Wall clock time and date at job start Thu Mar 4 2021 15:11:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45201 * 1 3 3 C 1.34228 * 117.00096 * 2 1 4 4 O 1.20829 * 120.00116 * 359.97438 * 3 2 1 5 5 C 1.50703 * 119.99996 * 179.97438 * 3 2 1 6 6 H 1.08993 * 112.84937 * 311.18937 * 5 3 2 7 7 C 1.53954 * 113.74022 * 82.40066 * 5 3 2 8 8 C 1.53786 * 87.02093 * 139.94371 * 7 5 3 9 9 H 1.08994 * 113.61296 * 89.22255 * 8 7 5 10 10 N 1.46497 * 113.61368 * 220.04589 * 8 7 5 11 11 C 1.46504 * 120.00180 * 39.13795 * 10 8 7 12 12 C 1.34773 * 120.00038 * 219.13068 * 10 8 7 13 13 O 1.21573 * 119.99978 * 3.49001 * 12 10 8 14 14 C 1.47709 * 120.00124 * 183.49066 * 12 10 8 15 15 N 1.31808 * 126.51811 * 353.74321 * 14 12 10 16 16 N 1.28469 * 110.07194 * 180.13050 * 15 14 12 17 17 C 1.46494 * 124.88412 * 179.88858 * 16 15 14 18 18 C 1.35036 * 110.22941 * 359.62409 * 16 15 14 19 19 C 1.50700 * 126.38233 * 180.20682 * 18 16 15 20 20 O 1.42902 * 109.47274 * 29.99839 * 19 18 16 21 21 Si 1.86305 * 109.47186 * 149.99971 * 19 18 16 22 22 C 1.35360 * 107.22938 * 0.22750 * 18 16 15 23 23 C 1.53787 * 113.61041 * 179.97438 * 5 3 2 24 24 H 1.09002 * 109.47148 * 180.02562 * 1 2 3 25 25 H 1.08991 * 109.47247 * 300.00887 * 1 2 3 26 26 H 1.09001 * 109.46398 * 60.00452 * 1 2 3 27 27 H 1.09002 * 113.61865 * 25.42161 * 7 5 3 28 28 H 1.09007 * 113.66265 * 254.46688 * 7 5 3 29 29 H 1.09000 * 109.46819 * 264.08688 * 11 10 8 30 30 H 1.09000 * 109.46831 * 24.08288 * 11 10 8 31 31 H 1.08999 * 109.47008 * 144.08884 * 11 10 8 32 32 H 1.09003 * 109.47345 * 269.69602 * 17 16 15 33 33 H 1.09003 * 109.47572 * 149.69966 * 17 16 15 34 34 H 1.09003 * 109.47451 * 29.69925 * 17 16 15 35 35 H 1.09002 * 109.47063 * 269.99854 * 19 18 16 36 36 H 0.96704 * 114.00031 * 179.97438 * 20 19 18 37 37 H 1.48498 * 109.99900 * 178.67936 * 21 19 18 38 38 H 1.48502 * 109.99990 * 300.00133 * 21 19 18 39 39 H 1.08005 * 127.24729 * 179.97438 * 22 18 16 40 40 H 1.09000 * 113.61219 * 105.39175 * 23 5 3 41 41 H 1.08993 * 113.69369 * 334.49427 * 23 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4034 2.2094 -0.0005 5 6 3.5664 1.2748 0.0006 6 1 4.0233 0.6366 0.7567 7 6 4.1956 1.1208 -1.3960 8 6 5.1829 2.2260 -0.9849 9 1 6.0823 1.8490 -0.4982 10 7 5.4738 3.1814 -2.0568 11 6 4.4034 3.6247 -2.9534 12 6 6.7262 3.6525 -2.2179 13 8 7.6270 3.2373 -1.5150 14 6 7.0043 4.6735 -3.2485 15 7 6.1581 5.1273 -4.1514 16 7 6.7321 6.0073 -4.8907 17 6 6.0896 6.7193 -5.9981 18 6 8.0112 6.1858 -4.4965 19 6 9.0110 7.1336 -5.1073 20 8 8.3259 8.2658 -5.6469 21 14 10.2105 7.6992 -3.7988 22 6 8.2282 5.3542 -3.4507 23 6 4.1078 2.7142 -0.0001 24 1 -0.3633 -1.0277 0.0005 25 1 -0.3633 0.5139 0.8898 26 1 -0.3632 0.5138 -0.8901 27 1 3.5300 1.4103 -2.2092 28 1 4.6679 0.1520 -1.5587 29 1 4.4167 3.0214 -3.8611 30 1 3.4409 3.5098 -2.4549 31 1 4.5563 4.6726 -3.2114 32 1 6.2331 6.1592 -6.9222 33 1 6.5343 7.7092 -6.1005 34 1 5.0231 6.8193 -5.7958 35 1 9.5548 6.6248 -5.9032 36 1 8.9088 8.9195 -6.0569 37 1 11.2208 8.6095 -4.3953 38 1 9.4814 8.3945 -2.7078 39 1 9.1430 5.2351 -2.8890 40 1 4.5092 3.0302 0.9628 41 1 3.4190 3.4410 -0.4307 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_12109654_13259642.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 15:11:10 Heat of formation + Delta-G solvation = -17.248015 kcal Electronic energy + Delta-G solvation = -25965.973910 eV Core-core repulsion = 22044.817343 eV Total energy + Delta-G solvation = -3921.156567 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 310.141 amu Computer time = 0.75 seconds Orbital eigenvalues (eV) -43.84118 -42.06413 -40.86768 -39.13356 -38.09249 -37.47208 -35.71092 -34.29225 -32.73374 -29.63669 -28.62924 -28.16560 -27.10199 -26.80270 -26.45061 -24.30132 -22.38228 -21.83080 -20.47359 -20.19358 -18.88173 -18.65610 -18.19212 -18.08103 -17.60380 -17.45684 -17.39589 -16.57509 -16.36596 -16.18017 -15.95552 -15.23938 -14.90524 -14.79464 -14.41801 -14.26115 -14.22546 -14.02044 -13.69212 -13.54568 -13.48890 -13.34322 -13.26709 -12.98035 -12.86455 -12.47408 -12.31392 -12.22886 -11.85651 -11.75103 -11.63156 -11.43221 -11.23045 -10.96942 -10.18608 -9.87220 -9.69379 -4.88085 0.42687 0.80619 1.04708 1.27180 1.50150 1.61190 1.70041 1.97837 2.02542 2.23985 2.93952 3.14600 3.23549 3.34126 3.51860 3.64491 3.74780 3.89984 4.03584 4.20148 4.26413 4.28285 4.30253 4.37140 4.38012 4.46449 4.52181 4.54523 4.59177 4.63211 4.67143 4.68547 4.79270 4.84783 4.89547 4.92374 5.15141 5.26777 5.32406 5.50311 5.73765 6.19822 6.49675 6.64165 6.76761 7.04285 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.361 6.361 3 C 0.472 3.528 4 O -0.538 6.538 5 C -0.101 4.101 6 H 0.156 0.844 7 C -0.120 4.120 8 C 0.120 3.880 9 H 0.128 0.872 10 N -0.591 5.591 11 C 0.076 3.924 12 C 0.601 3.399 13 O -0.561 6.561 14 C -0.039 4.039 15 N -0.262 5.262 16 N -0.268 5.268 17 C 0.071 3.929 18 C 0.026 3.974 19 C -0.046 4.046 20 O -0.553 6.553 21 Si 0.776 3.224 22 C -0.190 4.190 23 C -0.132 4.132 24 H 0.129 0.871 25 H 0.060 0.940 26 H 0.061 0.939 27 H 0.092 0.908 28 H 0.108 0.892 29 H 0.064 0.936 30 H 0.076 0.924 31 H 0.090 0.910 32 H 0.097 0.903 33 H 0.127 0.873 34 H 0.098 0.902 35 H 0.117 0.883 36 H 0.406 0.594 37 H -0.266 1.266 38 H -0.311 1.311 39 H 0.184 0.816 40 H 0.091 0.909 41 H 0.088 0.912 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.302 -0.399 -5.088 5.267 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.277 6.277 3 C 0.317 3.683 4 O -0.428 6.428 5 C -0.120 4.120 6 H 0.174 0.826 7 C -0.158 4.158 8 C 0.016 3.984 9 H 0.146 0.854 10 N -0.321 5.321 11 C -0.066 4.066 12 C 0.389 3.611 13 O -0.438 6.438 14 C -0.196 4.196 15 N -0.100 5.100 16 N -0.056 5.056 17 C -0.067 4.067 18 C -0.099 4.099 19 C -0.156 4.156 20 O -0.365 6.365 21 Si 0.679 3.321 22 C -0.218 4.218 23 C -0.170 4.170 24 H 0.147 0.853 25 H 0.079 0.921 26 H 0.080 0.920 27 H 0.110 0.890 28 H 0.126 0.874 29 H 0.083 0.917 30 H 0.094 0.906 31 H 0.108 0.892 32 H 0.115 0.885 33 H 0.144 0.856 34 H 0.116 0.884 35 H 0.134 0.866 36 H 0.259 0.741 37 H -0.191 1.191 38 H -0.239 1.239 39 H 0.201 0.799 40 H 0.109 0.891 41 H 0.106 0.894 Dipole moment (debyes) X Y Z Total from point charges 0.198 -0.019 -4.589 4.593 hybrid contribution -0.173 1.103 -0.468 1.211 sum 0.026 1.084 -5.057 5.172 Atomic orbital electron populations 1.23529 0.75055 1.05624 1.02413 1.86522 1.24726 1.32983 1.83449 1.23945 0.92401 0.81036 0.70942 1.90671 1.67872 1.37487 1.46758 1.22435 0.86047 1.00980 1.02564 0.82625 1.23391 0.97065 1.00811 0.94536 1.22672 0.98321 0.89415 0.87959 0.85411 1.47669 1.08425 1.43738 1.32298 1.22131 0.89482 1.02201 0.92799 1.17151 0.82520 0.79966 0.81454 1.90762 1.45345 1.60213 1.47524 1.21761 0.93832 1.03780 1.00246 1.73668 1.24653 1.06209 1.05477 1.45843 1.08386 1.27243 1.24154 1.22770 1.00022 0.98576 0.85375 1.21172 0.87705 1.02052 0.99018 1.24447 0.97200 0.87431 1.06542 1.86341 1.38068 1.33758 1.78363 0.93358 0.77193 0.86009 0.75534 1.21620 1.00035 1.00213 0.99933 1.23434 0.97301 0.95044 1.01250 0.85296 0.92125 0.92027 0.88989 0.87359 0.91733 0.90553 0.89156 0.88485 0.85556 0.88378 0.86581 0.74088 1.19101 1.23890 0.79892 0.89084 0.89369 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.56 113.37 1.20 1.18 16 2 O -0.36 -1.10 10.57 -51.40 -0.54 -1.65 16 3 C 0.47 2.14 7.49 71.24 0.53 2.67 16 4 O -0.54 -5.84 15.65 21.95 0.34 -5.50 16 5 C -0.10 0.11 4.26 -10.95 -0.05 0.06 16 6 H 0.16 -0.91 8.14 -2.39 -0.02 -0.93 16 7 C -0.12 0.23 7.06 31.18 0.22 0.45 16 8 C 0.12 0.23 4.22 45.51 0.19 0.42 16 9 H 0.13 0.37 7.20 -2.39 -0.02 0.35 16 10 N -0.59 -3.25 3.08 -823.25 -2.54 -5.79 16 11 C 0.08 0.19 8.34 127.77 1.07 1.26 16 12 C 0.60 6.30 7.68 86.75 0.67 6.96 16 13 O -0.56 -8.53 16.40 -3.94 -0.06 -8.60 16 14 C -0.04 -0.34 6.82 42.46 0.29 -0.05 16 15 N -0.26 -1.74 8.50 -48.18 -0.41 -2.15 16 16 N -0.27 -0.92 3.70 -355.93 -1.32 -2.23 16 17 C 0.07 -0.25 11.00 127.77 1.41 1.15 16 18 C 0.03 0.06 6.21 41.40 0.26 0.32 16 19 C -0.05 0.21 2.98 71.24 0.21 0.42 16 20 O -0.55 3.06 9.76 -148.98 -1.45 1.60 16 21 Si 0.78 -2.79 31.24 68.60 2.14 -0.65 16 22 C -0.19 -1.02 9.36 22.41 0.21 -0.81 16 23 C -0.13 -0.19 6.91 31.11 0.21 0.03 16 24 H 0.13 -0.82 8.14 -2.39 -0.02 -0.84 16 25 H 0.06 0.00 8.13 -2.39 -0.02 -0.02 16 26 H 0.06 -0.02 8.13 -2.39 -0.02 -0.04 16 27 H 0.09 -0.11 6.63 -2.39 -0.02 -0.13 16 28 H 0.11 -0.51 8.14 -2.38 -0.02 -0.53 16 29 H 0.06 0.09 8.14 -2.39 -0.02 0.07 16 30 H 0.08 0.08 6.11 -2.39 -0.01 0.07 16 31 H 0.09 0.41 5.35 -2.39 -0.01 0.39 16 32 H 0.10 -0.63 8.14 -2.39 -0.02 -0.65 16 33 H 0.13 -0.59 5.19 -2.39 -0.01 -0.60 16 34 H 0.10 -0.48 8.14 -2.39 -0.02 -0.49 16 35 H 0.12 -1.11 7.96 -2.39 -0.02 -1.13 16 36 H 0.41 -5.54 8.74 -74.05 -0.65 -6.19 16 37 H -0.27 0.44 7.11 99.48 0.71 1.14 16 38 H -0.31 -2.06 7.11 99.48 0.71 -1.35 16 39 H 0.18 0.25 7.03 -2.91 -0.02 0.23 16 40 H 0.09 0.05 8.14 -2.39 -0.02 0.03 16 41 H 0.09 0.41 6.20 -2.39 -0.01 0.40 16 Total: 0.00 -24.17 339.67 3.04 -21.13 By element: Atomic # 1 Polarization: -10.69 SS G_CDS: 0.46 Total: -10.23 kcal Atomic # 6 Polarization: 7.64 SS G_CDS: 6.42 Total: 14.06 kcal Atomic # 7 Polarization: -5.91 SS G_CDS: -4.26 Total: -10.17 kcal Atomic # 8 Polarization: -12.42 SS G_CDS: -1.72 Total: -14.14 kcal Atomic # 14 Polarization: -2.79 SS G_CDS: 2.14 Total: -0.65 kcal Total: -24.17 3.04 -21.13 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12109654_13259642.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 3.885 kcal (2) G-P(sol) polarization free energy of solvation -24.175 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -20.290 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 3.042 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.133 kcal (6) G-S(sol) free energy of system = (1) + (5) -17.248 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.75 seconds