35 -0.08 0.01 16 15 C 0.14 -0.31 9.73 83.65 0.81 0.50 16 16 N -0.35 -0.31 2.93 -337.71 -0.99 -1.30 16 17 C -0.08 0.10 6.24 41.01 0.26 0.36 16 18 C -0.04 0.22 3.06 71.24 0.22 0.43 16 19 O -0.55 4.27 10.90 -148.98 -1.62 2.64 16 20 Si 0.80 -6.04 31.34 68.60 2.15 -3.89 16 21 C 0.03 0.06 10.44 83.68 0.87 0.93 16 22 N -0.50 -3.89 11.30 -194.10 -2.19 -6.09 16 23 C 0.23 1.30 7.59 134.18 1.02 2.32 16 24 C -0.07 -0.32 6.24 22.42 0.14 -0.18 16 25 Br 0.00 0.00 33.72 -20.37 -0.69 -0.69 16 26 C -0.02 -0.02 9.54 22.55 0.22 0.19 16 27 C -0.13 0.59 6.96 31.13 0.22 0.80 16 28 H 0.06 -0.14 8.13 -2.38 -0.02 -0.16 16 29 H 0.06 -0.22 8.13 -2.39 -0.02 -0.23 16 30 H 0.13 -1.09 8.14 -2.39 -0.02 -1.11 16 31 H 0.10 -0.91 6.74 -2.39 -0.02 -0.93 16 32 H 0.11 -1.10 8.14 -2.39 -0.02 -1.11 16 33 H 0.09 -1.16 8.10 -2.38 -0.02 -1.18 16 34 H 0.08 -0.76 6.52 -2.38 -0.02 -0.78 16 35 H 0.08 -0.73 6.58 -2.39 -0.02 -0.74 16 36 H 0.20 -1.21 6.69 -2.91 -0.02 -1.23 16 37 H 0.12 -0.57 7.96 -2.39 -0.02 -0.59 16 38 H 0.40 -6.11 8.70 -74.06 -0.64 -6.75 16 39 H -0.27 0.86 6.80 99.48 0.68 1.54 16 40 H -0.29 0.24 7.11 99.48 0.71 0.95 16 41 H 0.21 -0.60 6.70 -2.91 -0.02 -0.62 16 42 H 0.17 -0.25 8.06 -2.91 -0.02 -0.28 16 43 H 0.09 -0.39 8.14 -2.39 -0.02 -0.41 16 44 H 0.09 -0.21 6.17 -2.39 -0.01 -0.23 16 Total: 0.00 -25.32 391.20 1.79 -23.52 By element: Atomic # 1 Polarization: -16.11 SS G_CDS: 0.44 Total: -15.67 kcal Atomic # 6 Polarization: 2.72 SS G_CDS: 7.50 Total: 10.22 kcal Atomic # 7 Polarization: -1.56 SS G_CDS: -5.72 Total: -7.28 kcal Atomic # 8 Polarization: -4.32 SS G_CDS: -1.89 Total: -6.21 kcal Atomic # 14 Polarization: -6.04 SS G_CDS: 2.15 Total: -3.89 kcal Atomic # 35 Polarization: 0.00 SS G_CDS: -0.69 Total: -0.69 kcal Total: -25.32 1.79 -23.52 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12109654_12335884.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 18.803 kcal (2) G-P(sol) polarization free energy of solvation -25.315 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -6.512 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.791 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.524 kcal (6) G-S(sol) free energy of system = (1) + (5) -4.721 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.39 seconds